Array 1 64278-62479 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFJSY010000039.1 Streptomyces sp. KC 17012 contig39, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 64277 29 96.6 33 ............................A CACTCCCGGCGACGTGTAGTCGGTCGCGCTGGG 64215 29 96.6 32 ............................T CCGTTATTTCGTGGCCAACCTCGAACCGTTCC 64154 29 100.0 32 ............................. ACCTCCCGCTGGTGCTCCATGGTGCGCGGGGT 64093 29 100.0 32 ............................. CGGTTCGGGACACTCACATCGGTGGCGACCAG 64032 29 100.0 32 ............................. TGGGTGACCTGCGAGCCGCTGCTCTTGCCGGT 63971 29 100.0 32 ............................. TGGGTGACCTGCGAGCCGCTGCTCTTGCCGGT 63910 29 100.0 32 ............................. TGGGTGACCTGCGAGCCGCTGCTCTTGCCGGT 63849 29 100.0 32 ............................. TGGGTGACCTGCGAGCCGCTGCTCTTGCCGGT 63788 29 100.0 32 ............................. TGGGTGACCTGCGAGCCGCTGCTCTTGCCGGT 63727 29 100.0 32 ............................. GTGCCGTAGTTGGCGCGGTAGAGCTTGCGGTT 63666 29 100.0 32 ............................. TGGCGGGGACGGGACGGCCGATCCCAGCCCGG 63605 29 100.0 32 ............................. GACCGGCAGCCGTCGAGGAGCAGTACCCCAAC 63544 29 100.0 32 ............................. AACCGGCTCACCGACGCGCAATTGGACCAGCG 63483 29 100.0 32 ............................. CGCACCAAGAACAACACCCGCGAGTACCACAT 63422 29 100.0 32 ............................. CGCGAACTCGTCCTCATCGCCCGCCAGATCCT 63361 29 96.6 32 ............................T CACGGCCCCGGCGCGTACGGCATCGTGGAGCC 63300 29 96.6 32 ............................T CGGGCTACGTCAACCGCCTCAACGCCGCCCTC 63239 29 100.0 32 ............................. GTGAGCCTTCAGCGGCTCGGTGTCGACGCTGA 63178 29 100.0 32 ............................. ACGCCGCCGCCGTCGCCGAGCTCCGCCAGTTC 63117 29 100.0 32 ............................. CCCAACTGGGTGGAAGAACGGCGCGCCCCGAT 63056 29 100.0 32 ............................. AGCGCCACGTCCGACGTCGCCGCGGTCAGACC 62995 29 100.0 32 ............................. CGGGCCGTCAGCCTCCCCAAGATGCGCGCCCG 62934 29 100.0 32 ............................. GGATCGCGGCGCGGGCGGCCTTGACGTTCTGC 62873 29 96.6 32 .C........................... TGGGACAGGTCCCATCCGGTGCGGCGCGGGCT 62812 29 100.0 32 ............................. CCCGACAACAAGGGCAAGGACACCCCGATGAC 62751 29 93.1 32 C..............C............. TCCAGCTCGTCAAGAAGGGAGTCCTTGGTCGG 62690 29 100.0 32 ............................. ACGGTGGCGGCCACGAGGAGCGCGGCGGTGAA 62629 29 96.6 32 .....................G....... TACTCGGCTCGCCTCTTCGAGGACTTCCCCGC 62568 29 100.0 32 ............................. GTCGGTCATGGTGTGGATCTGCCAGGCGGTGA 62507 29 86.2 0 .............T....C........AG | ========== ====== ====== ====== ============================= ================================= ================== 30 29 98.6 32 GTGCTCCCCGCGCCTGCGGGGATGGTCCC # Left flank : TTACGGCGGCGGAGCCCATGATCATGACTCCTACGCCGACGCGGAGCTGTCCTGGTGACCGTCATCGTCCTCACCAACTGTCCGCCCGGCCTGAGAGGCTTCCTCACCCGCTGGCTCCTCGAGATCTCCGCAGGCGTCTTCATTGGCAATCCGTCCGCCCGAGTCCGCGACCTGCTCTGGGACGAGGTCCAGCAGTACGCCCACCAGGGCCGCGCCCTCCTTGCCCACACGACGAACAACGAACAGGGCTTCACCTTCCGCAGCCATGACCATGCCTGGCATCCGGTCGACCACGAAGGCCTGACCCTGATCCGCCGCCCGAACACTCAGAGCTCCTCAAACGGCCCGAGCGCGCCACGAAAAGGCTGGAGTAACGCATCCAAGCGACGGCGGTACGGCAAAGGCTGAGGTGCGCAATGACCCTTATTTCCTCTATGTCGGAGTCGGTGAAACTGCTTCAGAATGACCTGTCTCCGTGGCAAAGCAGCAGGTCATAAAGT # Right flank : GCAACCGGTAACTGACCGGCTTCAAAAATGTCGAGTGGAAGGCTACGGTTCACGCGCCTCGGGCCCTCAGGGAAGAAGTCAGCGAGCGTCGCAGGCCTACCGTACTGACAGCGTTGGCCGCCCGGCGACCCGCGAGGCCACTCGATGAACGCTATGCCTAAGCGGGCGTGTGCCGCGTACTCGAATGCCGCCACTCGCCTCGATCGGCCGCTGCTGGGTACGTTCATGGTCGTGTCTGGCGCACGCCGGGTTGGTCACCCGTAGGCGTGCTCCGGTTGATCGCGCGCGACTAGGGGAGCTGGTACGGGCATGGCGGTTGACGCTGCTCGATCGGAAGAGGGGTTCACGTCGGCGAGGGCTGCGCGGGTGATGGCTGCCGCGTGCCGGGCTGCTGGACTCGACGACAGAGGCGCGGAGTTGATCAGGCTCGGGGAGAACGCGCTGTTTCGGCTGGCCTCCGTGCCGGTAATCGTCCGTGTCACCCGTGGGGAAGAGTGGTT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCTGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCCTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 73931-75670 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFJSY010000039.1 Streptomyces sp. KC 17012 contig39, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 73931 29 100.0 32 ............................. GAGCCGCTGAAGCGGGGGAAGAGGCGGTAGTC 73992 29 93.1 32 .......................A....G CCGCAGGACCCCGCAGCCGCACCGGCAGGGCT 74053 29 100.0 32 ............................. TGCGGGCTGAAGTCGAGCGAGCCGGGCACCGA 74114 29 100.0 32 ............................. ATGCGTGGGTTGGTGGTGACGTTGTCCTCGGA 74175 29 100.0 32 ............................. TGCTCAGCAGCAGGGTGCCGGACTTGCCCATC 74236 29 96.6 32 .....G....................... GGGGTCCGCTTGTAGCCGGCGGTCCGGCCGAA 74297 29 100.0 32 ............................. TGGCAGACCGCGTACACCGCGTGGGATCTGAA 74358 29 100.0 32 ............................. TGCATAGCCACGGCGCGCCCCTCAGAGGTTGG 74419 29 100.0 32 ............................. ACGGGGATCGGCATGGGCCGGTCGTGCGGCTG 74480 29 100.0 32 ............................. GCCCGCGACATGGCCACACTCGACACGGACCC 74541 29 100.0 32 ............................. TCGGTTGTCACATCATGCACGTTGGGAGACGA 74602 29 100.0 32 ............................. GATGAGGGCCGGAACGGTCACCGCGACGTTCA 74663 29 100.0 32 ............................. GATGAGGGCCGGAACGGTCACCGCGACGTTCA 74724 29 100.0 32 ............................. CAGCCGATGAAGGCCTTCACGCCCAGGCTCGT 74785 29 100.0 34 ............................. CCCCCCGTCGCGCTGCGCCCCCCTGCAGACGACG 74848 29 100.0 32 ............................. ACGAACGCACAGATCACGATCATGCATTCGGC 74909 29 100.0 32 ............................. CCGCCGGTCGTGGTGGTGACGGCGCGCACGTA 74970 29 100.0 32 ............................. TCTGGCACGGTGTGGGGGGAGTTGACCATCAG 75031 29 100.0 32 ............................. CACAACGAGTACAAAGTCGCCGTCCACGAGGC 75092 29 100.0 32 ............................. TCTGGCACGGTGTGGGGGGAGTTGACCATCAG 75153 29 100.0 32 ............................. CACAACGAGTACAAAGTCGCCGTCCACGAGGC 75214 29 100.0 32 ............................. TCCAAGGCTCCGGCGACATCCAGTGCTCCGTC 75275 29 100.0 32 ............................. CGGCCTGTCATTGACGCCTTCAGGAACGCCGG 75336 29 100.0 32 ............................. AACGACGTGCCCTACGACCGGCGCAAGTCGTA 75397 29 100.0 32 ............................. ACGGCAGGGGCGTCGACGGCGGCCGCCGTGCG 75458 29 96.6 32 ....................A........ GAGCTGTACATCTACGGCGCCGGTTCGTCCGG 75519 29 100.0 32 ............................. TGCGGCTACTTGCTGTCGTCCTGCGGCTTGGC 75580 29 100.0 31 ............................. TCGGCGCGGGGCGTCGGACAAGGACCGGCTG 75640 29 82.8 0 ........T.....T......C.A.A... | CC [75661] ========== ====== ====== ====== ============================= ================================== ================== 29 29 98.9 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : GCCTTCCCGATGTCATGCACACCGGCCAGCCACACCACCAGCCGGCGCGCATCCACCTCCCCACCAGGAAGCACGCTGGCGATCAGTCTCCGCACGGACAGCGGCAACCACTCGTCCCACAACCGCCCGGCCACGGCGGCGCTGTCCTCCATGTGGCGCCACAAAGGCAGCCACCTGTCAGAATCCCGCTCGTGCTTGGCCCATACGCTCAACGCCGGTTTGCCCAGCCGGGCGCGTAAAACCACCGGGGCGCCCCCTTCGCCTGTCATGCCAGATACATACAGGATGTAGATGATGCGTGAAGCCGATATGGAGAAAACGGAGAGGGTCTAACGTCAGCAGAGAACGCTGCACAGACGCCAGCACGAGGACGATCCCGCGTGAATCCGCAATCGTCCGCCGCGACGGGAGCCCGAGAGACCGATAAGGGCGTTTCGCCGGACTCTATGAAACTCATGGAAGCCCCAGCACCTGGGCTATAAACCCGCAGACCACGTAGC # Right flank : CACTCCACCTCCGAGTGGATCGCCGAAGAGCCTCCAGGCGGCGGAAGAGGCGTCCTCGGCGTCTCCTCCGCGGGTGCCTGCCGTCCAGACCGCGCCTTGAGCGCCCTCAGGACGGCAGCGGCGTCTCCCTCGCTACCGTCCTCTAGCGCCGCCACGATGCGCCGTAACGCCTCGCTCACGTCAGTGAGAGTGACCGCTGGTCGGAGCGTCCTTCTTGACCGTCAACGGCAGCAACTTCTTCCCGCTGTTACTTACTTGTGGCCAAGTGTCCATCTGCGGGCACACCCCGCAGTCAAAACACGGCGTCCAGCGGCAGTCCTCGACCTCTGTTTCGTCGAGGGCGTCCTGCCAGTCCTCCCAGAGCCAGTCCTTGTCGAGGCCGGAGTCGAGGTGGTCCCAGGGGAGGACTTCCTCGTAGGTGCGTTCGCGGGTGGTGTACCAGTCGACGTCCACGCCGTAGGGGGCCAGGGCCTTGTCGGCGCAGGCCATCCAGCGGTCGT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //