Array 1 7235-6767 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGDY01000114.1 Bacillus thuringiensis serovar kumamtoensis strain BGSC 4W1 47559, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================== ============================================== ================== 7234 21 100.0 44 ..................... GCATATGGAGTAGAGGCATCGCGCGAACTGTGGTGGTTTAAAGC 7169 21 100.0 45 ..................... TGTGGAAGGTACGCTTTCTCACTGGGGACAATTCCAGTTTAGCAC 7103 21 100.0 43 ..................... AATATGTTGCCTTCTAAATGCTGAATTATTTCAAAGATAATGT 7039 21 81.0 46 ..G...T..G.T......... TAGGTCTTTTGTCTTGGTGATTCTCTACACTACGGCTAGTTAATGT 6972 21 85.7 34 ......TT.G........... TAGATATTTTATATCATTAAAAAGTGCTTAGCTT Deletion [6918] 6917 21 81.0 44 ......TG....C....G... TAGCTCAGCTGCAAATAATTTAGATGGGAATTTTCGTTTAACAT C [6912] 6851 21 95.2 43 ...T................. ATCCGTCTTAATGTTCTTCAATCGATTTTTATTTCTCTAAAAT 6787 21 95.2 0 ..G.................. | ========== ====== ====== ====== ===================== ============================================== ================== 8 21 92.3 43 TAACATAAGATGTATTTAAAT # Left flank : TAGTCAATGCGGATATATTTGTAAAGAAAATCGTTGTACACAAGCTGTTTTTGAATGTAAGCAGTGTGGATATAAAACACATGCTGATTATAATGCGGCGAAAAACATTTCTATCTATGACATCGAAAATATTATAAATAAACAATTAGCGGTACAAAGCAAATTGCATTCAAAAAAATGTATGGAAGAGTATATAGAAGAGTTAGGATACCTGGATTAATGTAGGTGATTGGGTTCCATATTAAATAATTTGGTGGATTTACACGCCATAAATGGAGAAGTAGCACATAAGAAATTTACCCAGTGCCAACACTCCGTAAGGTAGTATCAAATGTAAATAAACATTGATGCGTGGGCATTTTTCATGCTCTGAAGGGTGTAACACAAAGACCGTTACACAGTACATCTATTTGCTGGTAAAATAATGTTTAATGTTCATCTTATCAGTTTTTTTCCGCATCTGTTAAAGTAGCTATCTTTATTTCATTGGTATTTAACAC # Right flank : ATGTTTACAAAAAGCATTAAATTAAGCTAAGAAAGTGAATTTTATCAATACGTTTTTTTCTTTTACATATTAAAATGGAAGTACCCTTTCAATGCATACTGACCCCTTCACAAATCGTGAAGGGATTTTTTTATCCAATAAATGAGTTTTACAAAAGATACAAAATGTTAAATCTATAAAATCCAGTGATATCAGTATGCATGAGATCAATAGGTTTCTAATTGGATATTTAATGATGTGTTTTATAAAATATAAAAAGAAAATTCAAAACAAAACACCGCTTAACTGTAAGTGGCGATTCTTTTAATTACACTCTTTATTATAAAGAAAGATGAAATATAAAGGTCTAATGTAAAGTCCTTTACATTTCTTATCTAAAACTTTTGGAATATTTCATTTGGTGAATTATTTTAGGAAACGAATTTATATTTGTAACTATGTAAAAAAAGATAAACGTAACAAATTTGGTTTTATAAACACATCACGGTTTGAAATTACAT # Questionable array : NO Score: 4.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.61, 5:0, 6:-0.5, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:85.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 32749-32346 **** Predicted by CRISPRDetect 2.4 *** >NZ_PGDY01000108.1 Bacillus thuringiensis serovar kumamtoensis strain BGSC 4W1 47553, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 32748 28 100.0 38 ............................ GCAGACAGCCAAGCAACCATATGAGGAGGAATCTTAGG 32682 28 100.0 37 ............................ GCGTCCTCTTTTTATATAAAAGGAGGAACCTGGTAGG 32617 28 96.4 39 ..........T................. CATAACGGTTGGTTTATAGTCTCCAAAACGATAACCTGT 32550 28 100.0 37 ............................ ATCTCCGCCTACTCTTATTGATGAAATATATTTAAGT 32485 28 89.3 11 .................A...A.....C CTCCTAAACGT CCC,CGC [32456,32463] Deletion [32447] 32440 28 100.0 39 ............................ ACTTATTAATAAGCCGGTAAGAGAGTCCTCTATTCAGGG 32373 27 75.0 0 GTT....-............T..T...A | T [32362] ========== ====== ====== ====== ============================ ======================================= ================== 7 28 94.4 34 TAAAACATAACAATAGATGTATTGAAAT # Left flank : ACCCATCCTATACAAGTCAACGATGTAGTGAATGTGGGTATATCCATAAAAATAATCGGCAAAATCAATCTACCTTTGAATGTCAGCAATGTAGTTTTAAAGTTCATGCAGACTACAATGCTGCCAAAAACATTTCTGTGTACAATATTGAGAAGGTAATACAAAGACAATTGAAGTTACAAGAAAAATTAAATTTAACAAAATATAAAGAACAGTATATAGAGCAGATGGAAAATATTAATTAAATAAGGTAGTAGTTTGGCGGATTTCCACGCCATAAATGGAGAAGTGATACACGGTAAATTTACCAAGTGTCAACGCCCCGTAAGGTAGTATCGAATGTTAGAAAACATTGATACATAGGCATTCTGAATGCTTTGAAGGATGTAACACAAAGACCGTTACATAATACATTAATTTGCTGGTAAAAAAGCAGGATATTGTTGATATATAAGGGATTGTCGCAATATTTATTGTTAATCATCCATATATTATCGAGA # Right flank : GAATAACAAATCAATAAGAAAACCTGGGTGCAAGAGTGTGAATTATTAAATTTTTGGCGGATTTCCACGCCATAAATGGAGAAGTGGTACACGGTAAATTTACCAAGTGTCAACGCTCCATAAGGTAGTATCGAATGTTAAAAAAACATTGATACATAGGCATTCTGAATGTTTTGAAGGGTGTAACACAAAGACCGTTACACGATACATTAATTTGCTGGTAAAAAAGCTGGATATTGTTGATATACAAGAAATTGTCGCAAAATTCATTGTTAAACATCCATATATTATCGGGGTTAAAACATAACAATAGATGTATTGAAATGGGTTTATTCGTGTCTTTCTTCGCCCTGATCACAATAGTTTAAATATAACAATAGATGTATTGAAATGTCTTATAAGTCCTCGTAATACTTAACGATCTACTGGTTAAAACATAACAATAAATGTTTTGAAATTGGGGAAACGCTTGGCACATCGCAAAATCATGGCAAAGTTTA # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:0, 3:3, 4:0.72, 5:0, 6:0.25, 7:-0.33, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TAAAACATAACAATAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.14%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //