Array 1 123414-117747 **** Predicted by CRISPRDetect 2.4 *** >NZ_LGIP01000023.1 Chryseobacterium sp. Hurlbut01 strain Hurlburt01 HurlbutContig25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 123413 47 89.4 30 CACA....................T...................... ACAATGTTGAATCCATTATGCCTGACGATT 123336 47 100.0 30 ............................................... TTTTTTCCTGTCTTTTACGTAGTCTTTTGA T [123314] 123258 47 100.0 30 ............................................... TGGAAAGTGGAACGAAGTTGAAAGAGGGTA T [123241] 123180 47 100.0 30 ............................................... TAGTGTTCCCGTCATAAGTAGTAAACATTG 123103 47 100.0 30 ............................................... AAGACCTTAAAATAACAGAACAGGAATATA 123026 47 100.0 30 ............................................... AAAGCAGGCAATTCATCAATTATAACAATG 122949 47 100.0 30 ............................................... GTTAATAATTGACTTGATTTCAGTAAGGTC 122872 47 100.0 30 ............................................... TTGTGCGTGAGTATATGCCATAGCTGTTAT 122795 47 100.0 30 ............................................... AAATTGCAGAACTGGCAGGATTTAAGAAGG 122718 47 100.0 30 ............................................... GTTCGGAACGTTTAAAATATTAGCTTTATA 122641 47 100.0 30 ............................................... AATTATTTTGATTGTATTAGTTTTTATTCT 122564 47 100.0 30 ............................................... CTGTTACTTCTTGATGTTTTGAATCGATTT 122487 47 100.0 30 ............................................... TTTTAATGTGTTGATTTTCAATACATACAA 122410 47 100.0 30 ............................................... TCGTGTTGTAGTTGTTGCACCACCACGCAT 122333 47 100.0 30 ............................................... TCTAAGTGGTACAAACCAAAAATGTGTAGT 122256 47 100.0 30 ............................................... GCGTAGTAATCTGCTTTTATTTGATCTACA 122179 47 100.0 30 ............................................... TTCCATGATCTTATATTACCTAACGCTAAA 122102 47 100.0 30 ............................................... ATTTTGTGGAGACCCACCGAAATAGAAGTG 122025 47 100.0 30 ............................................... CTTGAATGATGAATGATAATTTACTTTGAT 121948 47 100.0 30 ............................................... TCTCTCTGTTACTTGATTTGCCATAATATT 121871 47 100.0 30 ............................................... TAGTGCATTGTAGGAGCATAAGAACCTCCT 121794 47 100.0 30 ............................................... CATAAAATCTAGACAATGTTTATTATCTGT 121717 47 100.0 30 ............................................... AGTAATTATGAGAAGATCAGGAACAACAAC 121640 47 100.0 30 ............................................... CTGTTATGAAAGCGTCAGAATTGAGAATAG 121563 47 100.0 30 ............................................... AGCTGCATTGATTTCCAGGAATCCAAGCTT 121486 47 100.0 30 ............................................... TCGTGTTGTAGTTGTTGCCCCTCCACGCAT 121409 47 100.0 30 ............................................... CAGCTTTACCGCTAACTCTATCTGTCGGTT 121332 47 100.0 30 ............................................... TTTAACATCGTAGTAATCATACGTTGAGTA 121255 47 100.0 30 ............................................... AATTGTAGAGGTTATTAAATATCCGTGGTA 121178 47 100.0 30 ............................................... TACTATTTTGAAAGACATTATATTGATTTT 121101 47 100.0 29 ............................................... TTGGAAAAATTTAATTGTTGAATTATATG 121025 47 100.0 30 ............................................... GTGCCTTTATATTAAGTTTGAATGTGCCTA 120948 47 100.0 30 ............................................... AAAGACCACCATCACCAACTTTAATAGTCT 120871 47 100.0 30 ............................................... TTGCACGGATAAAATTACTCACAGTAACTT 120794 47 100.0 30 ............................................... AATTGCATTTTGATTTGCAGTCTGAGCGGT 120717 47 100.0 30 ............................................... TCTTGTAGTTGTTGTAGCACCGCCACGCAA 120640 47 100.0 29 ............................................... TTAAGCTTTTTGAACTCCTCGTCTCTCAT 120564 47 100.0 30 ............................................... ATAGTCCAGTTGAGCCTGCGTAACTCCTGA 120487 47 100.0 30 ............................................... TTGCACGAATGAAATTACTTACGGTTATCT 120410 47 100.0 30 ............................................... AGCCATATTTAACTGATATTTATCGGATAC 120333 47 100.0 30 ............................................... AGGTCTTGCCTTTACATATTCTATTATGTA 120256 47 100.0 30 ............................................... TTGCACGAATGAAATTACTTACGGTTATCT 120179 47 100.0 30 ............................................... ATTCTGGGGAGAGCCACCGAAATAGAAATG 120102 47 100.0 30 ............................................... GCACAGTGTTTTGAATTCCACTATAATCTA 120025 47 100.0 30 ............................................... TTGTGCCTGAGTATACGCCATAGCAGTAAT 119948 47 100.0 30 ............................................... TACGAAGATAGTAATAATTTAGGAATCTAC 119871 47 100.0 30 ............................................... CAAAAACAAGGCAAACAATGTTGGTAATTT 119794 47 100.0 30 ............................................... TGTACCGTTTTTCCTTTGTATGTTATTTTA 119717 47 100.0 30 ............................................... CCATTTTTATGTAAGCAATTATAGAAAAGT 119640 47 100.0 30 ............................................... ACCCCTTTTGTAAAGGAATTTCCCAGTTCC 119563 47 100.0 30 ............................................... GATAATTTTTAATTTCGTTAAAACTTTTGT 119486 47 100.0 30 ............................................... TCTTGTAAGAAGATCACGCATTGATGGTGC 119409 47 100.0 30 ............................................... TTGCATCTGGAACGATGGGTCAGAGGTCAT 119332 47 100.0 30 ............................................... CCATCCATTGTTGTAACGCAACTGCCTTCC 119255 47 100.0 30 ............................................... TAGTGGCTGTTATTATAATCTGACAAGACC 119178 47 100.0 30 ............................................... TCTTGTAAGAAGATCACGCATTGATGGTGC 119101 47 100.0 30 ............................................... TTCAAGAAAAACCATCTGCAAAAGATTGAT 119024 47 100.0 30 ............................................... CTAAATGGAATTAATTTCTATTGGCAATCG 118947 47 100.0 30 ............................................... CGTTTCGATTGATTCCGGTTTGATGTTTTC 118870 47 100.0 30 ............................................... ATTCTTTGTCTATAATAACGGGGTAAAGGT 118793 47 100.0 30 ............................................... TAATGAGAACTGGAGTTGTATTTCCGCCCA 118716 47 100.0 30 ............................................... GTCGCAATGGTACAAAAAAGAAGTGATTAG 118639 47 100.0 30 ............................................... ACCTCCAACGTTAACTACAGAACCGCCAAT 118562 47 100.0 30 ............................................... GCAGGAATTATAATCACAATGATGGTTATA 118485 47 100.0 30 ............................................... ATGTGAAGAGTTGGGAGTTTATTTGTTTGA 118408 47 100.0 30 ............................................... TACGAAGATAGTAATAATTTATGAGTCTAC 118331 47 100.0 29 ............................................... TTTTTATATTTAGGAGTAACGCTTTCCAT 118255 47 100.0 30 ............................................... TTGCACGAATGAAGTTGCTAACAGTAACCT 118178 47 100.0 30 ............................................... TCGTGTGGTAGTTGTTGCACCGCCACGTAT 118101 47 100.0 30 ............................................... GTCTCAGAAAGGCGATCGTTGGAAGAAGTT 118024 47 100.0 30 ............................................... AATAAATGAAAAATTCTCATTCGTAAAATT 117947 47 100.0 30 ............................................... ATAGAAATGCTTTTTTCAATACCGAATCAC 117870 47 100.0 30 ............................................... AAAGAATTTCTTTCTATTTACCATATCATT 117793 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 74 47 99.9 30 GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATGACACAAC # Left flank : GATCCTGATCTTCATGACCGCACAGATTGGCTCGATCCTCTGTATTGGTGCAGGAAGAGTACGCAAACGCGCTTTGTAAAACATCGTGTTTCTGTAAATCGGTACAAATATGCTTTGCCTATACAATATACCTCAGCAGGAAGCCAACATCTGGAATATTATGCTGGTGAAGGCTGGTTAGCGGCGGGTGATGCAGCCTGTGCGTTTGATCCATTATCGTCACATGGTATCGCTTTCGCTCTGCGTAGTGGGATTGATGTGGGTATTGCTGCCAAAAATGAATTGAACGGTAATGCAGAAGCAGGACATCATTACGATCAAAACATCCGATTAGCTTTCAGCTTATATAAAGAGCAACGTTCAGCCATCTACCGAAAAGAGACACGCTGGACTGACCATCAATATTGGGCAAGAAGACAACAAGAAGAAAATCAGCAATTGCTAATGACAATATAATTATATGAAACTATTTATTTGAATGGCTTAGTAGTTCATTTACT # Right flank : CTCAAAATTTAACCCTCTGTTTTTCAGAGGGTTTATTTTGTTTTCAGGATTTAAAATTCAGAATAATTCGAGTTGTTGGAAGGTCGGTGGCGGTTCTTCTTTATTTCTGGCAAAAAAGATTTCGATGTCTCCAAACTGTTTATCGGTAATGCACATAATGGCAACCTTTCCGGCTTTAGGAAGCATAAATTTTACTCTTTTGATGTGTACTTCTGCATTTTCCCGGCTCGGACAATGGCGTACATACATCGAAAACTGGAATAAAGTAAATCCGTCATTAATCAAAGCTTTCCGAAAACGGTTTGCATCTTTCATATTTGCTTTCGTTTCGGTCGGGAGGTCATATAATACTAAAACCCACATAATTCGATATGCATTAAACCTTTCGGCGTTCATTTTTGGTGACTATTGTTTGTTTGTCGTAACGTTTGCAGCCCGACCTGAGTGGAGCTCTTTTTCCAGATTTTGGTGCTGGAAAAATGCGGTTGGAAATCTGCAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATGACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATTACACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.10,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //