Array 1 23-599 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCNU01000209.1 Streptomyces fradiae strain Olg4R contig00222, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 23 29 100.0 32 ............................. ACGGGTGCCCTGTCCCGCTCCTACATCGTGGA 84 29 100.0 32 ............................. CTCACCGTCTCCGACGCGACGGCCGAGACCAT 145 29 100.0 32 ............................. CTCCTCGCGGTGAGCGCGGCGGACTGTGTGGA 206 29 96.6 32 ............................A GTGAGGGGGTCGAGTTCTTGCCGGACGCGGCG 267 29 100.0 32 ............................. CATTGGGACACGATCGTTGCGAAGACGCGGGC 328 29 96.6 32 .......................A..... GACGGTTACTCGATCGCGCTGCAGATGCTCGC 389 28 96.6 32 ......-...................... AGCGAGACGTAGCTGCGGCCGGTCACTGCGGT 449 29 100.0 32 ............................. TTCGCGGACCGTCTCCGCGGCCTCCACGTCTA 510 29 96.6 32 ................T............ ATCGTCTCGCCTGATCACGTTCGCCGTGCCAT 571 29 89.7 0 ..........T...........C..T... | ========== ====== ====== ====== ============================= ================================ ================== 10 29 97.6 32 GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Left flank : CCGGTGGGCAGGTGGCGCGGCGG # Right flank : GGTGAACCGAGTGTCCAACGCTCGGGCATTGGACGGGTTCCGGTCGGCTGTGGTGTTCCTGTCGAAACAGGAACACCACAGCCACCGTGCCGTCAGTTGTCAGGATCTGCCTCCAAGCCAGCCAGCGCCACGTCGATGAGGTGGTTGGAGCTCTGCTGGGCGCCCCGTAGGACCTTGGCGTAGAAGCGGTAGAGGACGGCGAGGCTGTGCCCGGCGCGGCGGGCTACTTCGACCGGGTCCACTCCGGCCTTGAGCCACAGGGAGATGCCCGCGTGGCGGAGGGAGTAGGGGACGTCTGCGAGGGATGTTCTGGCCTCCTCGGGGCTCAATGCCTTCTCGCGGGCCTTCTCCCACAGTTCGCAGTATTCGGTGGAGCGGACCCGGCCGCCGCGGACCGCGCGGAAGAGGCGGCCGTCCGGGGCGGTGCCGTGGGTGGCCAGATGGGTGCGCAGCATGCCGACGAGAACGGGCGGGATCGGGACGGGGCGGGTCGCCTTGCG # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 476-20 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCNU01000257.1 Streptomyces fradiae strain Olg4R contig00271, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 475 29 100.0 32 ............................. TACTGGGCGCTGCAGGGGCGGGTGGAGCCGCT 414 29 100.0 32 ............................. GTCGGCGAGGCCGTCGGGGAGATCGCCCCCTG 353 29 100.0 32 ............................. CGAGAGGGGATGACGATCATCCGCGCCTTCGC 292 29 100.0 32 ............................. CGGCACGGCGGGATCGGTTGACCGGAGGCGTC 231 29 100.0 32 ............................. GCCGAGCCCCACCAGGACGATGCCACCGCCGA 170 29 96.6 32 ............................C CGTCCACGAACTGCGCCGAGTTGAACACCCGG 109 29 100.0 32 ............................. CAGATCGCACGAAAGCTGCGCAGCTACCTGAG 48 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 99.6 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CGCTCTCGGCACCCGGCGCTCGCAGATAGACCGGCTCGTCACGCACGGCCGCGAACGCCGCCGGCACCTGGGCCTGGAACGGCGGCGTGATCTTGCCCAGGTCATGCAGCCCGGCCCAGAACGACAGGACTACCCGCGCTTCTCTCACGGGCAAGCCCAAAGCATCAGCCAGGCGCTGTCGCATACGCTCGCCGAGTAAGCCGTCCCAGAGCGCGGAGAACACAGCGGCAGTGTCGAGCAGGTGACACACCACCGGGTACGGCCGCGATAAGCCCTTCTCCTTCCCCCACATACGGGGGTCCAGGAGAGGTGTCCCGTCGGCCGGGGGCTCACTGTTCATCATGCGCCAGGGGTACCAGTCGGCACTGACAACGCCCAGCACGCCCATACACTGATCTGTCATGACCTCACCTCACAGCGCCGATTTCGCTCGGGCCGCGCTGCGACTGCACAAGGGCAAAGTAATTGCAAAGGCGCTCTAGAAGGCCAGGTCAGGAAGT # Right flank : GGCGAGCCCCGACCAGGACG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [6.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 10213-10668 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCNU01000257.1 Streptomyces fradiae strain Olg4R contig00271, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10213 29 100.0 32 ............................. CTGCGTGGCGACCATGCCCGTACCGAGCCCGG 10274 29 100.0 32 ............................. CAGGCCAACTACGACGGCAACCGCGGGGACGA 10335 29 100.0 32 ............................. TTTAGGAATCGCCGTCCGCGAACGCGTCGAGC 10396 29 100.0 32 ............................. AGCAGACCGCCGAAGGCCTCGCCAACGTCTGG 10457 29 96.6 32 ............................A GAAGGGCAAACGGCTGCGCGCGGAGCCCATCG 10518 29 100.0 32 ............................. CGGGGCGGGTCAATATGTGTGCACAGATAGCG 10579 29 100.0 32 ............................. GCGGCGTACGTCGCGCTCGTGGCCTCGGCCGC 10640 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 8 29 99.6 32 GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Left flank : CCCGCGCATCGTCGCCGACATCCAGCAACTGCTCGACCCGGACACCGAGTACGAGGTCCCGGACCCGGAGGAACAACTGGTCGACCTGTGGGACCCGGTAGCCGGCGCGATCCCCGGCGGGGTCAACCACGGAGTGGAGTCGTGACCGCGCCCACGAAGGGACACGACCCATGTCCTCAATGATCGTCATCTCCGCCACGGCGATCCCCGACCACCTCCGCGGTGCCCTGAGCCGCTGGCTGCTGGAGGTAACACCGGAGCTGTACGTGGGCACGGTCTCGGCCCGTGTCCGCGACGAACTCTGGACCTCGGTCGCCGCCTGCGCCGGAGACGGCATGGCCGTCCTCGCTCACCCCGACGACAACGAGCAGGGCTTCACCCTCCGCACGGCCGGCACCCGCCGCCGGGAACCGATGGACTTCGACGGCTTGACCCTGATCGCCTTCCGCAGAGAGAGTCAAGAAATGGCAAACCGCTTCTGAAAGCGCAGGTCGGGAAGT # Right flank : | # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 10-222 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCNU01000258.1 Streptomyces fradiae strain Olg4R contig00272, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 10 29 100.0 32 ............................. AGCCGGGCCGAGGCCGCGCGGGCCAACCGGGC C [17] 72 29 100.0 32 ............................. GAGGCCATCAAATTCGGTGGCTATTCCTACAG 133 29 100.0 32 ............................. TCGAAGATTCCGCCGTACCGTACGGCGATCAT 194 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 100.0 32 GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Left flank : GTCCGTGGCG # Right flank : ACGCGGACCAAGGCCCGCGCCCGGAAGAAGA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,1.05 Confidence: MEDIUM] # Array family : I-E [Matched known repeat from this family], // Array 1 2-263 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCNU01000312.1 Streptomyces fradiae strain Olg4R contig00329, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2 29 100.0 30 ............................. TCGCCGTGCCGTGCCCGACCTGCCGACCGC 61 29 100.0 32 ............................. TCCTCCGGCAAGGACGCGCAGCGCAACCCGAC 122 29 100.0 32 ............................. CCAGCCGATCGCCTCATCCTGACCGGCGATCC 183 29 100.0 30 ............................. TAGGTGACGATCTGGGACACGCGCCGCGCT 242 22 75.9 0 ......................------- | ========== ====== ====== ====== ============================= ================================ ================== 5 29 95.2 31 GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Left flank : GG # Right flank : | # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGACCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 42965-42448 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCNU01000065.1 Streptomyces fradiae strain Olg4R contig00071, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 42964 29 100.0 32 ............................. GTGGCGCAGACCGTGCTCGGGCACGAGCGGGG 42903 29 100.0 32 ............................. GAACAACTCCTCCTCAAGTTCGTCCAACGCCT 42842 29 96.6 32 ...........................T. GCCTGGTCAGAGAGGTGGTGGGGTCGTTGAAG 42781 29 100.0 32 ............................. GCGTATCAGCGCGCATCCGGGCAGTGGGTCAA 42720 29 100.0 32 ............................. CCCCGCCCTGCCCGGAGGGGAATCCGGGAGGA 42659 29 100.0 32 ............................. CTCGGACCGGCGGACGGCCTGACGGGCCCGCT 42598 29 100.0 32 ............................. TGGACGCGGTACGAACTCAAGAACGTTGCTGA 42537 29 100.0 32 ............................. TGCTCGGTGCTGCGCACATCGCAGTTCCCGAA 42476 29 89.7 0 .............A...........A..A | ========== ====== ====== ====== ============================= ================================ ================== 9 29 98.5 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GGCCACGGGCCTGGGCATCCGGGCCTGCCAGGCCGGTCACCGAGTCGCGTTCGCAACCGCCGCCGAGTGGGTCACCCGCCTGGCGAAGGCCCACGAGACCGGCCGCCTGGACGAGGAACTGGTCCGGCTCGGCCGGATCCCGCTCATCATCGTCGACGAGGTCGGCTACATCCCCTTCGAGCCCGAGGCCGCGAACCTGTTCTTTCAGTTCATCTCGGGCCGCTACGAGCGGGCCTCGGTGATCGTGACCAGCAATAAGCCCTTCGGCCGCTGGGGCGAGGTCTTCGGCGACGATACCGTCGCCGCCGCCATGATCGACCGCCTCGTCCACCACGCCGAAGTCATCTCCCTCAAGGGAGACAGCTACCGCATGCGCGGCCGCGACCTCGGACGGGTTCCCGCCGCCAACACCAGGGAATGACCAACATCAACTGACTACGGGTCCACTTTTCATCCGCTGCCTCCGGTCCACGATTGCGCCGTTACCGACACTCGGACAG # Right flank : CTGCGGAATGGCAAGCAGTCGTTCTGGGCCTTCCAGATGCTCCAGAAGTTCACAGCTGGACCGAACCCCGTCCGCAGTCGGTCCGTGGATGGTCCGTGGACGGTGATCAACCGGGGAACAGAGTGAGACAGGGTGAGACAGCGAGCCGCAGGACGCGGCTCGCAAATCGGCCCGGAACCCCGTTCCACCTGCGGTTTGTGTGAGCTGAGGAAACTGCTCGATTCGTGCGGTCGGGGGCCATTTCAGGACACTTCGGCTTTCAAGACCGTTCCCTTAGGCCGCTCGGGCAACCCTCCCTCGCCCCCGCCCACCTGCGGCGGAAGCGCCTACAGCCTACCTGGCGGGCCCAGCCGTAGGGCTCTTGGTCCGTCCCTCGGCCGTGACCTCGGAGACCGTGCTTCCGGCCGCTCGGCGCCGCGGGCAGGCGTCCCCATGCTAAGCGGCACGATCGCTTCTCTGTGGGGCAGTTGAGGAAGCGGCACGTCTTGCTCAGGTGGACG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 45968-45206 **** Predicted by CRISPRDetect 2.4 *** >NZ_MCNU01000065.1 Streptomyces fradiae strain Olg4R contig00071, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 45967 29 96.6 32 C............................ CGGGTGCCGTCGCAGCGTGAGGCGGGTGCGGC 45906 29 100.0 32 ............................. CGGATACGCCTCCTGGCTCAACGGCACGATCC 45845 29 100.0 32 ............................. CACGACGCCGCCTGACCGCCAGAGAGGACACC 45784 29 100.0 32 ............................. GCTGGCCCGCCAAGACCAGCCGCGACACCGAC 45723 29 100.0 32 ............................. TTGTACATGGTGGTGAGCTTGTGGGTTCCGCT 45662 29 100.0 32 ............................. TCACGTACGGGGACCTCGGTACGTGACCCGGT 45601 29 100.0 32 ............................. TTGTTGTCCCAGGGTGTGTAGTCGTAGCCCTG 45540 29 100.0 32 ............................. CCGTGGAAATGGACCCGGATACGGACGAGGTC 45479 29 100.0 32 ............................. TTGGCCGCCCCGGGCGTATCGGGGCGGCCACC 45418 29 100.0 32 ............................. CCGGCGTTCTCTTACCGTGACTGGCGAGGAAA 45357 29 100.0 32 ............................. ATCACCCGCCACGGCGGGCCGACCATCGCCGG 45296 29 100.0 32 ............................. GCCGCCGCCAAGGCGCTCGACGACGCCGCCGC 45235 29 100.0 0 ............................. | A [45229] ========== ====== ====== ====== ============================= ================================ ================== 13 29 99.7 32 GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : TCGGTGT # Right flank : GTCGAGCGGGGCACCTCGCACGGCTCGGATGTCGACAACGCCTCAAATTGTGCCGCCTCCAACGGATGAAAAGTGGCCCGTCTGAACGGTCTGGCTCGTTGAGTCAGGCAGGGAGGAAGGGTGATCAGCGTGGAGGACTGGGCGGAGATCCGCCGGTTGCATCGGTCTGAGGGCATGCCGATCAGGGCGATCGCTCGGAAGCTCGGGATCTCGCGGACGACCGTGCGGCGGGCGGTGGCCAGCGACCGGCCGCCGAAGTATGAGCGGGCCCCGAAAGGGTCGATCGTGGATGAGGTCGAGCCGAGGATCAGGGAACTGCTGGAGGTCTGGCCGGACATGCCGGCGACGGTGGTGGCGGAGCGGATCGGCTGGCAGCGGGGGATGACGGTGCTGCGGGACCGGCTGCGGGACCTGCGCCGGGATTACGTTCCGGCGGACCCTGCGTCCAGGACGGCCTATGAGCCGGGTGAGCTGGTGCAGTGTGATCTGTGGTTCCCGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [33.3-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //