Array 1 18778-17733 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADMXA010000004.1 Parabacteroides johnsonii strain 1001275B_160808_A11 NODE_4_length_243325_cov_48.9085, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
     18777	    47	  95.7	    28	.....A.....T...................................	AGTCTTTTGCGGCTTGAAGCAGCATCTC  	
     18702	    47	 100.0	    30	...............................................	CGATTGTTAAGTATAGCAGCAGTACGAGTA	
     18625	    47	 100.0	    30	...............................................	GAAATACGAATTGCCTTATCCGAAGTGTTA	
     18548	    47	 100.0	    30	...............................................	ACAACAGTACCAAAGTAAGCAACGGCGATA	
     18471	    47	 100.0	    30	...............................................	CTAGGGCCTGCAACATCAGCCGGAGGAACA	
     18394	    47	 100.0	    30	...............................................	ACGGTCTGGCTTTTGAACATATTCATACCA	
     18317	    47	 100.0	    30	...............................................	GGTACTAACTCTGTGAACACAGGGGTGATA	
     18240	    47	 100.0	    30	...............................................	TAAAATGTTTGAGGTTGAAAAATTGTCGTA	
     18163	    47	 100.0	    29	...............................................	TTGAGAACGGAGATGAGGAACCAGAATAC 	
     18087	    47	 100.0	    30	...............................................	TTATAAGTCAAAGTAATAAAGAGGGGTGCA	
     18010	    47	 100.0	    30	...............................................	AGAATAGCTTTTGCTTCAGCTTCGGATAAG	
     17933	    47	 100.0	    30	...............................................	GTTGAAAAATTGTTATAGAATCAACAGAAG	
     17856	    47	 100.0	    30	...............................................	TATAATGCTCGACTTGCGTCTTTTGGGCTC	
     17779	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
        14	    47	  99.7	    30	GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTAGAAACAAC	                              	       

# Left flank :   GAACTGAACGGTCGCCAAGCTGTACGCAAAGGACCGTGGAAATTGGTCCACATGAATATCCGTGGTGACAAGCCCTATTATGAATTGTATAACTTAGCTTCCGATCCATCGGAACGGCATAATATACTGGATCAGTATCCTGAAAAAGTAGCGGAACTGAAAAATATCATGGTTCGTGAACACAGATCGGACCCAAACTGGCCGCTATTACCGAGTGAAAAATAACCTTCCAAAAAGTTTGTTTCCAATAACAAAAATGACCTCTTCCTGCTTAACGAGTAGATTACTATTTACTCGATAAGTAGGTAAGAGACAACATATCAGATCTTAGTATATAGTAAAAAAAATCTTAAAGTATCTGATATTAGAATTAATGGTTGGGATCTTAGGAATCATAGTCCTTAAGTATATGTTGGTATAGAAAAAATTTCATAATATGGCTAATTATAAACATATTCATATTTGTAGAGTATTATATACTTTGCATCTACATCTCCAAA
# Right flank :  TGATTTATCATTATCAATTGTTAATCAACAAATTACACAGCAAATTAGAATAAAAAAATGGATGTTGTTTCAAAGATAAAATCCCACTATTAAGCGGGATTTTTCTTTTTAAAACAGTTCTAATTGCTGCCCTGGAGTACTCACCTCCATTGTCTTTTTACCATAAAACAGTTCGATATTTCCAAACTGCTTATCCGTAATACACATAATTCCGACACTTCCATACTCTGGAATAAACGATTTAACCTTTTTTATATGCACAGTTGCATTCTCGCTACTGGCACAATGACGGACATAGATAGAAAACTGAAACATTGTAAATCCATCCCTTTGCAGATTCTTTCTGAAATCAGCATATGCCTTTTTCTCCTTCTTCGTTTCAGTAGGCAAATCAAATAATACAAGTACCCACATAACACGATATTCGCTAAATCGGTTCATAACTACATTTCCGGATAAGAAATTTTGCGCAACTCTCCACTGAAGCACTTATACAAGGA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTAGAAACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:70.21%AT]
# 	Reference repeat match prediction:         R [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-1.50,-1.30] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [80.0-76.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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