Array 1 69886-71533 **** Predicted by CRISPRDetect 2.4 *** >NZ_NNRH01000003.1 Vibrio parahaemolyticus strain A1_1 A1_1_contig003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 69886 28 100.0 32 ............................ ACGCGGGTTTGACGGAACCACATGCGCTCAAT 69946 28 100.0 32 ............................ AAGATGAGCAAAGGTAGGCCAGTAGTAATCCA 70006 28 100.0 32 ............................ GTGCCTACCTCGTTGGATGTATGGCACTATGC 70066 28 100.0 32 ............................ TAATCGCGTTAGCGGTCTATTCAGAAGCTCCG 70126 28 100.0 32 ............................ CATACATACGCTTTTTCAGTATCATCCCACTT 70186 28 100.0 32 ............................ ATTACTGACACTGCTAATTCAGCCGCCAATGT 70246 28 100.0 32 ............................ TGATGACTCTACTGATTACTTGATTCCCGTTC 70306 28 100.0 32 ............................ CATACGAGCATCTTGAGCTTTTAACCACGCCG 70366 28 100.0 32 ............................ AGAATCATAAACCAAGCTTCCGCCCTCCGATT 70426 28 100.0 32 ............................ AGAATCATAAACCAAGCTTCCGCCCTCCGATT 70486 28 100.0 32 ............................ TTCACACGAGCCGCATGGCCAACTAACAAAAG 70546 28 100.0 32 ............................ CAAGTGAGCGAACGCAGGCCAATAAAAATCAT 70606 28 100.0 32 ............................ GCTCAACAGGCTATTGAAGAAGAGCGCCGCAC 70666 28 100.0 32 ............................ AAGCAATTATCATCGCGACTAAGATGATTTAG 70726 28 100.0 32 ............................ CAGGCAGACCGGCTTTAAAAACAGAATTAGGT 70786 28 100.0 32 ............................ GGACAAAGTCCGCCAACTAGCGCGCTAACGCT 70846 28 100.0 32 ............................ TGTCGACTTGTCGTTCGACTCCATCTGTTCGT 70906 28 100.0 32 ............................ AGTTATTGAAGAAATCGAAGATGATGAGGAAT 70966 28 100.0 32 ............................ GCTATGAGTTCGTTGGCTTATAATGGCGTCAC 71026 28 100.0 32 ............................ TGATTTCGTGGCTGATTTCCACTTCGAAAACT 71086 28 100.0 32 ............................ AAAAGGCCAAGGAAAACAACTACTCCAAATGA 71146 28 100.0 32 ............................ TTGGTGAGCAAGCCATACTAAATCGTGAGATT 71206 28 100.0 32 ............................ TTGCGTATAGCGAATTAGATCGCCGTGGCATG 71266 28 100.0 32 ............................ ACGCCACCGTCACCCACATCAATTGATGGATT 71326 28 100.0 32 ............................ ACACAGAAACAGAAAAAGCGGATATCAACCTA 71386 28 100.0 32 ............................ TTGTGCAGAAAATTTAAAGATACCGCAACACT 71446 28 100.0 32 ............................ GTCTTATGACTTTATCAACTGTTCCTGTTTTG 71506 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 28 28 100.0 32 GTTAACTGCCACACAGGCAGCTTAGAAA # Left flank : CGAACGATGTGACTTACGTTAGCTTTACTCGGAAACAAGTTAAATCACCTGAGAGAATTGAACGCGATATGCAGAAAAAAGCTGAGCTTTGGGCGACTGAATCTGGCAGGTCTCTACAAGAGTGTCTTGTGGAGCTGGAAAAGACTAAGCCGACCTCGCTCTGTTCATTACCGTTTATCTATTTACATAGTCAACAGACCAAACAACGTTCACCCGATAAGAGCAGTAGATTCCCGTTGTTTATTGAGATGAATGACATCGGAATTAAGCAAGAAGGGCAGTTTGATTGTTATGGACTGAATGCCAAACTTAATCAACAAGGCAGTCTGGGAACTGTCCCACAATTTTAACCAACAAAGGGTAAGTTTTTACCCTTTATTTTTGCTCTTTTAAAATAGGCTTAAAATACATAGAGTTACAATTGATGGTGTTTAACAAGGTAGAAACATGATTTTTATCTTAACTATCTGTTGTAACTTTCTTTTATTGATTTATTCTAT # Right flank : AGATCACAGTTTCATCAGCGAGTAGAAGAGCAGCAATTGGAGCTGGATTAAACAAAGGTCCCTTTTAAAGAGCTCACACAAATTCACCTTCTTTAGAAGGTGGTTATATACATAATACATGAGTCTGAATTTATGGTAAGTTTAACTCGCTTAGATCTGTTACAAATAGTAAAGTGTTAATTACTCGTAATGTTGACTCGTCTGGTTTCATAGCATAAGCGCGTTTGTATGATGTTGCGGCTAAGTAGGTTTTGCCCTCAACTTCAGCGATTTTGCCAGCGATGATGTTACTGAACCAAGACTCTCGTATGTTTACAGCTTTTGTTAATAGAGTTTTAGTGTTGTTCAAGTCATCTCTATCGAAGGAACAGACCGCAAGAGCTTCGTAATATATAGGAGCATGGAGCTCATCTCTTATACTCAACAAACTATCATACATCTCCTTTAGCTCGTTGTCTGGAATTGCGAACGGCTGGATTGAGTTAAGAATTTTAGCGGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCACACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCACACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //