Array 1 117735-116183 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNAG01000006.1 Ruminococcus bromii strain BIOML-A3 scaffold6_size128154, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 117734 36 100.0 30 .................................... AAAGGCAAAGAGCAGTACGACCCGTCCGAG 117668 36 100.0 30 .................................... AATTCGGGTTTCGTTCCTCGAACCCCTTTA 117602 36 100.0 29 .................................... TCACCGAAGATTTCTTGATAGGCTTGCTT 117537 36 100.0 30 .................................... TCGGCAATGGGTCTTCCAACTTCTTCTGCC 117471 36 100.0 30 .................................... GGCTTTTCGCTCGGCTTCGACCTCAAGCCC 117405 36 100.0 30 .................................... TTGGAAACAAGCATAATATTTCAAGACAGG 117339 36 100.0 30 .................................... TGATTTGGTCTGCGCAGTTTAATGCGATTG 117273 36 100.0 30 .................................... TTTACTTGACTTAAAAAGTAAACTTAGTCA 117207 36 100.0 30 .................................... AGCGCAAGAGCAACGGTTACAATCGGTGTC 117141 36 100.0 30 .................................... GTATATGGACAAAAAAGATTTTGCTGACAA 117075 36 100.0 30 .................................... GTACTGCAAGTCTCTTGACCTTTTCTACTA 117009 36 100.0 30 .................................... TAAAAAATTTCTCAGCTATGCTATCCAGTT 116943 36 100.0 30 .................................... ATAAGTTGATAGTCTGTCATAGTCAGCGTG 116877 36 100.0 30 .................................... TATGTTTTTGTGCCGTCTTGCTCCGCCTTG 116811 36 100.0 30 .................................... GAAAGAAAAATCATAATTGTTTAACTTGTG 116745 36 100.0 30 .................................... ATCGTGGGTATAACATTATGTACACACTCA 116679 36 100.0 30 .................................... TTCTTCAACATCGTACTGATGAGGGTTTGC 116613 36 100.0 30 .................................... AGCCGTGTATAATAAAAAACTTGACAGCAC 116547 36 100.0 29 .................................... CTCTTTAAGAACAAGCACATCATTTTTTA 116482 36 100.0 30 .................................... GGTATTGACAAACATTACAAAATGTGGTAC 116416 36 100.0 30 .................................... ACAAGAAACTTGATGAAATGGCAAGCGACG 116350 36 100.0 30 .................................... TCTTTCGTGCGAGTTCCGCTTGTGACATAC 116284 36 100.0 30 .................................... AACTGATAAAGTTTTCACTATGTCAGATTC 116218 34 88.9 0 .......................T..--.......T | C,A [116186,116197] ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.5 30 GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Left flank : TTTTTTTGAAAATTTGTGTAATACAAAATATTTTCCGCAAATTTCAGAAATTAAAGCTTTATGTGTGAGCTTGTGCTGCGAGCTTTCTAAGGAAAATGATTATGATTTTCAGTTCTGCGAAAGTATCGAAACAATGGCATTAGTAAAATTGTTTTCATTTGCGCCTGCAGATGCCTCGGATGATAATGTCGGTCATCTTTTAAGATATTTCAAACTTATGAAAGAGTATCTTGGAATAAAGTGTTTTATTGTTCAAAATCTGCATATTTATCTTGATGACAGTGAATGTGAAAATCTTTTGGAATCCGCTGTTATGCACGGTATATATTTGCTTAACATTGAAAACTCAGTGCCGAAAGAAGTTTCTGAATACGAAAAACTTGTTGTGATTGATAATGATTTGTGCGAATTTTATTGACAATCATTATACAAATGTTATAAAATAACCTCATAGATTTGCCGTGCACAGTATAGTGGGTGCATTTTATTCCCAATTTGAG # Right flank : TTTACTCGTGGACTGTGAAAAAACAGCATTGCAAAAAACAATAAGGCACATAACCGTTATCACTTTCGGTTATGTGCCTTTTGTAGTTTAATAAGTTTGTTAAGAATACCACGATTGATTACAGTCCAAAACAAGGAAGATTTCAGTGCGTTAATTCCAAAGTAAGTTCCACCATTAAAGTTACTTTGGGGATTAACTATGTACTTTTTTGTTTAAGTTTGCGGTAAATATGAATTGTATAATCCGTTTTATTGTGTTATTATGTAGTAAAATGGTGTGCAACATTGGTGTTTTGAAAAAATTATGTTGCTGAAATTAAACTTGAAATAACTGACGGGTGGCATATGGTTCGCAAAGTTGACAAAACAAAGCTTCTGACTGTTGTCGGGATAATTATATTCCTGTTCGGAGGTGCGGTGAGAATTTTTTCTCATCTTACTTCCTCGGCGGATAATTATATTGAAAATTTTGATGTTATTATCTTTTCGGGGCTTATTATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //