Array 1 556895-557400 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NFIJ01000001.1 Parabacteroides johnsonii strain An42 An42_contig_1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                                	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	===============================================	==============================	==================
    556895	    47	  93.6	    30	.....A.....T..........................G........	AACAAAAGGATCAACATCTTTTCTAAGAAT	
    556972	    47	 100.0	    29	...............................................	TACAAAAGATAGAATATTGGCAGAACTAT 	
    557048	    47	 100.0	    30	...............................................	TTTCGAAAATGATTACATCAGATTTAACAA	
    557125	    47	 100.0	    30	...............................................	CTTTCGCTGGTTGGTATGAGGGTTCGAATA	
    557202	    47	 100.0	    29	...............................................	TATGGTAAAGACTTTGCGTCGCCTGATTA 	
    557278	    47	 100.0	    29	...............................................	TCACGTTCGCCTCCTTCCGGGCACTAGAA 	
    557354	    47	 100.0	     0	...............................................	|                             	
==========	======	======	======	===============================================	==============================	==================
         7	    47	  99.1	    30	GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTAGAAACAAC	                              	       

# Left flank :   GGAACTGAACGGTCGCCAAGCTGTACGCAAAGGACCGTGGAAATTGGTCCACATGAATATCCGTGGTGACAAGCCCTATTATGAATTGTATAACTTAGCTTCCGATCCATCGGAACGGCATAATATACTGGATCAGTATCCTGAAAAAGTAGCGGAACTGAAAAATATCATGGTTCGTGAACACAGATCGGACCCAAACTGGCCGCTATTACCGAGTGAAAAATAACCTTCCAAAAAGTTTGTTTCCAATAACAAAAATGACCTCTTCCTGCTTAACGAGTAGATTACTATTTACTCGATAAGTAGGTAAGAGACAACATATCAGATCTTAGTATATAGTAAAAAAATCTTAAAGTATCTGATATTAGAATTAATGGTTGGGATCTTAGGAATCATAGTCCTTAAGTATATGTTGGTATAGAAAAAATTTCATAATATGGCTAATTATAAACATATTCATATTTGTAGAGTATTATATACTTTGCATCTACATCTCCAAA
# Right flank :  CTGATTTATCATTATCAATTGTTAATCAACAAATTACACAGCAAATTAGAATAAAAAAATGGATGTTGTTTCAAAGATAAAATCCCACTATTAAGCGGGATTTTTCTTTTTAAAACAGTTCTAATTGCTGCCCTGGAGTACTCACCTCCATTGTCTTTTTACCATAAAACAGTTCGATATTTCCAAACTGCTTATCCGTAATACACATAATTCCGACACTTCCATACTCTGGAATAAACGATTTAACCTTTTTTATATGCACAGTTGCATTCTCGCTACTGGCACAATGACGGACATAGATAGAAAACTGAAACATTGTAAATCCATCCCTTTGCAGATTCTTTCTGAAATCAGCATATGCCTTTTTCTCCTTCTTCGTTTCAGTAGGCAAATCAAATAATACAAGTACCCACATAACACGATATTCGCTAAATCGGTTCATAACTACATTTCCGGATAAGAAATTTTGCGCAACTCTCCACTGAAGCACTTATACAAGG

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTGATTTGCTTTCATTTTAGTATCTTTGAACCATTAGAAACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:70.83%AT]
# 	Reference repeat match prediction:         F [matched GTTGTGATTTGCTTTCAAATTAGTATCTTTGAACCATTGGAAACAGC with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.30,-2.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [4-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.78   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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