Array 1 281279-280653 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033512.1 Mycoplasma iowae 695 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 281278 36 100.0 30 .................................... GAAACAAATATAAATATTGAAAATACAATT 281212 36 100.0 30 .................................... CCAAACATTGTGTTGTGCTTGGGTCTTGTG 281146 36 100.0 30 .................................... ATATTGTAATTACTACATTATTAAGTTAAT 281080 36 100.0 31 .................................... ATCGATATGTTTTAAGCTTCATTTAATGTAG 281013 36 100.0 30 .................................... TGTTTAATAGTCATTTTAAAAACCTCTTTA 280947 36 100.0 30 .................................... AGCATGTGGAAATGTATCATATGATTTAGT 280881 36 100.0 30 .................................... TATTCCAAGTCATAAATAAGATTATCTATA 280815 36 100.0 30 .................................... TTTCACAAGAAAACGGAACTTGCTATAAGA 280749 36 97.2 25 .................................T.. TTTTTTAAGTATATATACATAGTAT 280688 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 99.7 30 GTTTTGTTTTGATACCATATCCATGTGAACTAAAAC # Left flank : CATCTAAATACTTGCCTAGCACTTGGAACTTTAACTAACGGATAGTTTTCTTTTATTCAAAAAATTGTAGCTTCTACACCATGAGATTTAGGATTAAATTTTTGAATAAAAAGATCTGTGAAGTTTTTGTACTTCAACATAAAAAACATATGACAATTTGATTTTCTTCTAATGTATTTTTTGTGAGCAGTTGATGAATAATAAATCTCTGTTGAAGATGTGTTTCTTTTTAATTCTCTTGATATTGTTGATTTGTTTTTATTTAAGATTTTTGCAATCTTATTCATAGAATATTTTTCTTTATTTCAAAGAAAATAAATTAAGCATCTTTCTTCTTTTGTTAAATGTTTATAAGTTTTCATAAGCACTCCTAATATTCATTATCTTTTTATTAGTGAACACTTACAAACAAAACAAATGAAGTGCACACTCTTTTTTGAGTGTTGCACTTCACATGTCAATCGAGCAACGAAACAAATATAAATATTGATAATACAATT # Right flank : ATGCATCTAAAAAGTCATCATATTTAAAGTCTAGTTCTACTAATTGTTTTTTTGTTTTATCTGTATTGTTTGGTTCTAGACTTCTAACAACATTTATAATTTTTCTTCTTGTTTTTCTTTTAATATTTTTTAGTTATTAAAGAATTTTCATTTAGTATTTTGTTAATAGATGAAAAACTTATATCAAAGTTATCTTTGATATATTGGTTGTAAAACAATTTGTGAGACATTCTATAGTTTGTGTTATCTCTAGATGAATTAATTTTTCTTGAATGTTAATATATAGATCTACAATATTTTTTTATGTTTTTACAAATGGTTTTTTACTTACATTTTTTTATTTTAGTGTTGATAGATGAAATTTTTCTCTCCATAACTTTATATATGTCTATTACATTATTTTACTGATTTGTTACAAATTAACGAAAGTCTTTTAGCTGATAATTTCTTATTTTTTATAAGCTCTTCTATCTTTCCAAATATTCATAATTTAAAATTTT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.03, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTGTTTTGATACCATATCCATGTGAACTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 282512-286973 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033512.1 Mycoplasma iowae 695 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 282512 36 100.0 30 .................................... AACTGAACTGATATATTGTTGATATTGAGA 282578 36 100.0 30 .................................... GTTAATACATAAAACAGAAAGTAAAAAAGA 282644 36 100.0 30 .................................... TAACGGGAGTGAATTATTATAAATTCTTTA 282710 36 100.0 30 .................................... TGAAATTGATAAACTCATACCAATGATATT 282776 36 100.0 30 .................................... TATTACATAAATCATATAGAATATTCACCA 282842 36 100.0 30 .................................... GGTACATTTATTAACATGGAAACTCCAGTG 282908 36 100.0 30 .................................... TTCAATTTGTTCAGATGAGCATAATAATGA 282974 36 100.0 30 .................................... GATAAAAAATTACTTGCCAGCACATTTATT 283040 36 100.0 30 .................................... TCTGTTAATGATTATGAACAGAAAGACTCT 283106 36 100.0 30 .................................... AACTTAACAACTATATAATAACTTAACAAT 283172 36 100.0 30 .................................... ATAATGACGATTTAGATTTTTGCGAATTAA 283238 36 100.0 30 .................................... TAAAAATCAAAGTAGTAGAGATAAATACAA 283304 36 100.0 30 .................................... TCTAACATAAATCATTTCTTTAAACTCATC 283370 36 100.0 30 .................................... CTTAGCACGTGTGAATGTACCACAAGCAAA 283436 36 100.0 30 .................................... CAATGTTATAACAAAATTAATTTTTTTACT 283502 36 100.0 30 .................................... AATTAATAGGGTAATGCTTATGTATTTTGA 283568 36 100.0 30 .................................... TTGAATAGTTCATATGGTAAACATGCAACA 283634 36 100.0 30 .................................... ATAAGAAAGTTAGTCAAAGAGGAGGAATTA 283700 36 100.0 30 .................................... TTGTGAAATGACACCAGGCAAGATTATCGA 283766 36 100.0 30 .................................... AATAACTTAATAATGTAGCAATTACAACAT 283832 36 100.0 30 .................................... AAACATTAAAACAATAAACAAAATTAAAAG 283898 36 100.0 30 .................................... CAATGTAGTAATTACACACTCAACAATTAG 283964 36 100.0 30 .................................... TAGGGGCGTAAAATAAAATGTTATATATGA 284030 36 100.0 30 .................................... AGTATTTACAAGACGCTATAAAAGAAATAG 284096 36 100.0 30 .................................... ATTATTAGGTTTGTTATGATTAGGTTTATT 284162 36 100.0 30 .................................... TAATGGCTTTAAATTTTTCAAAATTTGGGG 284228 36 100.0 30 .................................... TTATACTGTAGCAGGTTAAAGCTTGCTATT 284294 36 100.0 30 .................................... TAAACTTATCGCGATAAGATGCACTTTTTT 284360 36 100.0 30 .................................... CAAAATGCATTTTTTCACTTTTTCAAAAAA 284426 36 100.0 30 .................................... ACACTTATTTTTTTTTGTTTTTTTTCTAAA 284492 36 100.0 30 .................................... CAATGAAGTAGAAAGAAAGATAAAGAAAAT 284558 36 100.0 30 .................................... TGGTGTATCTGTTTCTGCTTATGATGTTTC 284624 36 100.0 30 .................................... TGTTACCGCTACAAATACAAGTGAAGAACC 284690 36 100.0 30 .................................... TTTATACAACAAGAAAAGAGATAACAAGAA 284756 36 100.0 30 .................................... AATATCATTTTTATTTACCTCTTAAATTGT 284822 36 100.0 30 .................................... TTAAAAGCTTTATAGTACAATAAATATTTA 284888 36 100.0 30 .................................... GTGTACGCACGGTTACGTTCTATCAAAGTA 284954 36 100.0 30 .................................... TTTGCTGACTTTGAAACTGTAACTACTGAA 285020 36 100.0 30 .................................... TTGGTAGATCACACAAGAAAAATAACTTAT 285086 36 100.0 30 .................................... TTCATATTGAATGTATAGTCAGTAATTTCC 285152 36 100.0 30 .................................... TCAGAGAGGAAAAAACCAAATTTGGTGAAA 285218 36 100.0 30 .................................... TGCTCCTTGATCTAAATCTTGCATGCAAAA 285284 36 100.0 30 .................................... TTAATTCATTCTATAATTCTATTTTTCATC 285350 36 100.0 31 .................................... TTAACTTTGTTATTACGTTGTTATAGTAAAA 285417 36 100.0 30 .................................... AGGGGGAAAAACTGTCGCAAACTTTGGTGT 285483 36 100.0 30 .................................... AAATATGAATAATGAAATAATGAATTTATC 285549 36 100.0 32 .................................... AATTATTGTTAAAGGTTTCAATGCTTTGAAGT 285617 36 94.4 30 T..A................................ AACACGTTTATAAATAGCATTTTAAAGCAT 285683 36 100.0 30 .................................... ATATGAAAACAATTAATTTATCTGATTTTA 285749 36 100.0 30 .................................... TATATGTGTTAGATATTGCTTTTTGACCAG 285815 36 100.0 30 .................................... AATGAAAGGATTTAGGTAACATTACACCAT 285881 36 100.0 30 .................................... TAAAATGGCCTTTTTTACTTTTTCAAAAAA 285947 36 100.0 30 .................................... TGTAACACTTTTTTTAATATAATAAAAAAT 286013 36 100.0 30 .................................... TAAAGTCTCTATTAAGTATTTAGTTATTAA 286079 36 100.0 30 .................................... TACACTTAATTATGATAAAAAAAATACTAT 286145 36 100.0 30 .................................... TCTTTTCCCTTGAACACTATCTTAAACATT 286211 36 100.0 30 .................................... ATGAAATCACCTTTCACAATCAATTGATTT 286277 36 100.0 30 .................................... ATGGCGTTGAGAGAGTTAAAATCATTTAAA 286343 36 100.0 30 .................................... AATAATATGAATAATACACATAATATAATT 286409 36 100.0 31 .................................... TCTCTATTGTTGATGTTTGGATATAATTTAT 286476 36 100.0 30 .................................... GGAGTATTGAGAAATGGAAATCGAAAGTGC 286542 36 100.0 30 .................................... TGTCACTATCAGTAATATATGCTTTGTATT 286608 36 100.0 30 .................................... AACTATCTTGCATCTGTTCAAAGTCAACAA 286674 36 100.0 30 .................................... GGTCGTTGTTATCTATTATAAAAAATCTGC 286740 36 100.0 30 .................................... ATGCGCGCGCATTATGCGCGTACGCGTATT 286806 36 100.0 30 .................................... TGAGGATGAGGATGAAAAACCTAAGAAATC 286872 36 100.0 30 .................................... AATAACAATCATAGTAATTAATTACTACAT 286938 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 68 36 99.9 30 GTTTTAGTTCACATGGATATGGTATCAAAACAAAAC # Left flank : GAAAAACAAGGTTGGCAATTATTAGAAAAATAAAAGGGAAGAACGCTAGATCAATGATGGCTAAAATGTATACCATTATTCGAGATGAAAAACTCCCAATAAAAAGCATCACTGTTGATAATGGGTTAGAGTTTCAAATGATGGGAATAACTGCAAAACAATTCAACTTTAAAGTTTATTATTGCCAACCTTATTCTTCATTCCAAAGAGGGTCCAACGAGAACATAAATGGGATAGTTAGAAGATGATATAAAAAAGGAACTGACTTCAGTTTAGTAAGTGAAGATAAAATAAAAACTCTTGAATGAAAAGTAAACAACATCCCAAGAAAAATGTTTGGTTATAAAACAGCTTACCAAATGTATCAAGAAAATATTTAAAACAAAAAAACTCTCAACTTATATTTCAAAGTCGAGAGTTTAATGTAACATTGAAGTGTTGCACTTCACATGTCAGTTAGGGAACAAAACAATTGTATTATCAATATTTATATTTGTTTC # Right flank : CCTCAAAATCAACTATTATCTAATATATTTTATTAAGTAATTTATATAAAAATTGGATACACTTTCTTCATTTTTAAGATAATTTTCAATAACTTTATTGTTTATTAATGTATTCATTTTTAATTCAAGATAACTAATAAGTTTATTATAGTCATATATCTCAACTAAAAAATCATTACAAATTACACATGATTCAATTTGAGTTATGTTAACAATATTTTTTCTTAAATCATTTGTAACAAAAATAAAATTGTGACTATTAATGTATTCTGAAATATCATTAATATTAAGTCAATCAATGTCACAAAAAACAAACGTCATTCTTTCATCAAATAAATTATTTTTTATCAAAGAAATAAAAATATTTTTATTAATATTGATCAAATCATTTATTTCAAACAAATTTGAAATAATTTTTTGCATTTCATTTTTTTCTTCGATAACATCAAAACCTATTTTGCTATTTATATATTCTTTTATGTTGTGTATTTTATCATTAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTCACATGGATATGGTATCAAAACAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //