Array 1 480900-478856 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK106988.1 Streptomyces sp. Tu 6176 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 480899 29 100.0 32 ............................. CTCACCTGAGATGGCGTCCGCCGGCGGCCAGC 480838 29 96.6 32 ............................A TCGGAGGCGGCGATCGCGCGGGCGGCGCTGGC 480777 29 100.0 32 ............................. TGGGACCAATAGCGGGGGCCTTGCCATCCGCA 480716 29 100.0 32 ............................. GCCGAGCGGAAGAAGTCCCGCGCCGAGCTGTT 480655 29 100.0 32 ............................. TGGGACCAATAGCGGGGGCCTTGCCATCCGCA 480594 29 100.0 32 ............................. TTCGCCTCGTATGTCTGGTTCGCCTTGACGGT 480533 29 100.0 32 ............................. TTGTGGGATTGCCTACTACGACTCGCCTACCC 480472 29 100.0 32 ............................. ATCCCCTCCAGGAGAGTGGTCTTGGCGCTGCC 480411 29 100.0 32 ............................. TTCCTGCGGGACTTGCTCGAAAACGCCGAGCA 480350 29 100.0 32 ............................. CGGCCATGCGGATCGCTCCCCGGAAGGGCTGG 480289 29 100.0 32 ............................. GATGTTCTCCAGCGCTTCCGCCGGGTCGACCG 480228 29 100.0 32 ............................. GTGGCGGTTGGGGTCGATCCACTCGGCCGGGC 480167 29 100.0 32 ............................. CATGGTGGGGTGTTCTCCTCGTGGCGGGTCGA 480106 29 96.6 33 .......................A..... GTGAAGGCTCCGCACTCCTACGACCCGGCCAGC 480044 29 96.6 32 .......................A..... TTGATGTTCGGGTTCGAGCTGCCGTCCTTGTT 479983 29 93.1 33 .......................A....C AGCCGCCCGGCCTCGGAGTCGACATGGAATCCC 479921 29 96.6 32 .......................A..... GAGTACACCGTCGAATCCGTGGGCATCGGCGG 479860 29 100.0 32 ............................. CACCAGGTCGTCGTGCGGTTCGACCGCAACGG 479799 29 100.0 32 ............................. TCACTGCCCCGGTGCGGCTTGGCGACGTCCCG 479738 29 100.0 32 ............................. GCGCAGTCCGTCGCGCTCCGGACGTTGCTCCT 479677 29 100.0 32 ............................. GAATCCAGACTGACTGGAGGAGGCCATAGAGA 479616 29 100.0 32 ............................. CGCCGGCTCGTCGGCGGCGCGTTCGTGGGCAG 479555 29 100.0 32 ............................. GACTGGGCGATCTCCAGCATGTCCGCGGCGGA 479494 29 100.0 32 ............................. CGGCCTGTGGCGCGTGGACTTGGGTCAGCCGG 479433 29 100.0 32 ............................. GACGAGAAGTCCGACGCCTACGCCTACCTCCG 479372 29 100.0 32 ............................. ACGTGCCAGCCGCTGTTGTTCTCGGCCTCGGC 479311 29 93.1 32 ...G.................A....... GACGCCGAGGAGGACATCGACGCCCTCGACAA 479250 29 96.6 32 ...G......................... GTGTCCGCACTGCTCGTCTTCGCCGCTCTCGG 479189 29 96.6 32 ...G......................... GCCACGTTCGCGTTGCTGTTCGGGGTGGCGTT 479128 29 96.6 32 ...G......................... TCGTGGATGACGTAGTCCCCGGCGGCGGGCTG 479067 29 96.6 32 ...G......................... TCGTGGATGACGTAGTCCCCGGCGGCGGGCTG 479006 29 96.6 32 ...G......................... GTGATGGGCAGCTGTTCCGAGACACACAAGGG 478945 29 96.6 32 ...G......................... TTGTCCACAGGGGCGGCGGCCCACTTACGGTC 478884 29 89.7 0 ...G....T.........C.......... | ========== ====== ====== ====== ============================= ================================= ================== 34 29 98.3 32 GTGCTCTCCGCGCGAGCGGAGGTGGTCCG # Left flank : ACGACGACGGAGACGAGGCGGTGGCGGATCCCTTCTGAATCCGACACCGGCGGCCACCCACCGCGTCGCGCCGCGCGGGATTCCTGTCGCCGACGGTGTTGTACCGCGCTCTTCCGAGCCATTGCGGCGGCAGGATCGAACCCAACCCATGCCCCTTGCCCTGCCCGCCTCATGCCGCACCACGACACCGAGAACACCCTCGCGATCCGGCGATTCTCCGCCCCTCGCACATCACGAGGCACAAACTCACCCGGTTCGTGCACCTCACCTCACAACAAGCCCACCCGGCAGCGCAACGGGATGAACTGTCCGGCACTCAGTCACGCGGTGCGATCGGTCAGCTTGCTCCTGCATTGACGAGGACAAGCTGACCAGCCACTCCTGTCCCCTGAAAGCCGGCGCCGACTACAGTGCATGCCATGCCTGCCACTCACTTGCCACCGAGCACCACCCCCGGCAAGGAAACAGCAAAGCCCTTCTGATACTGCAGGTCAGGAAGG # Right flank : GGGGCCTGGCCCATGGGCGAGACCCGCCTCCCCGCCGCCGACACCGTCGTGCAGACCGCCGCCACCTACGGCCGCGACCTCGCCGAGTGCACCGTAGCCACGTACGTCGGCGCGGCCTGCGCGGCCGGACTCGCCGCCGTGTTCTCCCTGCTGAAGGGCATCGCCGTGCGGGCCGTCGGCCAGAAGAACTCGGCCAGCTCCGCCCCGGGCGTCTGATGTGGGGCGCGACGGCGCGGCGCCCGGTATCCCGCCGACCCGCCTTCCTCATCGCAGTCGGCTGCGGCTGGGCCGCATAGGGCGGCCTCGGCATTGTCGGCAACCCGGGCTACAGCAGCGCGCGGCCTCATCGCGATCACCACGTACGTACCGCTGATGTGGGGCGTGCTCGGCCTGTCCGCCGCGCTGGCCGGCCTTGTTGTCGGCTGCCCGCGCTTCCAGGCGGCTGGGTTCACCGCGCTCGCGGTGCCAGCGGCCCTGTGGGCGGCGGCGGTCGCGTGGGC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 494646-493213 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK106988.1 Streptomyces sp. Tu 6176 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 494645 29 96.6 32 ............................C CGTCGAGCCGCGGGCCTCTACCCCGGTCCCGC 494584 29 100.0 32 ............................. GCGCAGGTCGAAAAGCAGCCTTCCGACCCCGG 494523 29 100.0 32 ............................. TGCTGTGGGGCGGGTAGATGGACGGGTGGTGC 494462 29 100.0 32 ............................. ACGTCGCCGGGCCGGATCCAGCAGATCGGCTA 494401 29 100.0 32 ............................. TCCTCGTTGTACTGGATCGGGACGAGGGTGAG 494340 29 100.0 32 ............................. GCCAGGCCGCCCAGGAAGAACGCGCCGATGCC 494279 29 100.0 32 ............................. GTCGCCGTCGTCCTGCCCACCGGCCTGACGAT 494218 29 100.0 32 ............................. GCCAGGCCGCCCAGGAAGAACGCGCCGATGCC 494157 29 100.0 32 ............................. CGGGGGACGCGCAGCATCATCAGTGCGACGGC 494096 29 100.0 32 ............................. ACGTTCACGATCGGGGCCGAGTGATGGCCGGG 494035 29 100.0 32 ............................. ACGCCGTCGTACTGGCTGACCTGCTGGAGTCG 493974 29 100.0 32 ............................. TGAACGTCCGCGAGCTGGCGACAGTCGCGATG 493913 29 100.0 32 ............................. GCGTCCCTGCTGGGGAAAGCGCTCTTCTCGAT 493852 29 100.0 32 ............................. CTGACGCCGTCGACCCCGACCTCCGGCCGGGA 493791 29 100.0 32 ............................. ATGCGCGACCAGATGGCCCGCGCCACCCAGTT 493730 29 100.0 32 ............................. CCGAACACCCCCGTAGGGCTGGCTGTGAGGAT 493669 29 100.0 32 ............................. CGGCCAGGGGTGTCGGGTTGTGCTGTCACCCC 493608 29 93.1 32 ..................A.........C CGGTGACACGGCATTCCCGGACACCCCGTCCC 493547 29 100.0 32 ............................. GCGCGGGGATCGATATTCCCAGAGTCGCTTCC 493486 29 100.0 32 ............................. ACGCACTTCACGTGGCAGCAGATCTGGGACTA 493425 29 100.0 32 ............................. GTGACCGCCGAGGGCATCCGCCGGACCCTGCG 493364 29 100.0 32 ............................. GAGCAGACTCCGGGTTTTGATGCAGGCGACGG 493303 29 100.0 33 ............................. CCGCTCGCCCGCTACGACCTCCAGGTCACCGCC 493241 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 24 29 99.6 32 GTGGTCTCCGCGCGAGCGGAGGTGGTCCG # Left flank : GAGCGACGTGGTCTCCGCGCGAGCGGAGGTGGTCCGTTTTCCCGAAAATACCAGCCGAGCGGGGCGTCGTGGTCTCCGCGCGAGCGGAGGTGGTCCGCCCCCGAGCCCTACAGCGCCCTGGACGAGGAGGTGGTCTCCGCGCGAGCGGAGGTGGTCCGCGGGCGACGTCGATGGCGCCGGCGCCCGCCACGTGGTCTCCGCGCGAGCGGAGGTGGTCCGTGATCTCACTTATCGGAGGTTTGGGGCGGACCGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGATCTCACTTATCGGAGGTTTGGGGCGGACC # Right flank : GCGTCGTCGCTGCGGGCTACGGCCGGGCAGATCATCACCCCGACCGGTGACAGCCACGGTCTCGTCCTGCTGCTGGCGGTGATGCCGCTGCACTATTGGGAGTGGGTTTGGATCGGCGCGGGCATCGTCTCCCCGGCCTGCGTCTGGCTGCCGCCCCGCCGGGACTGGCCCGGCCCCGCCGCCATGTGGTCGATCTCGTCGGCGTGGGCGTTGGCCAACCCTGACCGTGGCGGGGTGAGCATGTCCAGCGGCACCAGTCCCAGTCCGGCCCGGCCACCCTTCGAGGAGCAGCCAGGCGTCCTCGTACACCCGGCCGCCGACCGGCGTCTGGCCACGGAGCACTGGCTCCTGTCCACCCGCCCCGATGCCCGACAGGCCCGTCTGGAACGGGCCGAGTACCGCGGCGCCGACTTCCCCCTCACGCCGAGGCCCTGGACGGTGGCCCGGTCATCTGCGACCCACGCTGGAGCGCGTACTGCACCCTCGTCCCAGCCGACGTG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCTCCGCGCGAGCGGAGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCTCCGCGCGAGCGGAGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-23.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 495322-494927 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK106988.1 Streptomyces sp. Tu 6176 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 495321 29 100.0 32 ............................. TGATGTCGAAGTGGACACCACCTGGACCGTGT 495260 29 100.0 32 ............................. GCCGCCGCGTTCCTCGCCGGGGCCGCCGTCCT 495199 29 100.0 32 ............................. GCAAGCCCGCGCGCCGTACGCGCAGGAGCGAC 495138 29 100.0 32 ............................. TTTTCCCGAAAATACCAGCCGAGCGGGGCGTC 495077 29 100.0 32 ............................. CCCCCGAGCCCTACAGCGCCCTGGACGAGGAG 495016 29 100.0 32 ............................. CGGGCGACGTCGATGGCGCCGGCGCCCGCCAC 494955 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 7 29 100.0 32 GTGGTCTCCGCGCGAGCGGAGGTGGTCCG # Left flank : GGCCATGACGTGGCACCAGTGACACGCCGAATACCCGACGCTGAGCAACACAGGCACACCCCGCCGCCGCGCCTCCTCGAACGCCTCCGGCTCCCAGGGCCACCAGTCGACCGGATTGTCAGCGTGCTGAAGCAGATAGGGCGAGGTCACACCAGCCAGCCGGTTCATGCGGCCAGCCTCTCACGCCGCCCGGCCGTGACGACTGAGCCCGCGATCCCATCCTTGCGCCCGACGGGCTTCCGCTCCCGTACCGCGCCGGTCGCCCTGCTGGAACCTGCAACGAGTCAATCGCCCTGCTCAGCGCTCAGCCAAGCAGAACGACCGGTCAGCGTGCACTGACGGGCCACGCTGCCGAGCCACTCCTATGTTCTGAAAGCAAGCGCCTGCTCTGAAAGCAAGCGCCGTCTACAGTGCATGCCATGCCTGCCATCCACCTGCCACCGAGCAGCACTCCCGGCAAAGAACCAGCAAAGCCCCTCTGACACTGCACGTCAGAAAGG # Right flank : TGATCTCACTTATCGGAGGTTTGGGGCGGACCGTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTGATCTCACTTATCGGAGGTTTGGGGCGGACCGTGGTCTCCGCGCGAGCGGAGGTGGTCCCCGTCGAGCCGCGGGCCTCTACCCCGGTCCCGCGTGGTCTCCGCGCGAGCGGAGGTGGTCCGGCGCAGGTCGAAAAGCAGCCTTCCGACCCCGGGTGGTCTCCGCGCGAGCGGAGGTGGTCCGTGCTGTGGGGCGGGTAGATGGACGGGTGGTGCGTGGTCTCCGCGCGAGCGGAGGTGGTCCGACGTCGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCTCCGCGCGAGCGGAGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCTCCGCGCGAGCGGAGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [25.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 1695612-1695217 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK106988.1 Streptomyces sp. Tu 6176 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1695611 29 100.0 32 ............................. TTAGCACCCTCCTAAGTTTGAAAGCAAGGGGG 1695550 29 100.0 32 ............................. AGACCGTTGGCGAGCACGTCGGCGGCACCGTC 1695489 29 100.0 32 ............................. AACCGGGCGAGCCCGAGGAACTTGCACAGGTA 1695428 29 100.0 32 ............................. GCCACGGAGCGTCGGGTCACCGCCGCTCACGC 1695367 29 96.6 32 .........................C... CAGAAGTCGGGGTCCTGGCGGCACGGCTCGTC 1695306 29 100.0 32 ............................. AGGCCGTTACGGAACTTCGAAGGCTTCAGGCC 1695245 29 96.6 0 ......................C...... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 99.0 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : AACGCCGGCGTGGCCTTACCGATGTCATGCACACCGGCAAGCCACACAGCGAGGGCACGTGCGTCCGCATCACCCTGCGGCAACGCCCCGGCCACCAGCCTGCGCACCCCTACCGGCAGCCACCGGTCCCACAACAGGCCCGCCACCGCAGCGGCATCCTCCATGTGCCGCCACAACGGCAACCACCCATCGGTATCGCGGTCATACTTGGCCCACACCGACCGGGCGGACCCCCGATCCGACCCAACAGGCCGACACAAGCGCTCCCCTCACCACTCATGAGCGATTGATACAGGCACCGACCACCACCTCACACGAAAACAAGCCAATCGAAGCAACTACGGGCAAACGGCCACCCCCGTCACATACGATCGTCGGCTTCCCCCTGATCCACCGAGAACCGTCTACGAGACCACTTACCACAAATGCCCCATTGGCCGGAATCTGCGAAAGTTACTGAGATCGTGTCCCTGCGGCAATAGACTCGCAGGTCAGCAAGT # Right flank : AGGCAACTCCTACCGCCGGCCCGGCGGGGACGCTGCTGTCCTGTCTCAGCGCAGTTAGTCGGCGGCGTCGCGTTGACCTGCGAGGGCTGGATTGGGTGAGACGGCTACCCAGCCCCGAACGTCTGAAGGCGAACCACATCCCCTTCAGCGACGCCCCCGGCGACCAGACGCCGCAGGTCACGCCCTGACTGGTCTCTTCCGCAACATCTGATCAGCACGACTCAGCAGGTCTGCGCTCAGCGTCGCCTGCCCTCGGCGCCCCATCGATGCTCGCCCCCTCGACAGGGTCTGACCTGCCCGACAAGGTGCCTGACATGCCATCAGGACGAGCGTCAAATGAGCGTCACGGTATCACCCGTAACGCCCATAGCGCACATCATGCGCATCGACCAAAGCCGCAGGTCAGCGGCCCTTTTCGACAGGTTCAAGGATCGCGACGCACTCCACGTGATGCGTCATCGGAAAGATGTCGGCCTGGACGAGTCACGAAAAGGACCAGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 1705566-1706325 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK106988.1 Streptomyces sp. Tu 6176 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1705566 29 100.0 32 ............................. TCGAATGCGACGGCCGGGAGCCATCCGAACAC 1705627 29 100.0 32 ............................. GAGATGACTTAGTACCCACTTGTCCAACATGT 1705688 29 100.0 32 ............................. CGCGGGAACCGCGGCGACGGCTGGGGCCCGGT 1705749 29 100.0 32 ............................. CGCGGGAACCGCGGCGACGGCTGGGGCCCGGT 1705810 29 96.6 32 ............................T CCGACCCCGGCACCGCGCGGGCACGGGCATCC 1705871 29 100.0 32 ............................. GCGGAGGAGGCACCATCACGGGTGTCCCGGCT 1705932 29 100.0 31 ............................. CCCACCACCGTCAAGGTGAACGGGGCGGAAA 1705992 29 100.0 32 ............................. AGCGCCTGGACCTCACGCTCCATCCCCGGCAT 1706053 29 100.0 32 ............................. CCCGCCCTCGCGCAACGCTTCCTCGCCGAGAT 1706114 29 100.0 32 ............................. GCGGTGAACACCAATGCGGACTGGACACAGCG 1706175 29 100.0 32 ............................. CACACCGACATCGTCGTCCGGGTCCTCTCCGG 1706236 29 100.0 32 ............................. TCGAACCGGGCCAGCAGCCGGGAGTCGAACAG 1706297 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 13 29 99.5 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CTCTGGCGTCAATTACGACGGGCCCGACTACGGGGACGAGCTCTGGTGACCGTCATCGTCCTCACCAACTGCCCGGCCGGACTACGCGGCTTCCTCACGCGCTGGATGCTGGAGATCTCCGCCGGCGTGTTCGTAGGCAATCCCTCAGCCCGCATCCGCGATGTGCTCTGGGGCGAAATCCAGCAGTACGCGGGGCAGGGCCGCGCTCTGCTGGCCCACACCACGAACAACGAGCAGGGCTTCACCTTCCGCACCCACGACCACACCTGGCATCCGGCCGACCACGAGGGCGTCACCCTGATCCGCCGCCCCGACCCGAACGCACCCCCCGCCGGTACGGATCTCCGAAACGGACCACCTTCCAACTGGAGTCGGGCCGGCAAACGACGACGCTTCGGGAGAGGGTGATGCGCATCGCAAGGCTTTTATCCTGTATACCGGAGTCGGGGAAAGTACTCCGAAACGGCTCCCGGTCCCAGTAGAACCGCAGGTCATTCAGC # Right flank : GCCAGGTGATCGTCATATAGGGCCCTCAACGTGGTGTCTGTGGGCGTGGCGACGATGTGGTGCGGTCCTGGTTCCTGCTTGGTATCGGTCCATGCATTCGGCGATGCGCGTCGGCGCGGGAGCAGGTCGGCCGGGTTGGTCCACTCGGTGAGATCCCCGTGACTGCGTGCCACGCCATGTAGTCGTACACGCGTCCCACGTACCCGGGGAGCTCGGACAGGCCCAGTGGGACGGCCTCGGCATTCTCGACGACGAGACCACTGTAGATGCTGCCGAAAAGGTCGACTTGCCGCAGCAGTGGCGGTACGGCAGGGCGTTGTTGGCGTGAGTTGTGTTCCGAGGGCGAAGGGCTAACGCTTTTACGGACTGAAGTCCCCCGGATAGAGCGGGCGTGAGGAGTAGGTGAATCGTCCTTGCTCTCTGCGGACCACGGGATCAGCGGGCGGGGGCTGATGCCGACGTCCTGCCCGGAGCGGTGGAGGCGGCGCGGGGGTGCTGGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 1710579-1708783 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK106988.1 Streptomyces sp. Tu 6176 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1710578 29 100.0 32 ............................. GGCCATGGGCTCACGGACGGGCAGGTTGATGA 1710517 29 100.0 32 ............................. CGGATCCGGGTGGACGACTCGGACGGGGACGG 1710456 29 100.0 32 ............................. GGACAGCTCGGGCGACCAGGGCCCGGGACTGG 1710395 29 100.0 32 ............................. GGCAGGGTCCACCCGGACGAAGACGGTGGTGA 1710334 29 100.0 32 ............................. GAGGCCCGCAAGGCGTTCAAGGGCGTCACGAA 1710273 29 100.0 32 ............................. GGGGCCCTGTACACCGAGCCGTGCCCCTGCGA 1710212 29 100.0 32 ............................. GAGGTGGTGTCGCGGTGGAGCCAGTAGTCGGT 1710151 29 100.0 32 ............................. TTCTGGGCCCGGCCGCCGGTGACGTACTCGAA 1710090 29 100.0 32 ............................. CAGCAATACCAACTCGACCGCGCGCTACGCGA 1710029 29 100.0 32 ............................. GCCCACCGCGCCCCCGTTCCCCGGCCGCGCGA 1709968 29 96.6 32 ............................T CACCACTTCCGTATTCGTCTACGGCGGCCCGG 1709907 29 100.0 32 ............................. AGCGCGTTCCCGGTGCCCGAATGGCTCCCGTT 1709846 29 100.0 32 ............................. CAGGACACGTACACAGCCCTGCGCGCACACCT 1709785 29 96.6 32 ............................T GCTGCCGGGCCTGATCGGGTTCCCCATCCCGG 1709724 29 100.0 32 ............................. TGGGCGGCCGAGCACATCGACAACCGCGGCTG 1709663 29 100.0 32 ............................. CGACCTGCTCGGTTCCCAGGTTGACTATCTTG 1709602 29 100.0 32 ............................. TGATCGGCGGCGCCGTTGCCGACCCGGACGGG 1709541 29 100.0 32 ............................. ATAGCATGTTTTTCATCCCCGGGGAATGGGAG 1709480 29 100.0 32 ............................. GCGTCCCCGGTCACGATGGCGGACGCCACCGT 1709419 29 100.0 32 ............................. CCGGTCTTGGTGATGGCGGAGGCCGCGGGCGT 1709358 29 100.0 32 ............................. TCGGCGAGACGCAGCAAGTCTCCAGCGGCGCG 1709297 29 96.6 32 ...........A................. GTCGTGGTCACTGGGCATGGGTCCTCCGGTCG 1709236 29 96.6 32 ...........A................. TGGTCGTCGCGAGCTGGAACGTGCCCCACAAC 1709175 28 93.1 32 ........-..A................. GCGGGCAGGTCGAGGCCAGCCAGGACGCCGTC 1709115 29 100.0 32 ............................. AAACGCCCGGCATGGCCGGGTACGACGGCATG 1709054 29 100.0 32 ............................. TGGCCGGCGGCGCCGTTGCCGACCCGGACGGG 1708993 29 96.6 32 .................A........... GGTTTGAGCAGCGTCATCGCCTCGTGAAGGGC 1708932 29 96.6 32 .................A........... TTCCCACAGACCTACAGCCAAGAGGGCCTGGT 1708871 29 100.0 32 ............................. AGGGGCGTACCCGGCTGCTCCAGGACGAGCGG 1708810 27 89.7 0 ....-.................C.-.... | T [1708785] ========== ====== ====== ====== ============================= ================================ ================== 30 29 98.7 32 GTGGTCCCCGCGCATGCGGGGTTGGTCCC # Left flank : CGACAGCGGACGCAACTACGGGGACGAGCCGATCTGGTGACCGTCATCATCCTCACCAACTGTCCGGCGGGACTCCGCGGATTCCTCACCCGCTGGCTCCTGGAGATCTCCCCCGGCGTCTTCCTGGGCTCGCCGTCCGCCCGCGTCCGCGACATCCTTTGGGACGAAGTCCGCACCCACTCCGGCCAAGGCCGCGCCCTGCTCGCCCACCAGACCGACAACGAACAGGGCTTCACCTTCCGCACCCACGACCACACCTGGCACCCCACCGACCACGAGGGCCTCACCCTCCTCCACCGCCCCTCACCCCCGACTACACCCCGCCCCGCTGCCGAGCCGCCACGGCAGGGGTGGAGCAAGGCGGCAAAACGACGAAGGTTCGGAAGATGAGCCTCAGTGAGAACACTCCGCCCGCTATGCCCACCAAATCCCCTTCGCCCGTCTCGCGCAAAGTGGGCAAAAACCAGCAGCCCCAGCAGTAAAGACACAGGTCGGGGCCT # Right flank : GACGTCCGCAAAGCATGGCGCGAAAGGGTGCGTCCGCAATCAGAGGTCCAACTTGGTCGCTTGGCTCTGCCCGCCGACGGCCCGATACAGGTGTGCCCCCGGTCCGGACCGGGGGCACACCTGCCGCCTACTGAGCGGCGAAGCCGACGAACGTCGTCCATGCCTCGACGTCGACCGCGAGGCCACTGCGGGCCACGTCCTTGGAGTCGCGTACGTGGACGGCGTGAGGGCCGACGGCGACCTCGATGCATTCGCCGCCCGCCCCACTGCTGTAGCTGCTCTTGAACCACGTGAGACCAGGGCCGGACTGGTCAGGCTTCATCGTCATCTCTCTCCCAGCAGCTTCTCAACGAACGCGAGCGATTCCCGGGGAGTGAGTCCTTGAGCGCGGAGAATCCCGTACTGCTCCTCGAACTCGCGCACCGAGCTGCGCTCCGTGTAGAGACGGCTCTCCTTGTGCGCCTCCACGTACGCGATCCTGCGCCCTTCTTTCGTCTCGA # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGTTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCATGCGGGGTTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //