Array 1 11205-10478 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUAQ01000046.1 Bacillus pseudomycoides strain FSL H8-0534 NODE_46_length_25176_cov_49.616, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 11204 28 96.4 37 ...............A............ GTTTTTCCAAATCAATTAAATAGTTCATTTCCACACC 11139 28 100.0 39 ............................ GTGTTGAAATCGCGCTGCTGCTGTTACAACCTCATCTAC 11072 28 100.0 37 ............................ GGTATCCTGTTGCGGACTTTCTATAGTACTTGTAGTT 11007 28 92.9 37 .............C.A............ CGTGTATAAACCATTACTATCCAAATATGAAATTTTT 10942 28 92.9 37 .......T........A........... GTGAATCGTTGTATCGGTAAAAGCAATCAGTGTATTT 10877 28 96.4 36 .........A.................. GATTCCTGTTTCTTTAAACGAGCTTGACCCAGTCGG 10813 27 89.3 36 T........T.....-............ CGCCCATACATATGGATAACCATCGTAAGGTGATAC G [10800] 10749 28 85.7 19 .........A.C.G.A............ CTTTGCCACGTTTATCACC T [10743] Deletion [10703] 10701 28 92.9 38 .........A.............T.... TTACGGTAAAGTTAAATTAGAAGGAAATGCACCATTTT 10635 28 92.9 37 ..............G.A........... ATAACCTTTACCTACAATAACTGCTGCTTTGTTAAGT 10570 28 85.7 37 .C.......A......A......G.... AATCGGAGCATATTTTGGACCAATTGTTTCAAGAGTA 10505 28 89.3 0 .....C...........C.....T.... | ========== ====== ====== ====== ============================ ======================================= ================== 12 28 92.9 36 GTTTTATCTGAACTATGTGGGATATAAA # Left flank : AGAAAACGTAAAATTTTTGCTTTTCTTATTCGGTTTATTCTCAAAGACATATAGGTTCTCTGCATATACTGTGTTTGATGCTTTTAGAGCTTCTTTGATAAAACTCACAAACATAAAACGATACGAGAGAGGAATTACTTTGCAAGTAAAGCTTACTTTCAATTTCATCATCTTCCTCCTTGATCTTCAATATAAAACTATTATAATTTATTTGAAAATTAGGATTCAATAAATATGTAGAAATAAATGGAAAAACTTTTCTTTTCAAAGAAAGGTTTTTTCTTGATCTCATATAGTAAAGATAAAAACTATGCGGTACTTCTATAATTTTGCAGTGAGCCTCGTTTTTGCCAAGCATGCAGAAAACCTTGCTATGACAAGGTCTTTCAGCATGTTGTAAGAGAATACAAAAACATGATCGATGATTCGCTGCAAAATGTTGGTTGCTACAAGTAGTAAAATGTTGCTATCATTAGGTATATCATCTGTATATAGATAGG # Right flank : GCAACAAAAGTATAACCAAAAGGAACATGTAGCAATCACTACAAGTTCCTTTTAAGATAATGTTAATAAGACAAACTATTCTTTTATTTTTTCCTCATATTGTTTAGCAAGCTTATAAAACGAAGAACGTTTGATGCCATACTTTTTCATGGCCCCTACTGCTGTAATTGAACCGGATTTCCATTCTTTATAAGCTTTAATAAATTCTTCTGTTATTTCGACAGGAGGACGTCCTAAATGTTTCCCTCGTTTTCTGGCAAGAGCAATCCCTTCAGCTTGACGTTGTTTAATATCGATGCGCTCTTTTTCTGCAAAGGCAGATAATATTGTCAGTGTTGCTTTTTGAATTGCGCTCTGAATAACATCATTTGTACTTTCTCCAGTGTAATTGACGTTAATGTATGGTTCCTTTATAAATTGTAAATTTACTTTATGTTTTTCGTAATATCTAAATTCTTCTAATGTATCATTCATATTTCTTCCAAGTCTTGTCAAGGAGT # Questionable array : NO Score: 5.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:-0.08, 8:1, 9:0.29, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATCTGAACTATGTGGGATATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 17941-18874 **** Predicted by CRISPRDetect 2.4 *** >NZ_MUAQ01000046.1 Bacillus pseudomycoides strain FSL H8-0534 NODE_46_length_25176_cov_49.616, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= ========================================== ================== 17941 25 88.0 39 ......CC....T............ TACTTAAGATCAAAGTTTCCTGTAATACTTTATATCGTT 18005 25 88.0 42 ......CC....T............ TCAATCAGGATGATGAACCTTTGTAAGTCTCTTGTACTCGTT 18072 25 84.0 40 ......CC....T.....G...... GTTCTCCAATCCTGGATTCATCAAGTTCCTCACTGTAGTA 18137 25 100.0 40 ......................... GATGCAAAAGATGGGTAATTGTTGCTTATACAATATAGTT 18202 25 88.0 39 .....A......TA........... GATCGCTGATACTTTCGGTATGAACTTAGAAGAAACGTT 18266 25 88.0 40 ....T.......T.C.......... GGTTCCTAATACACATAAAATAGTTACAGAGAAAATAGTT 18331 25 92.0 41 .......C....T............ TTCTTGTGTAGCACTTTGCATATCTGTTAAACGTAAAGGTT 18396 25 96.0 39 ............T............ TGCATTAAACATTTTGTTGTTTCCAATATAGATTCCGTT T [18402] 18461 25 88.0 40 .......C....TA........... TGACATATCTATGCTTATAAAGATTAGCGATCTTTACGTT 18526 25 100.0 40 ......................... GTTTCCTGTCTGTCCTGTGATAGCAATATGCGGACTAGTA 18591 25 100.0 40 ......................... GGCATAAGTGCTGTATGGAATGTTTAATTCTTCCGAAGTA 18656 25 96.0 39 ............T............ GGCACCGGACATAAACTGGCTCATCCCCTGCAATTTGTT 18720 25 92.0 39 ............T.C.......... GGTCGATAACCCGGCACCCGGAGATTTAGTATTTTTGCT 18784 25 88.0 41 ......A.....TT........... ATATGCAATAGAATTAGGCAATGAATTCACAAAACGTGGTT 18850 25 84.0 0 ..........CG.A......G.... | ========== ====== ====== ====== ========================= ========================================== ================== 15 25 91.5 40 TTATCTGAACTAAGTGGGATATAAA # Left flank : CTTCCACTAAACGATATGAGAAATACAGAAGCACAAAAGTTGTTGCGTGATATTGATAATTATCAAGTTATTCCCTGTTCTATATATGTAGAGAATCGTGAGTTATTTAATACATTTAAACTGGAAAAAGATTCGAAACAGCGAAAAGTATTACGAATGCAAATCGAAAAGCTTACAACCTCTATTTCTAGACAACAGGTTCAACGATACGGAATCGAAACAAAGGAAATTGATATTACTGGACTTCAATACATTCACACTTTAAATTGTGAGTACGATTTTGATAAAGAAAGGATTACAGGAACAGGAATTGTACTTCCGTAATTTTGCAGTGAATCTCGTTTTTTCCAAACATGCTGAAAACCTTGATATGACAACGTCTATCAGCATGTTTGAAGAGAATACAAAAACACAATCAATGGTTCATTGCAAAATACTGATTGATACCCATGGCAAAATGTTGCTATGATAAGGTGTATCATCCGTATATAGATAGGGTT # Right flank : ATTATACACCTGGTACACATGAAGTTTGCAAACCGAAGCTAAGTTTTACAAAACATACAAAATGTTAAACTCATAAAACCAGTGATATGCGTACTCATATCACTGGTTTTTTATATAGACTTTTCGTATGCAGTTTTACAAATTATAAAATGAGATCAACTTATTTTACTTTTTGTAAATGAAATGTCCCAAAAAGTAAAGTTTCTGAAATATTTTTATTTACCAACATTATAGGTTCTAGGTGTTCCTGATGTTGATTTGAAATAAAGTCGCGATGTTTATAAAAAAGATGCGATGTTTTGAATAATGTCGCGACGTTTGGAAAAATTTGAACACTAGAACATTTAGTTTTTATATTAAATGGTATAATTTACTTAATCATTTAAAAATCACTTAAATTTTTAAAATCAAAGTTATACATATTGAGTTTGGGATTTTATTTTGAATCTATCAAAAAGAAAGAGGGATTAGATGCATATTAGTAATTTCATTAGAAATTT # Questionable array : NO Score: 5.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.57, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTATCTGAACTAAGTGGGATATAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [7-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //