Array 1 676547-677167 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012672.1 Sorangium cellulosum strain So ce836 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 676547 36 97.2 38 A................................... GACTCGTCGCTCCACGCCACGGCGTCGACCCAGATCTC 676621 36 100.0 36 .................................... CGAGGCTTGCGAGCACGCGACGGCATCGCGCCGACG 676693 36 100.0 37 .................................... GCTCAGCTTGAGCAGGCGCGCGTAGAGCGCGCGATCC 676766 36 97.2 37 ....T............................... GAGATCCCCTTCGGCCGGGAGCCGGGCGTGAAGCAGC 676839 36 100.0 38 .................................... TAAAGCGGGAACACGTACCTCGTGCCGGTCGTGCCCAA 676913 36 100.0 36 .................................... CAGTAGGCCGTCCACGAGCCATCGGGATAAACCGCA 676985 36 97.2 38 .......................T............ ATGATTGCCCTTGCGGGTCAGCTCGTCACGGTGACGGG 677059 36 97.2 37 ..........................T......... GTGACTGCCCAGAAGCTCGTCCGGGGCTTCGGGCTCT 677132 36 94.4 0 ................................C.T. | ========== ====== ====== ====== ==================================== ====================================== ================== 9 36 98.1 37 CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Left flank : AGCCCCCGGGGCGGCGGGGCGCTCCCCCTGGTCGGAAGGCGAGCGCCCCGCGGGGGATGAGGCGGTCGAGGTGGGGGGTGAGTCGGGCGAGCCGGGGGACGAGTCCGGCGAGGTGGGGGATGCGTCGGACGAGGTGGGGACGAGGTGACGCGAGGCTGGGATCGGGCGCGGCGAGGCGGGGGAAACGGCGCTGGAGGCGGGGAGGCGAGCGGCGGAAGTGGGGCAGCGAGCGGCAAAGCGGCCGGGGAGAACGGAGGGGCTGGGCGAGGGGAGGAGGGGGCGTGGTAAAAGAGGGCGGGAGCAGCGGCTGCGAGCGGTGGAGTGACGCGAAAAAGCCGGGGGGCGCTCGCAAGGCCGGCAGGTGTTTAAAAGACGATGGATTTCGAGATGGCCGGAGGCGCGCGGGGACGGCCCCCGGCGGCCGGAGCGGAGGGGGCGGCGGGGACCTCTCGCAAACCGGGTTGTAAGTGCACGAAATTTCAGGTAGGCCTGGGAGGCCT # Right flank : CTAGAACCTCGTCTGGAACGTGTCGCTGCCGCGGGCGGCGCCGATGGCTTGGAACACGAAGGAACCGTCCCTGCTAGCGATGGCGACGAAGGAGGTGGCGCCCGAGGACAGCCTGGTGCGTGCGTTCGAGAAGGTGGCGCAGAACGACGGCGCCCTGGACCGGATCGCCGCAGCGCGGACGAGGTGTGCGCGCACTTCGACGTCGTGCTGCCGGCGCTGCGTCGCGAGCTGCTGGAGGGAAGCCGCCGAGCCGGCCTGAGCCGCCGGGTGTGGGCCCCGAACGCAGTGGGCGGCCAGCGCAGCCTTCGCCTCCTCTCGCCCGCGGGACGCACCAACGGGCGCCTTGTCGATCACCCATCCGAGAGCGGCGCGGACGGGCTCAGCACCGGGCGCAGGCGTGGCGCACCGGGGCTCGCCACCGCGGCGCACCGCGACGGAAGCCCTCGAGTCGGGACGGAGAGCGGCTGCTCGCTGGCCGCCCGGAAGCCGCGTAGGCTTGC # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.70,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 2 8635610-8639542 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012672.1 Sorangium cellulosum strain So ce836 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 8635610 36 100.0 38 .................................... TAGCCCGGGAAGGCCTCGTGCCGCCAGGTCTCCGGGCC 8635684 36 100.0 36 .................................... GAGGATCGGGCGACGGTCGCGCGTTACCTGGAAATG 8635756 36 100.0 36 .................................... GCGTACACGCGCACCGCGTAGGCAGGGCTCCACGAC 8635828 36 100.0 36 .................................... GATGCCAGGAGACATCAATCGGCCGCACATCTTCCG 8635900 36 100.0 39 .................................... GGCCCGAACGCCTTGAACCGCTCCGGAATCGGTGCGGAC 8635975 36 100.0 40 .................................... CCGTCTACGTGCCTCGCAAGGTCTACGGGTCGTTCGCGGA 8636051 36 100.0 39 .................................... AGAGTGACTAGCGCGTGCTCTTGCTCGGAGCGAAACGCA 8636126 36 100.0 38 .................................... TACGACTGGAGGCAGGTCTGCACCAACGGAGCGATCAT 8636200 36 100.0 39 .................................... CGCCGGGGGACGTCGCGGGGCCTGCGTTCAACGGGCCGT 8636275 36 100.0 37 .................................... GAGGAGCTGCTCGAGACGGGGCGCACCTCGTCGAGCC 8636348 36 100.0 38 .................................... TGCGTGCTGTTCCGCACGAACGCCCAGAGCCGCGCGAT 8636422 36 100.0 38 .................................... TGGATGTTCGACACGATGGCCTGCGCGATCTCGAGCTG 8636496 36 100.0 38 .................................... ACCGCGATCCGCATGTTGAGGACCGCCGCCCCTCCCTG 8636570 36 100.0 39 .................................... CTGCTACAGACGCACGCGAGCGGCGGGCTTAGCGACGCT 8636645 36 100.0 35 .................................... GTTCCGGCCGTGCGTCGCCCCAGCACTTCGCGGAT 8636716 36 100.0 36 .................................... CGAGCGTTTCCGATAAATGACATGCGTTCCACCCTG 8636788 36 100.0 35 .................................... GTGACTTCCCGTCCCACCGACGGGGACTGGACGTA 8636859 36 100.0 36 .................................... TACCGGTTAGTCGTGCGCGGTCAATCTGGACGGTGG 8636931 36 100.0 37 .................................... CCGGGTCTGCATATCAATCGTCCGCGCTCCGCCAGCG 8637004 36 100.0 36 .................................... CGCGCGAAGACCGACAGGCCTCGCGGACTGCGCTTA 8637076 36 100.0 39 .................................... TCTTGGGCCTTTGAAAACTGCGTGTTGATGCCCAGCATC 8637151 36 100.0 39 .................................... CGGATCAGTGCGCCCGCGTCGTTCGCGATGATCACGGGC 8637226 36 100.0 36 .................................... TACGTGTCGCGCTTGCCTGGGCTATCGCGCCTGCGC 8637298 36 100.0 41 .................................... TGCGTGTAGCAGTAGCGCCCGGTTGCAGGCGCATCGCAGGC 8637375 36 100.0 41 .................................... ACGCTTGGGATGCACGTAGATCCGTGCGGTAGTCGAGGGAT 8637452 36 100.0 39 .................................... AGCTCAGGAATAGCGTCTCTCATGGCAACTCCTCCTCCC 8637527 36 100.0 38 .................................... TCGCACCTGCGGCAAGGGCTCTGGTCAACGACGGTGAA 8637601 36 100.0 36 .................................... GCCACGCGCCTCGGGATCGAGCGCTACCAGCGCATG 8637673 36 100.0 38 .................................... CGGGTCGAGGAACGTGTCGCGGCAGAGGAGTCGGGCAC 8637747 36 100.0 41 .................................... CCACACATCCGGAAGACATCCTCGCGCGTACGCTGCCCCGC 8637824 36 100.0 36 .................................... CAGTCGTGGCGCAAGCGCTCGGCTGCGCCCCCGATT 8637896 36 100.0 38 .................................... GAGTCGTCGATCTGGTGTCGGCTCTCCGGATAGCCGTG 8637970 36 100.0 40 .................................... AACTTGAACTTCGGCGAGGGCTTCTTCCCCTGGCCCTCGT 8638046 36 100.0 38 .................................... TTCACGAAGTCGAAGAATCCCTCTATCGACCCTTCATC 8638120 36 100.0 37 .................................... TCGAGTTCGACCTTGATCTTCTTCAGCGTGTCGATCT 8638193 36 100.0 36 .................................... TCGTTCGACACGCAGAACGGGTTGACCTCCAGCGTC 8638265 36 100.0 38 .................................... ACGAGCAGGAAGAACTCGGCCTTGCCCATGTAGGTCGC 8638339 36 100.0 36 .................................... TGTGTGATCGAGCGGAGCGACCGCGTTGAAGTCCTT 8638411 36 100.0 37 .................................... TAGAAGATCTTCGGATCGTAGTTGACGGCCATTGGCG 8638484 36 100.0 39 .................................... AACTCGACGCGAACCTGCCCAACTTCCTGGCCGCAGCAG 8638559 36 100.0 38 .................................... CGATTCTTCCTGCCACATTCCTGCCCACGTCCTCAATG 8638633 36 100.0 37 .................................... AGCCAGCGCCGCGCAACCGCGGGAGTCACCCTCATCG 8638706 36 100.0 36 .................................... GTGCCCGTGCGCCGCGCGATCTCAGGCCAGGTCTCT 8638778 36 100.0 39 .................................... AGGTACATGTCGAGCGCCATCGGGCCGTATTTCGCGAAC 8638853 36 100.0 37 .................................... TCATCAGCTCGGAATTCGAGCGCCAGCGGCGGGAGCT 8638926 36 100.0 38 .................................... GCGTCGTACCCCTCGGCCGCTTCGCGCGCGCCCGTGGG 8639000 36 100.0 37 .................................... GGCCTCGACTCCCTGTCGGGCGTCGAGAAGCTCATCC 8639073 36 100.0 36 .................................... ACCTCGTCGAAGAGCGACTCGTAGGCTCTCGCGATG 8639145 36 97.2 37 .G.................................. ACGCCGTGGCCGGTCCCCTTCGGAACATTCCTGGCGA 8639218 36 100.0 35 .................................... TGCCAGAGGCGGTCGTAGAGGATGAGCGTGCCGAG 8639289 36 97.2 38 .................A.................. GAGCAGCTTTCCTGCCTGGCGTTGCAGCTCGATCTTGC 8639363 36 100.0 37 .................................... ACGAGCTAAACGCGCTTTGGCGCGTGCTCACGCAACG 8639436 36 100.0 35 .................................... TTCTCGTAGATACGGATAATGTCCTCGGCCTTGAC 8639507 36 97.2 0 ..............................C..... | ========== ====== ====== ====== ==================================== ========================================= ================== 54 36 99.8 38 CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Left flank : CCCCCGGGGCGGCGGGGACCGCCCCCGGCTCGGAAAGCGAGCGCCCCGCGGGGGATGAGCTGGGCGAAGCGGGGGGTGACTCGGACGAGCCGGGGGATGAGTCCGGCGAGATGGGGGACGAGGTGGAACGAGGCGGGGACGAGGTGGAGCGAGGCGGGGGACGAGCGCTGCGAGACGGGGGCGGCAGCGCAGGAGGCGGGGAGGCGAGCGGGGGAGGTGGGGCAGAGAGCGGCAAAGCGGCCGGGGAGAACGGAAGGGCTGGGCGAGGCGAGGAGGGGGCGTGGTATGAAGAGGGCGGGAGCATCGGCTGCGAGCGGTGGAGTGATGCGAAAAAGCCGGGGGGCGCTCGCAAGGCCGGCAGGTGTTTGAAAAGACGATGGATTTTTGGATGACCGGGGGCGCGCGGGGCGCCCCCGGACGGCCGGTGCGAGGGGGGCGGCGGGGACCTCTCGCAAACCGGGTTGTAAGTGCGCGAAATTTCAGGTAGGCCTGGGAGGCCT # Right flank : CTCGCACCGCGCGAGGTGCTGCTGATGTCCGGCCCCGAGCTCGCCCATGCTCACGTACACACCGCCGCAGCGCCTCGCTCACGCCGCAGCGCCTCGACGCCGGCCGCGCTCGAAGACCTCGACGGCCCCGAGCTCGTCCACATGGTCAGCGTTTCGTACACGAGCCGCGCCGCTGCCCAGGACCTCGGACGTCGCCCCTGCTGGCCTGTCCAGCCCGCTCGCCGATCCTATTCGCCGACCCTATTCAGGGAAACGCAGCGTCTCGACCTTGTTGCCGTCCTGCCCCGTGACCATCCCTTCCTCTTCAAACAACTCCCAGCTCGTGCCGCCCTTGCCCGGTGGTCCGAACTCGTACGTGACCCCCTCGATCTCGAGCTGGTCCTCGTCGAGGTAGGCGATCCCGATCGAGTCGCCGCCGCGCCCGGGACCGCCGTAGCCGCCGGGGCCGCCGTTGCCGCCGTTGGCCCCGTGGCAGGACCACATGCTGCCGTCGCCGAAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCCGCCGCTGAAAGGCGGCGGCCCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.70,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 3 14320980-14324885 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP012672.1 Sorangium cellulosum strain So ce836 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 14320980 36 100.0 37 .................................... ACCGCCTCACAGGGCGGGAGATCGGTCCCCTCGGTCA 14321053 36 100.0 38 .................................... CACTTGCCCCAGACGCTAAGCGTGATGGGCGGTGGCGG 14321127 36 100.0 37 .................................... GTGGAGGTCGACGGTATCACGGGCGACGTGCGCGCAG 14321200 36 94.4 35 ....G..........G.................... GCCCCCGCGGAATCGACCGCCGAACGTGACAGGAT 14321271 36 94.4 37 ...........AA....................... TCGACGCTGTAGCCCGCGGCATCGCGCCGCAGGTAGC 14321344 36 97.2 37 ...........................A........ ACCGGCCTCTACGTCGAGGCGATGCGGCGCTGGCCAG 14321417 36 100.0 34 .................................... GTCCAGCCGGCGCGCGCTTCGGTCGAGATCGTGG 14321487 36 100.0 35 .................................... TCGAATTACGACCAGTTGCCATCGCGCCCGTGCTC 14321558 36 100.0 37 .................................... TCGTCCTGCGGCGACTCGACGACCTGGATGATCGCTT 14321631 36 100.0 36 .................................... TCGCTCGTGTGCAGCCCCTCGAACGCGACGACCCGA 14321703 36 100.0 38 .................................... AACTACGCAGAACTCACGCCGGAACTCGAGCGCAGCCT G [14321705] 14321778 36 100.0 35 .................................... ATCTCCCGCGCCAACGGCGCCGCGGAGCGATCCGA 14321849 36 97.2 33 .......G............................ GCCAGTCTCCTCGACGAGCACGGGCGCATCATC C [14321859] 14321919 35 88.9 35 T..-G..T............................ GCCGACAGGGCGGAGGAGGCGCGGAGACGAACCAT A [14321925] 14321990 36 100.0 33 .................................... GTCGGTTCGGCGCGGCGGCGCAGTGGGGGCCGG 14322059 36 97.2 35 ..A................................. CTGTGGGATCAGACGCACCCGCAGACCACGGAGGG 14322130 36 94.4 38 T..........G........................ TTCGGGGAGCGCGGCGAGTGCGCCCTCGTCCGCGTGGG 14322204 36 97.2 37 ...........G........................ CATCCTGCGCGATCAGAAGAATCGTTGTTCCCTTTCT 14322277 36 94.4 38 ...........G............C........... CGCCACACGTGCGACGACTCGACTGCGAGGCGCTTCGT 14322351 36 94.4 32 .................A..........C....... TGCGAGGTCTGCCCACCGAGTTCCAGCGGGAA 14322419 36 97.2 35 ...C................................ CGGCCTAGACGCGCTTTAATGAGCGGCTGTCCCGT 14322490 36 97.2 34 ...C................................ CCAACTCGCCGTCGCGCCCCGGGGCGCGCCAGCC 14322560 36 97.2 34 ...C................................ CACGCGGACAGCGACGCCAAGCCGCCATGCGAGT 14322630 36 94.4 35 ...........A....A................... AAGCCCCAGGCCGGGCGCGACTACCTGAACGCCCT T [14322634] 14322702 36 97.2 35 ..................T................. CGGATGCTGGCCGCCGCCGCCGGCGCAACGTGGTC 14322773 36 97.2 39 ...........G........................ CTCGAGGTTTACCGCCGGGGCGCGACCACCGCCGAGGAG 14322848 35 91.7 34 ....-.T...................T......... TTGATGTTGATCGTCACGTCTCCGGAGGAGCCGC 14322917 36 100.0 36 .................................... AGCTCGGCGACGAGCTCTTGCAGCGTCGCCTGCAGC 14322989 36 94.4 33 .......G........................T... TCGGTTACCCTCGGGACGAACGATGCGAGACGG 14323058 36 97.2 34 .......G............................ CCGACAGGGCGTTCCAGCGGTCCGAGCGACTCGT 14323128 36 97.2 39 ...C................................ CACATCCGAGCCGTCGAGGACCTCGGCGAGCTGCGGCGG 14323203 36 97.2 37 ........G........................... TCGCACCAGCCGATCGTTGCGCCGGGGTCGATGCCGC 14323276 36 97.2 36 ......T............................. CGCCCCCGCGTCGTCGTCGTCGAGAACGTCGCCAGC 14323348 36 100.0 34 .................................... GTCCCGAAGTGGTAGGGCAGCGCCATGCGCCGCG 14323418 36 97.2 36 .............C...................... TATCCGGCCCACCCGGTTCCGTTCGGGTGGGCGTAC 14323490 36 100.0 38 .................................... AATTGAACCAGGGTTGAACCATTGCCCCTTATCGAAAG 14323564 36 97.2 35 ..................................T. CGGCAATCGCCTTTGCGTTGGGAGTTCGCGGCGCC 14323635 36 94.4 37 ...C.......G........................ AGCGCCGCCAGGTACGTCTCCCTCGGGAGGTAGGTGT 14323708 36 94.4 34 ...C.......T........................ GCTAGCCCCTGCTGCGCCGTGGGCGGCCGACCTG 14323778 36 97.2 35 ........G........................... CTTGATTCCGAGATCCGCCCGTACTCATCGAGGCC 14323849 36 97.2 35 ...........G........................ CTTGATTCCGAGATCCGCCCGTACTCATCGACGCC 14323920 36 97.2 35 ...........G........................ TCCGGTGCATCTCCGACCCTCGCGACGGCGGCAAC 14323991 36 97.2 34 ...........G........................ TTCGGGCACGAGTGGAGCTGGCCGAGGTTCTGGC 14324061 36 94.4 36 ...........TA....................... TACACCGTCCGGAGCTCGTCCACGATCGTGCCGCTC 14324133 36 94.4 35 ...C.......................A........ CCGGACTCGCGCGAGATCCCGTTCTGACCGACCCG 14324204 36 94.4 37 ...C.................A.............. AGCGGCAACGGCGGCCAAGTCCGCTACGAGTTCGTAG 14324277 35 91.7 37 .G...-......A....................... CCTCGCGAGTACCAGTGGATGCGCGATCAACTCTGGT 14324349 36 97.2 35 ...........G........................ GGGGACTTCGTGACGATCGACTTCAGGACCGCCAT 14324420 36 91.7 35 .........A.G.......................T CTCGCCCGGGACGCCCTTCTCGTCCCCCTGCAAGA 14324491 36 94.4 35 ...C.......G........................ CCAGAAGAGAGAAGAGATCTCCGGGCCCACGCGCG 14324562 36 94.4 36 ........T...............A........... CACGACGCCGAGCGCGCCCAGATCGAGGCCACCGCG T [14324564] 14324635 36 94.4 35 ........A...T....................... TAGTCGAACTCCCCCGTGACCGCGCAGAGCACCAC 14324706 36 94.4 37 ...CA............................... CAGAACACGTACTGCGTCGGCCCGTCGTTCCGCGCGA 14324779 36 94.4 35 ...CA............................... AAGGGGGCCCCGGAGTCACCGACCTGGAACCCCAC 14324850 36 88.9 0 ...CA......T.......................T | ========== ====== ====== ====== ==================================== ======================================= ================== 55 36 96.4 36 CCGATCCCCGCCGTGATGCCGGAAGGCGTTGAGCAC # Left flank : CGAGCCGAAGGCGCTGCGCAAGGTGCACAAGGTGCTGAGCGCTTGGGGAAAGCCCGTTCAGTACTCGGTCTTCCGCGTGCGCGGAACGGCTCGAGAGCTCGTGCGCCTGCGCTTCGAGCAGACCGGGCTCGTCGCCTCGGAAGACCGCCTGATGTTCATCCGACTCTGCCCGGACTGCGCCACCAGGGTTACCGTTCAGGGCAAAGATCTTGCGCCGCTCGACCTTGAGCCACCGCCGTTCCGGATCGTGTGAGGCGTAGGATCAAGCATCGGCGCGCGATGCCCGGCGCGCCTCGGTCCTTGACAATCGAACCTAGTGATTCCGAGAATTTACGTCGTGTTGAAGGCTGGGCAGGTGCGTGAATGGCAGCAGATGCGAGTGAAGACGCCGCTGGACGAGGAGCGAGCACGCGGGCGGGGCGTGGACGCCGGCCAGCGGAGGGAGGAGCTTGCAGGGGAGGTGAAATTGATGAGTAATGTCAATGGCTTGTGAGGGCGGG # Right flank : TACGGCGAAGGCATATAGCAATCGACCATGTGTTTCGCTATGTAACTTCCTGAAACTTGGCTCCGCGGCATCCGATCTGTTCCATTGCGAGCTTTACCGAATCCGATACAATAAGAGCGACTAGCCAGCCCTCGATGCGAAAGAAATGTGCGTCGTTCGGAACGTTCGCGGGCTCGATCCGTAGCTTTGTGACCCCCCGGTACTGTCCCGCAAGATCGGCCCGGTGATCCCGCTCTGTCCACTTGGTGAACTCTGACCGGCTCTCGTCGAGGCACTTGACGACACGCAGCGCGTTGAGCACCTCGAATCCGACGTGCCCATGGATTCGCAGGGGAATTCGCTGGAGGTCGTCGTCTGCAACGGAGCCGATCGCTTGCGCAACCCGACGTGTAGCTACAGGGACAGCGAAGCTGGTTAGGGAAAAATCCAGAGGTATGCCAGGTCGAGAAATTGTTGCGATTGGGCTCCCCTGGAAAGCGCTCCCCGCCCAGAATGGCGGC # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCGATCCCCGCCGTGATGCCGGAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.80,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [17-30] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //