Array 1 1880-2089 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXOQ01000279.1 Acinetobacter baumannii strain MC69 279, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 1880 30 96.7 30 .............................G TCGGCACAGGTAGCAGTTGAGCAGTCATCG 1940 30 96.7 30 ............................G. GTTCTTTCATAACGTAGGCTTTAATGCCTG 2000 30 100.0 30 .............................. CGTTTCCGCAAATCTGCGAAATACTCGTTG 2060 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================== ================== 4 30 98.3 30 GTTCATGGCGGCATACGCCATTTAGAAAAA # Left flank : GCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TATAGTGGCA # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-13.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 13-2625 **** Predicted by CRISPRDetect 2.4 *** >NZ_QXOQ01000169.1 Acinetobacter baumannii strain MC69 169, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 13 30 93.3 30 ............................AG TTTGAACATCTAATAATTGAGCTGTAATAC 73 30 93.3 30 ............................GC CTCCAATTGATCCAATTGATCAACCTCCAT 133 30 96.7 30 ............................A. ATGGTGGTTGTTATAAACCGCCTAATGATA 193 30 96.7 30 ............................A. TAGAAGACGTGGACTCCCCCAACCTTTCAA 253 30 100.0 30 .............................. TGCGCTCTTGCGGTTATTATCAAAGACCTC 313 30 93.3 30 ............................AG CATGTGCTAAATCAGGGAAAAGAAAAGCCA 373 30 96.7 30 .............................A ATTATAATCGCAATAGCTTCAATACTCCTA 433 30 93.3 30 ............................AG TGCGTGAACATTATTCTTTCTGCATCAGCT 493 30 93.3 30 ............................CG GTACGTTCAACGGTCAGCAGATTTGTGTTA 553 30 96.7 30 ............................A. TAATAGTAATCGTAGTGGCGGTGTGTCAAT 613 30 100.0 30 .............................. AACTTGCTTACGGCCAACACCTGTAATCAA 673 30 93.3 30 ............................AG CCAACTTAATAGTAGAAAGGTAATGCCCTT 733 30 96.7 30 .............................A CCAAACCAATCAGCAATGGAAAAACCACCG 793 30 96.7 30 .............................A TAAAACGCGCAAAAAAATATAAGGGACGTA 853 30 100.0 30 .............................. AAACTGATTTACAAGCTTGATCAGTAGGCC 913 30 96.7 30 ............................A. CATGAAGCTTATTAAATGACTGACATGGCT 973 30 93.3 30 ............................AA AGATTCTAGCCCCCTCAATTGAGAAGTTAT 1033 30 96.7 30 .............................A TTTAGAAAGCTTGGAAAATAAAGGTGACTG 1093 30 100.0 31 .............................. TGCCGATGCGTGCAAACATTTGCTCCGCTTC 1154 30 100.0 30 .............................. ATAGATGGCTTTAACTGACTCCCAGCCCAT 1214 30 96.7 30 .............................A TAAGAAAAATGCAAAAAAGGCATTTATTAG 1274 30 96.7 30 ............................A. ACACATGTTTTTCTAATAAGAATAAGACAA 1334 30 100.0 31 .............................. ACCAGATAGCAACTCTCTAGGTCAGATAGAC 1395 30 93.3 30 ............................CC AGACTTGATTTTTATCACCATTGAAGAGTT 1455 30 96.7 30 .............................C AGGTAATAAAAAACCGCCCGAAGGCGGTAT 1515 30 96.7 30 .............................C AAAACGTATGGGTTATTGATGCTCAAGATT 1575 30 96.7 30 .............................C GTTGCTACGCGCCACGGCGCACCCATCGTT 1635 30 100.0 30 .............................. GAATCGGCCGCTTTGCGTATAAACACCACC 1695 30 96.7 30 .............................A AAATCACATCAGGGAAGTGAAGGCGAGCTA 1755 30 93.3 30 ............................GA GAATGATTTAAATTGCATTAAGCCTTTAAA 1815 30 96.7 30 .............................G GAAGTCATGAATGTAGGTGTTGAGGATGGC 1875 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 1935 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 1995 30 93.3 30 ............................GA CCCATAAATCAAACAAGCCAACATAATTGA 2055 30 100.0 30 .............................. CCTCAACTGACATTTCCAAATAGTAGAGGC 2115 30 96.7 30 ............................A. AAAGCGCACAACCCATTGATTTGTATTTTT 2175 30 93.3 30 ............................AG CAAATAGATCAACTGGTGCGCCCTGTGAAT 2235 30 93.3 30 ............................GA GATTCAAGTTTCACCGGATGGCACAAGTAA 2295 30 96.7 31 ............................G. AAAAAAGAGCATTTCCAGCAAAAATTGACGA 2356 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 2416 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 2476 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 2536 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 2596 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 44 30 95.2 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : TTCTAAGCGGGAG # Right flank : TAAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.28 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.26, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [10.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //