Array 1 77433-81809 **** Predicted by CRISPRDetect 2.4 *** >NZ_PPUE01000008.1 Eggerthella lenta strain CC8/6 D5 4 NODE_8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 77433 33 100.0 33 ................................. CTCATCATGCCGTACTATAATCAGCTGTACCTG 77499 33 100.0 35 ................................. GCAAGTACACGTGCAGAGCCGAGATAGCGCGCCAG 77567 33 100.0 35 ................................. CGGAAAGTCGGATTCGAGCGGAACCTACGACAACA 77635 33 100.0 33 ................................. CCCCAGAACATGCAGGTTACGTCGTAATCACGC 77701 33 100.0 34 ................................. TGGGCTAAAACGTTCGATTTCAACGCGCAACTTG 77768 33 100.0 33 ................................. AAGCAAGGCATATGGCAACTATTTGAATGGCAC 77834 33 100.0 33 ................................. CTGCGCCCGAAGACCTATATCGAGGACGAGGGC 77900 33 100.0 33 ................................. CCTATTGTGGCTTGCGTGGGCATGTTTTACCTG 77966 33 100.0 33 ................................. ATCTACGGCATTCGAGGTGCTGGCAAGACCTAC 78032 33 100.0 34 ................................. AGGACGGTTGACCCGTCGAACACGAGGGCGCTAA 78099 33 100.0 34 ................................. CTGAACGACTACGGGCTGCAAGACCTCGTGGGGC 78166 33 100.0 33 ................................. CCCTTTATTACAGGTACATAAACACCGACCGCG 78232 33 100.0 33 ................................. TACTCCGAAACGGAGTACATCCATGACACGGAG 78298 33 100.0 33 ................................. CGACACCTGCGCCTGAGTGTTTCCGATGGTAAG 78364 33 100.0 33 ................................. ACGATCAGCCCGCCGTCTATCCGATGGCGCAGC 78430 33 100.0 33 ................................. CAGATGTCGCCGTTCATGGGCGCTTCAAGATCG 78496 33 100.0 33 ................................. CTCATAGTATGCGGGGCGCTGATGCGCGCCCCG 78562 33 100.0 33 ................................. CTCATTGGTGATCTCAATTCCAACCGGCACGAA 78628 33 100.0 34 ................................. TCCAGTATACAGAGCGTTGCGCAAGTTGTCCTGG 78695 33 100.0 33 ................................. CCGTGCTGCGCCCGCCCAATTCCATGAAAAGGC 78761 33 100.0 34 ................................. CAAAACCGAGAGGATGCTCATATCCGACGGCCGC 78828 33 100.0 33 ................................. AGGCCCTTAAAGCCCGCAATTACGACCTGTTGA 78894 33 100.0 34 ................................. ACCTTGTAAAAGCCGTCGATGCGCGCGTACTCGG 78961 33 100.0 35 ................................. TCATATTCATAGATGTTCTCTGGCAGTCCAGGGAG 79029 33 100.0 33 ................................. CACATAGTCACGCCATAATCATCGCGCGAGAGC 79095 33 100.0 33 ................................. TACTTAGTGTGTTATATGCGCCGCAAATACTAT 79161 33 100.0 34 ................................. GGATACGCTCTCATGCATGCATACCCTGTGGCCG 79228 33 100.0 35 ................................. TTGTTGTCGCCGTTCCTCGCGGCAGCCACCTCGGC 79296 33 97.0 33 ........................A........ CGATGCCGACCACGACGATAGCGCCCATGATGG 79362 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 79427 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 79494 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 79564 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 79630 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 79696 33 100.0 32 ................................. GAGTTCGTTACCGACACGATCGGCCTCATCGG 79761 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 79828 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 79895 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 79963 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 80030 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 80097 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 80164 33 100.0 36 ................................. ACGTATACGGGCTTCGCGCCGGTGCCGTTGACGTCC 80233 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 80299 33 100.0 33 ................................. GATCCGCTACGACAACGTAGGGGATCAGGCCGA 80365 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 80434 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 80501 33 100.0 33 ................................. GGAGAAACATATAAAAAGGACGGTGTAATCTCG 80567 33 100.0 35 ................................. CAGTTGATGTCTTTTCGCAGGTCGATGGCGCACGC 80635 33 100.0 34 ................................. AAGCCGACGAATACGCCGGCGAACGCCATTCAGC 80702 33 100.0 34 ................................. AGGCCCTGTCGGCCCGGTCGGCCCTGTCGGCCCC 80769 33 100.0 34 ................................. ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 80836 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 80902 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 80967 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 81033 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 81099 33 100.0 33 ................................. TGGCAGCCTCTCGCAGGGTCTCGGCTGGCTCAA 81165 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 81235 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 81304 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 81370 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 81436 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 81507 33 97.0 33 ..T.............................. CTACGATGCCATGGCGTCCTATGCATTCACGGG 81573 33 97.0 34 ......T.......................... GAGGAATATACGCGATTCGTTGAAACGGATGTAG 81640 33 90.9 36 A.....T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 81709 32 93.9 34 ..............-.................C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 81775 33 75.8 0 .....GTT.A..T.....C.C..........G. | T,C [81779,81791] ========== ====== ====== ====== ================================= ====================================== ================== 66 33 99.2 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : GCGCGGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCAGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTATTGGCGCTATATGTTGATCGAGGCAGTAAATTTTGCGCATAATATTGCG # Right flank : TCGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCACTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //