Array 1 4391-1739 **** Predicted by CRISPRDetect 2.4 *** >NZ_RWIA01000045.1 Phocaeicola vulgatus strain CL14T03C19 contig0045, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 4390 33 100.0 33 ................................. TGTGGATACAATAATCACATTGACCGCAATCTA 4324 33 97.0 33 ................................A GATTTCTCACTAGCTAACTGTTGCAAAACAGCT 4258 33 97.0 33 ................................A AATTCTGAGCCTCAGTAGACTGATCCAGAGCAG 4192 33 100.0 32 ................................. AGCTCGGTCCAAGGGATTAAAATCACTCATAA 4127 33 97.0 33 ................................A ATATCGACATCGCTAGAACAGTTAACAAACCTA 4061 33 100.0 33 ................................. CCACGGATTGCGTTTTATAGATAAAACTACGAA 3995 33 97.0 33 ................................A GCAAGAGAGGCGAGAGACTGAAACACGCCAGAA 3929 33 97.0 32 ................................C CCTAATGCCATGATTTCTCGTGGCTTAAATCC 3864 33 100.0 32 ................................. TCCTTGCTATTGGCAAATTGCTATTCCCGGTA 3799 33 100.0 32 ................................. ACCGTTGGAAACCTTACCGACAATGTTGTCGG 3734 33 97.0 32 ................................C GCTGTGTGTTAATTAAGCGAAGCCCCTAGTTG 3669 33 97.0 33 ................................A ATTAAAGAAGAAAATGATTTTATCGAAGTTGAA 3603 33 97.0 32 ................................A GGCTGATATGACTCAGATTTTGTTGAATCAAG 3538 33 97.0 32 ................................A AGGCACTGTGCCGTATGACCGGGAACTTAAGA 3473 33 97.0 33 ................................C TAGGAGATGCGTATTGAACGTATGTTGGTGTGT 3407 33 97.0 32 ................................A CAGCCAACGAAATTCGACCAGTTCCGGACCAA 3342 33 100.0 32 ................................. TCCGTAATTGGCATTTGCCTTCCTTCGGTTCT 3277 33 97.0 36 ................................A GAATAATCCAGGACGTACTGTCTCCGGTTCTCTAGG 3208 33 100.0 34 ................................. GGCAATTTTGTTGGTGCATTTCGTCCCGGTGCTA 3141 33 97.0 33 ................................C CTTGCTGAAGCTAAAGCCTCAGAAGCTTCTGCT 3075 33 97.0 32 ................................G TATTAAAGTAGGTCGTAAAGTGATGTTTAGTA 3010 33 100.0 32 ................................. ATCCAAGTTCTGCACAGCATATACCTGGAAAT 2945 33 100.0 32 ................................. ATACCTGTTTTAATGATAAACATAATACGACC 2880 33 97.0 32 ................................A TACTGGATTCCGTGCTGGTCTTGCTTATCAGC 2815 33 100.0 32 ................................. GCTCAGGAAGCGCAGATTTTGCTTGATGCTAA 2750 33 100.0 33 ................................. CCTATCTCTTGTCCATAAACGTACAACTCACAC 2684 33 100.0 32 ................................. ATTGGGCTATGAATCGGGATCTTATGGACTTT 2619 33 97.0 31 ................................A TTCAGTACCCGTAATCGTCGCCAGGTGATTG 2555 33 100.0 32 ................................. ATGATTGCATCTACTAATACTGGTAAGGCTGC 2490 33 97.0 34 ................................C TAAATTAGGTACGTGTTAACATACTTTAGGACTA 2423 33 97.0 31 ................................A ATCAAAGAAAAAACTACTGGTCGTGATGTTA 2359 33 100.0 32 ................................. GCATAGTGATTATGAGGATGTCATAGGCATTT 2294 33 97.0 32 ................................A AAAACCAATAATACCAGGCGATTGCCCTACGT 2229 33 97.0 34 ................................C TTTCGGATGCCTAAAGATACACCTATTAACAAAA 2162 33 97.0 32 ................................C TCATTACCAGACACTTACAACAAAATTTAACA 2097 33 97.0 32 ................................C TATAACGCGCGTATTGTAGAAAATACTCCATG 2032 33 97.0 31 ................................A TCCTTATATGTAAATCGAAGCATTGATAGTA 1968 33 100.0 32 ................................. TCTTCGAGCAGATAGGACACATACCCACGTCT 1903 33 100.0 31 ................................. CCTGTGCCAGACTTTCCAAACTTCTGCCTGT 1839 33 97.0 33 ................................A ATGACGAGGTGAATACGTGTATAGACAACCATA 1773 33 90.9 0 ....................A.........G.A | TA [1750] ========== ====== ====== ====== ================================= ==================================== ================== 41 33 98.0 32 GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Left flank : ATATTGACGATTATCCGGTATTTCTTATAAAATGATTTTTAATTATGTACATTCTTGTGACTTACGATGTGGATACTACAAGCAAAGAGGGGGCTCGCCGTTTACGATGTGTGGCCAAGGCTTGTCTGGATTATGGACAGAGGGTGCAGAACTCAGTCTTTGAGTGTGTAGTGACGGAAGCGCAATATTCTCTTCTAAAAGGGAGAGTTAGGGATATTATTGATATGTCTCTTGATAGTGTTCGTTTTTATATTCTTAGTAAAAATGAGAATAAGAGGGTGGAAGTAATAGGTGTTGAAACGGCGTATAAACTTGAGGAGGCTCTTATAATATAATGCGAATGTGGTGTGTTACAAAAAAAGTAGTATCTTCGCATGTGTTAATAATCAGTAGATTAAATTATTTGTAGGGTATTTCTTTGTTATGAAGTTGAATAATAATGATGATTCGCATAACAGTGGATTAAATTTGCTGATTTATAATATGTTATTAGATATAGA # Right flank : TTGTTCACTCGTTGGTCAAGTTTATGGAAGAATTGTAAGCATTCGGCCTCTTGTGTATTTCTCTTCAAGCTGTTATAAAATCAAAAGCCAAACGAAGTACGTTAGGCTTTTGACTTTGTTATGACTGGAAAAAACACGCACAATCCCGGATGCTTATCTTTTGTCTGTCTTCTTTTGTGGTTTCACCTAGGTGACAATACATTGGCATCTAAGTGGAGAGGCGTAGTCACCCAAGTGATACGCTTGCTTCACCTTGGTGAAACTATAAATTCAACTAAGCGTTCCAGAGTAAATATATTATATTTTTTACTATACTATTCCTTGTTGTTTATTTGTTATATTGTTGATTATTAATGTGTTATTGTCTGTTTGTGTCGATTGTTTTTTCTTATCTTTATAAAATATATTAAAACATAAACTAACATGGAAATTGGTATAATTGACCTTTGTAAACAAATAGAAGATCCTAGTATGAACCGCAAGAAAGTCCATAAAATGGA # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.54, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACACCCTGCGTGGGTGTGTGGATTGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTGCGTGGGTGCGTGGATTGAAACA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //