Array 1 1263193-1262348 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_GL877879.1 Saccharopolyspora spinosa NRRL 18395 Scaffold000002, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	==============================	======================================	==================
   1263192	    30	 100.0	    35	..............................	ATGCAGTCGACCGTCCACAGCGGAAGGCCGGTGTC   	
   1263127	    30	 100.0	    34	..............................	AACAGCAGCAGGACGTGCGCGTGGAGGTGCCAGC    	
   1263063	    30	 100.0	    38	..............................	TGACACCCTGCACGCCACCGTCGCCGCCGCGCTCACGC	
   1262995	    30	 100.0	    36	..............................	GCGCTCACCTCGTCCGGCGAACGTAGCGGCGCTGGC  	
   1262929	    30	 100.0	    37	..............................	GAGAAGCCCGCCGACACGGTGGCCAGCGACATCCCCA 	
   1262862	    30	 100.0	    37	..............................	GCCGACGCGGGCGGGCTAGAAACATAAGTGCGGCCCC 	
   1262795	    30	 100.0	    38	..............................	TTTCCTCAGCAGCAGCTCAAACGGCTCATCGGCGGAGT	
   1262727	    30	 100.0	    35	..............................	CCGAAACAGCCAATGGCCGTCGCCCGGCAGCTCCA   	
   1262662	    30	  96.7	    35	..................C...........	ATCTCCCACAGATTGATGGTGCCGCCACCTAGCGC   	
   1262597	    30	  90.0	     0	...........................GCA	-                                     	Deletion [1262568]
   1262567	    23	  76.7	    36	-------.......................	AGTACCGCCAGGTATCCCTCCACCAACGGCTCATCC  	
   1262508	    30	  96.7	    34	.....................C........	TCGTTGGCGATCGGCTCGGGGGTGCGCTGTTCGG    	
   1262444	    30	 100.0	    37	..............................	GTGCTGGTCACCGAGTCCAACGCCCAGGCCGCGGACG 	
   1262377	    30	  86.7	     0	...........TA..G............C.	|                                     	
==========	======	======	======	==============================	======================================	==================
        14	    30	  96.2	    33	GTCCGCATCGCCCCTACGAGGGGTAGCAAC	                                      	       

# Left flank :   TGCAAATGGGGTCACATTTCACGATCACGCTGTGTAGTAGTTGGTTAAGTTTCGGCAACAGATCCGAACTGCGGTGATGGGCGTTGAACGGCGGTGCGCTGGTTGGCGGCGGTTGTCGCGAGCCTGAACGCGGGTGCGAGTGGGTGTGTTCCGTTCGCGGTGGTGATGTGCGGAAGGGGGCAGTCGAGGGCTGTTGAGATTTGCAGCTGCACCTGCAAGCTCCCACAAGCGATCGGGTACCGGGTCCCGAAGGCGTGGATAGTTTTTGTGGTGGTCAAGTGTGGTTGGCAGGCGAACGATCACGGAGCGGTCGTTAGCAGGGGGACAGGAGAATCCGGATCTCATGGCCGTTGGCGTAGCCTCGGTGCGGTTGCGAAGACTCGAACCTAGCTAGCCTGGTCCAGAAGCCCACGCCGAACACCTGAAGAAGCCGAGAATTGCTGCAAATGCTCGAACCTTGACAAGATCACCATGCTTGCGACCAGCAGCTTTACCGTCGG
# Right flank :  AGGATCTTGAATCGGGTGCCGGAGTTGATCACGCGTATTTACGGACGGCCGGTTGTTTTCATCGTGTTGGGCGGTGAGTTGCGCGAGTGTCTGATCAACAAGTGGTGTCACTTCACATCGGCAAAGTCATCTGCTGCACACGGTGAAGTAGGACCCATCGGCGTCCACTGGTCCGTTGAGTCGTCGCCGTTGGGGACTGCGGTCGCACGTGAAGATCAAGTCGGGGTCAAACCGACAGTGTGGTCGTGGCGAGCTTTTGTCGCTGTGGTCGGGTTCGTGACTGTAGTGCGAGTTTCAGCGGTCGGCCGGTTGTGTTGTGTGCTGGGCAGGTTCTCTGAAAACTGGTTGCAGAGCCCGGTGGGCCCTGTTCGTGTGCGTTGGGCTGAATGGGTGAAGTTGGTTTAGGGTGGTGTCGGCTGCGGGCCGCTGTGCGAGTGAGCGTGCGTCAGTTGCGCAGTGGTCTGGTATCGGCTGGTTCCCTGGTGAGGGGTTGCAACGTA

# Questionable array : NO	 Score: 2.84
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.22, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCCGCATCGCCCCTACGAGGGGTAGCAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-7.20,-8.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [9-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,1.15   Confidence: HIGH] 

# Array family : NA
//