Array 1 6629-146 **** Predicted by CRISPRDetect 2.4 *** >NZ_NIPZ01000004.1 Paracoccus yeei strain G1212 G1212_contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================== ================== 6628 31 100.0 37 ............................... AACCAATACGTCCCCGATACCGCCCTCGGTCCTGGGG 6560 31 100.0 36 ............................... ACCACAAGACCAAGAACGAGCCCATCCATCCCGGCG 6493 31 100.0 34 ............................... TGACGCTTTGGTGCGCCGCCCTGCGGGGCGGCCG 6428 31 100.0 35 ............................... TGACGCTTTGGTGCGCCGCCCTGCGGGGCGGCCAG 6362 31 100.0 36 ............................... CCTGGCGCCATGGAGCGTGTTGCCCATGCCGGCGCG 6295 31 100.0 36 ............................... ACCCAGATGCGCGTCGATCACCGCCAGGGCCGGCGG 6228 31 100.0 34 ............................... TCGCAACGGAAGAAAATCTTCTGACGCTGCTAAG 6163 31 100.0 38 ............................... ATGTCACGTCTGCTGAAACGCTTGCCGATCAAGCCGGG 6094 31 100.0 36 ............................... ACCGGGTCGCGGGTATCGAGGACGCCGTAAGGGTCG 6027 31 100.0 34 ............................... GTCGCCAAAGCACTGGACTGGCGCTGATGTGATG 5962 31 100.0 35 ............................... AGCGCCAGCTTGGAGGCGGCGCGGATGTTCTGCAG 5896 31 100.0 36 ............................... ATCGGAAATGCCTGGGCGTGAGATGGTGGCAGGTCG 5829 31 100.0 38 ............................... CGTTGGTAGGCATGGTCTATCCTCTCTTGCGCAGGGCG 5760 31 100.0 36 ............................... ACCTATTATTCGTTTCAAAAACAAAGGTGAATTGGG 5693 31 100.0 37 ............................... ATCACGAGGGGCGGCAGGTCCTTGCGGCGGTCGGGCG 5625 31 100.0 37 ............................... ACAGCGAACGATCAGTGCATCTGGGTATTTGCGCAGG 5557 31 100.0 36 ............................... TGCTTCACGGGTGCGGCCTTTTTCCCGGTCGGGAGG 5490 31 100.0 35 ............................... GTTGTGGTCGGCATCCTCTTTCCACTCCGCGTCCG 5424 31 100.0 36 ............................... CTTACACGATTTACAGGGTGGCATGATGGACTTGGG 5357 31 100.0 35 ............................... ATCGACGAAATCCCCGCCGACTGGCCGATGCTTGG 5291 31 100.0 35 ............................... CACCAATCCTATACTCTGGATTGCGGAGCCAATGG 5225 31 100.0 35 ............................... TTCCGGGATCAGCAGCAGCCTTGCCCGTAGCCCGG 5159 31 100.0 35 ............................... TTGTCCATCGTGCCGGCGCTCGTGATGCCGACGAG 5093 31 100.0 36 ............................... CACGAAATCGCGTCCCGCCTGCGCGCCTTCACCGCG 5026 31 100.0 36 ............................... CAGCCGTCCAGACGGATGAAAGCAGCCTGCGCGCCG 4959 31 100.0 38 ............................... TTTTTGACCGCGAAAGCCTGTCAGGGCATCCTCCGCCG 4890 31 100.0 37 ............................... CATCGTCGAGCTGCCCCACCCGGCCATGCGGGTCATG 4822 31 100.0 38 ............................... ACCGCTATCCCGTGGCGCCGCAAGCCTGCTGATCAGGG 4753 31 100.0 36 ............................... CGACTGAGCAGACTGCCACGATGACGCCTGAGGAGG 4686 31 100.0 36 ............................... ATCTCCGCTCTTGCACAATCCATGATCCTCAGCGGG 4619 31 100.0 37 ............................... CAACATCCAACCAACCAAGAGGAAACCCCTGAAATGG 4551 31 100.0 38 ............................... GCCGATGACAGGCGGCGTCAGAAACCCCTGCTCGATCG 4482 31 100.0 36 ............................... GTGGAACACGAGACGGTGCCGGAACTGCGTGAGAAG 4415 31 100.0 39 ............................... CTTGTCCACCTGGTATCCGTCATCGAAATATCCGGCAGG 4345 31 100.0 36 ............................... TGCGTCAGGGGCGTGTTCGGGCTCGCGCCCAGCCCG 4278 31 100.0 36 ............................... CGGTGGCATAGCGCGATGCAGCTTGGAAGGGCGCGG 4211 31 100.0 36 ............................... CTTGATGTATTTGTCCTGGAGCGGCTGGAAGGTGTG 4144 31 100.0 38 ............................... CGACGATCTGCCCGCCTCCCACCGGCGTCGCCACGACG 4075 31 100.0 40 ............................... TGGTCTGACGCATAGGCGCGCACCACAATCGCGGGGGAGG 4004 31 100.0 35 ............................... GTATTCATCCGGCCCACTTCCAACGGCAACCCCGG 3938 31 100.0 35 ............................... CGTCTGCCGGTGCGCCGAATTGTTGCGGGGTCACG 3872 31 100.0 36 ............................... CTCGCCCTGTCCATGTGGTGGGGTGTGGCATGAAGG 3805 31 100.0 37 ............................... TCGCATATCCAAATCGATTCGGCAGTCACTACAGCCG 3737 31 100.0 35 ............................... ATGCGGATGATCGCGCCGATTTATGCGCTGATCGG 3671 31 100.0 38 ............................... CCCCGAGTTGGCATAGGTCAAGGACGCCGCGCCCACGG 3602 31 100.0 36 ............................... TCATTGGTCCAGGGCTCGCCCGGGATGCTCAAGAGG 3535 31 100.0 35 ............................... GACCCAGAGACCGGTAAGACTGCACCACTGACTGG 3469 31 100.0 35 ............................... AATGACGCGACCACGCAAGCCGGTCTGGATGCCTG 3403 31 100.0 35 ............................... TGGCAGATTGGTGCGACGAGCTGGAGCCCTGGCCG 3337 31 100.0 36 ............................... ATCGGTTGATCCTTTCGGGATAGGGCCCCTGCGGCG 3270 31 100.0 38 ............................... TGTTTGAAAAAGAGGGGGCAGAGCCGAGTCGCGGCCCG 3201 31 100.0 37 ............................... AACTCCGGTCAGATATTGCAACAAGGAAGCGAAGCGG 3133 31 100.0 36 ............................... AGCCGTAGAAACGATTCGCGAGCTTGCGCCGAAGCG 3066 31 100.0 38 ............................... CTTGATCTTCCGCAGCCACAGCCATTCCAGCATGTCGG 2997 31 100.0 36 ............................... GCGCCAGAGTGGCGACGAACAGCCGAACCTTCCAGG 2930 31 100.0 38 ............................... TCGTGGGCGCGGCGGCCCTGACCTATGCCAATTCGGGG 2861 31 100.0 37 ............................... TAACTGCACTTGGTGCGCAGAACACCCGGCAGGATGG 2793 31 100.0 36 ............................... GACGCAATGTCGAACGTCGAAACGCCGCGCGTGATG 2726 31 100.0 37 ............................... CCTCACCTCGATCAGCGGAACGTCCGGGACGGACCCG 2658 31 100.0 37 ............................... TTCGCTCTTTTCGGGATCATCTGTATCAGCCCTGATG 2590 31 100.0 36 ............................... GGTAGGGCAGGGATAGACGGACAGATCCTCTGCGCG 2523 31 100.0 37 ............................... CAGTCACGTCAGCTGCTGTCGCTGATCAACGCGACCG 2455 31 100.0 37 ............................... ACGAATGAATATGCGCTTGAACGCGGCGCAATCCCTG 2387 31 100.0 39 ............................... GGGAGGCCGAGGCATGACCGATACCTACGAATGGGACGG 2317 31 100.0 37 ............................... TTGCATCCAGCCGCGGAAAGTGGGTCCGAGACGGTCG 2249 31 100.0 36 ............................... CTCGCCGCTGGACAGGGACACAATGTCCACGCGCCG 2182 31 100.0 36 ............................... CTTGATATAGGCGGCTTCGTGCAGGACCCGGTTCTG 2115 31 100.0 34 ............................... CCGTCGGGCGCGGATCGCCTGCCCGATGCAGTCG 2050 31 100.0 36 ............................... CCGCCACCGCCCCCGCCGCCTGGAGCGGTCAGGCTG 1983 31 100.0 34 ............................... TGTACAGGTTCACCATCAACCAGCAACCTGCCTG 1918 31 100.0 38 ............................... ATCGCTGAAGGGGGTATGGAGTACCAGCAGCTAACGAG 1849 31 100.0 36 ............................... ATCAGGGTTTGCAGCGCATCGCCCAGCGGATCAAAG 1782 31 100.0 35 ............................... GCCAGCGGGCATCGGTCAGGTAGCCGGGCATATCG 1716 31 100.0 35 ............................... ACTGACGAGGAAATCTCGCAGACGGCCGATCATCG 1650 31 100.0 35 ............................... CCCATCCGAGACGAAAGAAACCGTTGCCTGTGCTG 1584 31 100.0 36 ............................... CACGCTCGTGGGCCATGCCGTGGACCCGGCCGGATG 1517 31 100.0 38 ............................... CTTGTAGCCTGCGCGGCGGTAGAGGCTTGCTGTCGCCG 1448 31 100.0 37 ............................... ATCGGCCAGCAGGGCGGCGCAGTGCAGCCAGAAGGCG 1380 31 96.8 46 ..............................T CGATCGAAAACCATCGTCAACCCGAAGGGCGGGGTTCCGAACGGGG 1303 31 100.0 36 ............................... CCCACCCTGCCGCAGGCCTGATGATGGAGGCGAGCG 1236 31 100.0 36 ............................... ATGTGGGTGATGAGCACGCAATCCCTGACGACCGGG 1169 31 100.0 35 ............................... GGGAACTGTCCAGCCCGAACGCCCAGCGGAAGAGG 1103 31 100.0 37 ............................... AGCGGCAGGGTCAGCACCTCCGATCGCAGGTTGCCCG 1035 31 100.0 36 ............................... CTGTCTCGCCCGGACCCAGATGCCATTTGACCATGG 968 31 100.0 36 ............................... AATGTCGTCCCGATCACCCATGGAGGCACCGGGGCG 901 31 100.0 36 ............................... TCCGCAGCGCTCTCAGCGTGGAAGCGAATTTGCAGG 834 31 100.0 34 ............................... AGCGCCTGTACGATCGTCGTCCGGTCGCGATCCA 769 31 100.0 34 ............................... TCCAGTGACATAGAACACGTCGTTGTCCCAGTCG 704 31 100.0 35 ............................... GCCCTCGGGTAGCTCCACGATCCTGTGGATGTGAC 638 31 100.0 35 ............................... AAGCTACATCGCCGTTTTTTTCCTCGGTGCACTTT 572 31 100.0 35 ............................... CTTGCCGTCGATGATCCGCTGCAAAAGGGCCACCG 506 31 100.0 35 ............................... GTATTTCCTGATCGGGTGATGGAAACTGGCGTCGT 440 31 100.0 35 ............................... ACCGGCACGGTCGCCCGCGGCGGCGCTGTGACGAC 374 31 100.0 36 ............................... CAGCGTGATCAGCGTGCCATAGGCGACGATGCCGGT 307 31 100.0 34 ............................... CTGGCGCAGCAGAACGGCGGGCCCCGCATGGGCG 242 31 100.0 35 ............................... AGGAAGGATTCGATCTGCCGGGCGTTGGCCAGCAG 176 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ============================================== ================== 97 31 100.0 36 GTCGCCCCCTCACGGGGGCGCGGATCGAAAC # Left flank : CGCCCTGGTTCTGGAGCTGAGATGCTGGTGCTGGTGACCTATGACGTGAACACGATGGAGGAGGGCGGCAAGAAACGCTTGCGCCAGGTCGCCCGCGCCTGCGAGGATTACGGCCAGCGGGTGCAGTTCTCGGTCTTCGAGATCGAGGTCGACCCGGCGCAATGGACACGGCTGAAGGCGCGGCTGGAAGGCATCATCCGCCCCGAGGTCGACAGCCTGCGTTATTACTATCTCGGCTCGAACTGGTCTCGCCGTGTCGAGCATGTCGGCGCCAAGCCCGCAACCGATCTGAACGGACCGCTGATCCTCTAGCGCCGGCACTGCGAACCCGAAGCGTGTCACCTTGGCCCGCCAGGTTCGCACATGGTTCTGCTGTTTGAAATCGTTCATCTTTCCGGCCAGCGGTGCAAGCATCCCGCCGTCTTTGCCTTGCAACCGAGCAACCTTCGCACTTCCGAGACAGATTGCGCAGCAAGAACCGCATTGTATAGCTGAGGGGG # Right flank : CTCCCACATGGACACGGTGACGCCTTTGAACCTGACCTGCCCCCCGCGAGATCCCTGGTTCATAACGAGAGTCTGCGGGTTTGGGATTGGTAGTCGGGCCGGTGGTTCTGGGCAAGCGCGCCGGGCGCGGAGCTCTCAAATTGCTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCCTCACGGGGGCGCGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCCCCCCTCGCGGGGGCGCGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.00,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //