Array 1 12859-11561 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QJOQ01000023.1 Lactobacillus helveticus strain FAM8102 FAM8102c1c1_scf0023, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     12858	    32	 100.0	    35	................................	ATTGATAAAAGACTGATACATGTGGCGAGTAACCT 	
     12791	    32	 100.0	    35	................................	AAAGACGTGTGAATGGTCAATGGATCTTGTACAAG 	
     12724	    32	 100.0	    34	................................	GTATTCCAGCCAAAGCAGATGGCTTTGCCACCTA  	
     12658	    32	 100.0	    35	................................	ACCGGTGAATCGTAAATGTTAATCGAGCCACCAGC 	
     12591	    32	 100.0	    35	................................	ATAGCGCTATTAACAAACAAGTTATGCAACCGCTT 	
     12524	    32	 100.0	    34	................................	TTTTGACTTTTGCTTGTTACGACTAATCAGGAAA  	
     12458	    32	 100.0	    35	................................	AATCTATGTAAATAAGAAGTGTCAGAAGTTAAGCC 	
     12391	    32	 100.0	    34	................................	ATATGCGTCAGTTTCGCTTTCATGGTTAAAGCAT  	
     12325	    32	 100.0	    35	................................	ACTAATGGAATATCCTTCATGCGCAAGCCTGTAAA 	
     12258	    32	 100.0	    34	................................	TTTAGTGAACAAACTCCGTTGCGATACCGTCACT  	
     12192	    32	 100.0	    35	................................	TAAAATACAGTTGACTTTTTAGAAGATTTAAGTAA 	
     12125	    32	 100.0	    35	................................	TAATATCTGTGAAGCAAACAAGGATCACTTCCTTG 	
     12058	    32	 100.0	    34	................................	TTAAACGCCTACAAAGAACGTCACAATGCAAACA  	
     11992	    32	 100.0	    36	................................	GTTTTCGGGTGTCGGGTTTAATGGAGTGGTATCGGC	
     11924	    32	 100.0	    34	................................	ATCAAAGCTATCCTGCTATTGCTGATGGCTGGTG  	
     11858	    32	 100.0	    34	................................	AGTTTTTGAACGCAATTCATTACCCGGTTTTTTC  	
     11792	    32	 100.0	    34	................................	ACTAATGAAGTAATCAGTAAGGTGTTGGGTTACA  	
     11726	    32	 100.0	    35	................................	TACTTAGATGCTGAAATGAACTTAGACCCGTGGAT 	
     11659	    32	 100.0	    35	................................	AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG 	
     11592	    32	 100.0	     0	................................	|                                   	
==========	======	======	======	================================	====================================	==================
        20	    32	 100.0	    35	GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT	                                    	       

# Left flank :   GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGGGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG
# Right flank :  TTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCTGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT

# Questionable array : NO	 Score: 9.26
# 	Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     F [10,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-2.50,-3.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,9.64   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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