Array 1 116961-115843 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QRPI01000004.1 Roseburia intestinalis strain AF36-10AT AF36-10AT.Scaf4, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	====================================	========================================	==================
    116960	    36	 100.0	    36	....................................	AACGCCGGAACAGACGTTAAATTATAGGTTGTATAA    	
    116888	    36	 100.0	    36	....................................	ATCATATGTCACTTGCAAATCTTTTAAGATGTTTCT    	
    116816	    36	 100.0	    37	....................................	CATGATGATCTCGACTGTGCCGGCTGCATGAAGTCCG   	
    116743	    36	 100.0	    37	....................................	GGGAATATGAAAACGAAGAGTATCGAATGATTGCTCT   	
    116670	    36	 100.0	    37	....................................	GAAACACTAATCTGTCCTGTCATAGCTGTTAAAACGC   	
    116597	    36	 100.0	    35	....................................	GACCTTTAAAACCTGTTTTAAAAATATATCTTGAA     	
    116526	    36	 100.0	    33	....................................	ATTGATGCAGAGATCATCAATATCCATACTATC       	
    116457	    36	 100.0	    37	....................................	TGTTCCCATTCGAAAATTCCTCATTTACTTTCTGGTT   	
    116384	    36	 100.0	    34	....................................	TTAATCTGCAAATTCCGACAAATTTCTCAACTAT      	
    116314	    36	 100.0	    40	....................................	GAGTGTATTCCTCCGGTTTGGTCGTCAACTTAATACTCCG	
    116238	    36	 100.0	    37	....................................	GCGCCGGTGCTATCACACTTCCATGCTTCCATTGTTT   	
    116165	    36	 100.0	    33	....................................	TAACCACTAACAACTGCATACTGTGTATCACTT       	
    116096	    36	 100.0	    36	....................................	TGTTACATCGAGTTTGTAAGCTTTGTAGAAGTTTTC    	
    116024	    36	  88.9	    40	.........TA.........T.G.............	TTGTCATTCATTTTCATAGGCTGTGCCTTATCCTGTACAA	
    115948	    36	  86.1	    34	.........TA.........T.G............G	GTTTTTAGTTTCGCTTGTAGTTCGGCTATTTGAG      	
    115878	    36	  88.9	     0	.........TA.........T.G.............	|                                       	
==========	======	======	======	====================================	========================================	==================
        16	    36	  97.7	    36	ATTGAGATAAGAGAACCCCGATAAGGGGACGAGAAC	                                        	       

# Left flank :   TTGACACGACAATCTGCCCGTATCAGATGGAAGATATCATAGAAGCACTGAATATTTTCCAGAATATCTGTAACCGGTATTTTTATGCAAGATTCCACTGGGAGGCAAAGGAAAAAAATACAGTATGGTTAGGTGGAGGATGTGGTTTTCTTTCAAAGACGGTTTTATATCCATTGCTTGGCAGTAATGCAGTAAAAGTTGTGGATAATGTGTTTAAAAATACACTTGGAAAAAATTATGTTGTGCATAAACATACCAAAGACCTGCAGCTTAAACTGGCACCGCATGTCTGTAAGTGTACAAAGTATCAGGGAAAGCTGTATCATATGGGGATGGGGAGGATTGAATTTGAGGAAATATGACAATTTTGCGCCGATAGGCTTAAAATCAGGCTTTGTGGATGTTATACACCAGTTTGATATTGAGGTTTCTCTCATTTGCGGGTTTGCCCCGCAAATGGGGGATAAAAGCCTTGTGTTTTGGGAGGTGTAGGGGACAGG
# Right flank :  CTTTAGCTGTTTTTGTTATATACTTACACAAGTATAATTGAAAAAATCTTCAGTAAGGGGACAAATAAAAACAAGGGAGGAAACACATGAGTTATCTTTATGTCAGTGAACAGGGTGCGAGTATCGGGATAGAAGCAAACCGTTTTCAGGTAAAGTACAAGGATGGAATGATAAAAAGTATTCCAGCAGAGACGTTAGAGATGATCGAAGTATTTGGCAGTGTCCAGATTACGACACGCTGCCTGACGGAATGTTTAAAACGGGGAGTGAATATCCTGTTTTATTCCACAAGCGGGGCGTATTATGGAAGGCTGATCTCAACTTCCCATGTGAATGTGCAAAGACAGCGTATTCAGGCGGAAATCGGACACAATGAAACATTTAAACTGGAAATGTCAAAAAGAATCATTGATGCAAAGATTCGCAATCAGGTTGTTGTTTTGCGCAGATATGCGCGAGGCAGAGATGAAGATATTCATAGAATGATCATTGAGATGCAG

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTGAGATAAGAGAACCCCGATAAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:52.78%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.30,-7.60] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [13-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-43.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.78   Confidence: MEDIUM] 

# Array family : NA
//