Array 1 41347-41117 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VMLI01000016.1 Streptococcus sp. 9903 9903_S27_L001_R1_001_(paired)_contig_16, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                    	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===================================	==============================	==================
     41346	    35	 100.0	    30	...................................	AGAATGTTGGTTCTTTTTCACTGGATGTCC	
     41281	    35	 100.0	    30	...................................	TTACTAGTTGGGTTAAATTAAGCTGACGAT	
     41216	    35	 100.0	    30	...................................	ACTCTTGTAGTTGAGCATCTTTCAAGTCCG	
     41151	    35	  97.1	     0	...........................T.......	|                             	
==========	======	======	======	===================================	==============================	==================
         4	    35	  99.3	    30	GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC	                              	       

# Left flank :   TTCTTCAGGCACGAAATTAACGACATAAGCAGCGACTAAACTCGCCCCTACAAGTAAGCCTGTGCCTAGATATTGCCCCGCATAAATATGCCATTTTTGTTTATTCTGTGATAGCTGTGCAAATAAAATAAATAAAATAATTAAATAATCGATACTGGTGGAAATATAAACACCAATAGCAGATATGATTGTCTGTCCCATAAAAAACCTCCTGTATTGGTCAGTAATAAATCAGCAGATTTTAGGAGAGCACAGACACATTAATTTAGCTATCGCTAGTGGGTAATGTCGAACATAGGAAAGCATTTTACTCCTCCTCAAAACGTAGTTACAAAGTAATTTCTAACTGGAATTCGGTGACTACTTCCATGTAAAGTATAACATACTATACTTTACTTCGTAAAGTGTGGGCTCTCCGAAGGGGCTTGCAGACAGCTACTCGGCTTTTCAAGCCGAGTAGCTACGCACCTTTATGGTGTCATTAGCTGATACCATTTGAG
# Right flank :  CTCAATAAAAGAGCCCTCTGAAAATCAGAGAGCTGATTTGAGCTCGGGCTAAAATCCTAGTGAAAAAGATGAAACTCCTTGTGTTCATCGAACACTGTGTCATTTCCCTATTTTCATACGGATTTCTTACGCCCTTAGCATCATAATTCTTGCTGGATAAACCGTTTATAGACTAGACGACGAGGCGAAGAATGTACGAAACTTTCAGTGAAACAAAAAAATCTCCCCGAAGGGAGATCATTCTGGTTTATTTTACCTTACAGTGCTAGGAACCGTAACCGAAGATTATACTTGAGTATATCGAGGTAAGGTGACAAAAGTAAAAAAGCTACCCAATTTAGAGTAGCTTCATTATCAAGATATGCTCAATTGAACACGGCCTAAGCACCTGGCAAAAAAGATAAAATCTCCTAGAAACTGAAGTTTCTTCGTCAATTTTCCTATTTTTGCTTTGTGCTTTTGACGGCCTTTGTATCTTGAATTAACGACGAAGTCCTAGA

# Questionable array : NO	 Score: 2.82
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTAGTCTCCAAAATTGTGACCGATAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:65.71%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-3.20,-1.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,0.41   Confidence: LOW] 

# Array family : NA
//