Array 1 14482-11445 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKQX01000025.1 Lactobacillus helveticus strain FAM21493 FAM21493_scf0025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 14481 32 100.0 34 ................................ CTCGAGGCTGGGGCGTGCTTAACGGCAAGCAGAC 14415 32 100.0 35 ................................ GTTAGGAATAGCAAGCTTAGCGTCACGCCATTCCG 14348 32 100.0 35 ................................ TCTTAAATTATCTAAACTAACTCCTAATGCATCAG 14281 32 100.0 34 ................................ ATTAATAGCTTAGCATCTTGACGAATCCAGTAAT 14215 32 100.0 35 ................................ TTTTCTTGGACTTTGAATCCTTGAGGGAAAGCTTT 14148 32 100.0 37 ................................ AATTTTTCCACGCTCTTGAGTGATCTGATTCATGATC 14079 32 100.0 35 ................................ AAGGCACGACAAGCTGTAAACAAATTTGCTAAGAA 14012 32 100.0 35 ................................ ACCAATACACCAAGAAGCTGTGACATTAGCCCCTG 13945 32 100.0 34 ................................ TTTTTAGGCAGCTTGTACTTGCGTTCTGCCTTGG 13879 32 100.0 35 ................................ CTTTCTATAACTATGATTTTTTTGTATCAAAAAAG 13812 32 100.0 35 ................................ TCAATAAGTATTTTGACGTTAGTACCTCAGCATCA 13745 32 100.0 35 ................................ AAATAAGAAGGCTGCTAATGATGATGGCCTTGTAC 13678 32 100.0 34 ................................ ATTTAAAGTTAATTTGTTAACATCCACATACCAA 13612 32 100.0 34 ................................ TTAATGATCTTAGCTGTATCAACATGTTGCCTTA 13546 32 100.0 35 ................................ CATTGTTTCTAGCTACAAAGCTAACAGTATAAACG 13479 32 100.0 39 ................................ ATATAGATGTGTAAAGCTGTTTTGATTGATACTTTGAGT 13408 32 100.0 35 ................................ ATATCATAGACACCAAAAACTATTGAGCCGTCTGC 13341 32 100.0 36 ................................ TGTAGCAATAGACCCACGTTCCAGCTTAAGATTAGC 13273 32 100.0 34 ................................ TTTGAAGCCCTGCTGACATTTGGTCAATCTGTTG 13207 32 100.0 34 ................................ TCTGATCTGCTCAGCACGCTGCTCTTGCTTTGAA 13141 32 100.0 34 ................................ ATCTTTGAAAGAACATTGAAGCCAGATTGGTTAG 13075 32 100.0 34 ................................ TGATTAAGACATTATTTAAAAATATTTGGAAATT 13009 32 100.0 35 ................................ TGCTATAAGAATTGCTAGTGCCTTTTGTGTTTTAG 12942 32 100.0 35 ................................ ATTTTCTAATTTATTCTTATTTAGATTAAAAAGCT 12875 32 100.0 35 ................................ AAGATACATTGAGCTGGCAAGAAATGTCAGGTATC 12808 32 100.0 35 ................................ TTTTGCGAGGCGGTCGATCAGTACCATCTAAGAAA 12741 32 100.0 36 ................................ AGCTAATAAATTCACACGTATTGCTTTGGCATCATC 12673 32 100.0 35 ................................ ACCATTCCAAGTAGCATTACTGATTGTGCCAGAAT 12606 32 100.0 34 ................................ TCAAAAGATTTTAAATCAAGACAAGTTTGAAAAT 12540 32 100.0 35 ................................ ACTAACTGGTCAAGCGAGATGAAAGCAAGCCCTGA 12473 32 100.0 34 ................................ AGTTTATTTAGTTATTGGTTTTGGGATTTAGTAC 12407 32 100.0 34 ................................ AACATACTAAATGGGGAACACGTAAATTTTGGTT 12341 32 100.0 33 ................................ AACAGCACGGTTCCAGCCTTTATGGATATTACC 12276 32 100.0 34 ................................ TTTAGGTCTTGCGACTCTGCACTTGAAATGTCAA 12210 32 100.0 36 ................................ ATCAAGAGCTTTTCTTCCGACACGTCTCCCCAGCCT 12142 32 100.0 34 ................................ GTCATTGTTCCAGTTTTCATTGACAGATAGTTGA 12076 32 100.0 35 ................................ GTTCTGCTAATGTCATAATATAGACCTTCTTTACA 12009 32 100.0 36 ................................ AGCATATGGAACGACAACCACGATACTTGTTAAGCC 11941 32 100.0 33 ................................ TGATAGTTTTAATTTGTTCTTAGGAAATGCAAT 11876 32 100.0 36 ................................ GTTTTCGGGTGTCGGGTTTAATGGAGTGGTATCGGC 11808 32 100.0 34 ................................ ATCAAAGCTATCCTGCTATTGCTGATGGCTGGTG 11742 32 100.0 34 ................................ AGTTTTTGAACGCAATTCATTACCCGGTTTTTTC 11676 32 100.0 35 ................................ TTAATGGCTACGCTAACGGCACGACCAATCTAAGA 11609 32 100.0 34 ................................ ACTAATGAAGTAATCAGTAAGGTGTTGGGTTACA 11543 32 100.0 35 ................................ AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG 11476 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 46 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGGGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCTGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //