Array 1 59879-58813 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMNQ010000021.1 Enterobacter cloacae isolate MGYG-HGUT-02502, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 59878 29 100.0 32 ............................. AAGATATCTCGTTTTGCTCATAGCGTAGGTGG 59817 29 100.0 32 ............................. GGTGGCTGGGAGACTGCAAGCGACGAAGATAT 59756 29 100.0 32 ............................. ATCTGCGCGCTGCCGGTGGCGACACGCGTCAC 59695 29 100.0 32 ............................. TCAGGCTTTAACATTTATATAGTTTCCCTATT 59634 29 96.6 32 ............C................ TTCCCTCCTCGTTTTCCTGTTTTTTACAACAA 59573 29 96.6 32 ............C................ GGATTACCTGTGCCGCAATCCAGCCCTGGTGG 59512 29 100.0 32 ............................. TTGTTTTAATGGAGGCGAATCCCGATAACTGG 59451 29 100.0 32 ............................. TCTCCGCGCCTCCATGCGCTTACAGCGCATCT 59390 29 100.0 32 ............................. TGCCAGCGGTTCATTGTCAGCTTGTCGCGCGG 59329 29 100.0 32 ............................. TGAGTTGTTTGGCATATAAAGACCCTATCATT 59268 29 100.0 32 ............................. GATTTACTCATTTCAATTATTGAAATGGTAGG 59207 29 100.0 32 ............................. AGAAACCGTATATCGCAGCCGCGGCCGCTGGA 59146 29 96.6 32 ............C................ AGACTACCCCTGAAGTGCTGAATTTCATCAAG 59085 29 96.6 32 ............C................ CGTGTGCCGTCCAGCTGGCGCCAGCTGGTCAA 59024 29 93.1 32 ...........AC................ TCAGCAAATCGTTCGTTGCAGCGCTTCTGCGC 58963 29 96.6 32 ............C................ TTCCCTCCTCGTTTTCCTGTTTTTTACAACAA 58902 29 96.6 32 ............C................ GTGAGGAGTTCAGATTGTGTTCGAATTTAAGT 58841 29 75.9 0 A........A.A.C........A.GC... | ========== ====== ====== ====== ============================= ================================ ================== 18 29 97.1 32 GTGTTCCCCGCGTGAGCGGGGATAAACCG # Left flank : GGTTCTTGCTGCCGGAGAGATTGCGCCGCCGCAGCCCGCAGCGGACATGCTTCCGCCTGCCATTCCGGAGCCGCAGGCGCTCGGAGATGAGGGGCATCGGGGAGGTGGAGGATGAGCATGGTCGTGGTGGTTACCGAGAATGTACCGCCTCGTTTGCGTGGCAGGCTGGCCATTTGGCTACTGGAGATCCGCGCAGGGGTATATGTCGGTGATGTTTCGAAACGGATACGTGAAATGATCTGGCAGCAAGTGACGCTACTGGGTGGTGAAGGCAATGTCGCAATGGCCTGGGCCACGAATACCGAATCTGGTTTTGAGTTCCAGACCTGGGGGGAAAACCGTCGTATTCCGGTAGATTTGGATGGTCTTCGATTAGTGTCTTTCTTTCCTGTTACTATTCAATAGGTTACCTGCTCTTTAACATTGTATATTTGTGATCGATATGTTGGTAGGATGTTTTTTCTGTGTAAGTTGTTGATTTATAAGATTGTATATTTAGT # Right flank : CTATTTCCCCGCTTTTGCCAGCTCCTTCACCAGCGGCAGCATCACCTTCACCACATCACGGCTGCGGTGCTCAATTCGCTGCGGCAGTGCGCTGTCGATGTGCTGCTGATTATCCAGCATCACGTTGTGCCAGCTTGTCCCGTCCGGGAAGGCCTTCGTTTTCGCCCGCTGCTGGTAGCCATCTTTATTGCCCAGCGCCCAGTTTGTCGCTTCCACGTACAGCACCGGAATGCCCGCCTTATCGAACACTTCGCCGTCGTTGCAGCAGCCGGTGCCTCGCGGATAATCCGGGTTCCCGCCGGGATTACTGGTGGCATAAACGCCATGGCTGCGGGCAATGGCCAGCGCCCGGTCGCGCGTCAGTTTTCGCACGGTACCCGGCGTACTCTGCCCGCTGTTGAAATAGAGCTTGTCGCCGACGATCAGGTTATCGAGGTTGATCACCAGCAGCGTATTTTTCTTCTCCTCTGCGCTCATGCGCTTAAGGAGATTCTCAGCGC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.94, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGCGAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 127571-127002 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMNQ010000028.1 Enterobacter cloacae isolate MGYG-HGUT-02502, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 127570 28 100.0 32 ............................ AGGCACTTCAGCCGCTACTGGATGACGGACGG 127510 28 100.0 32 ............................ ACGCAGCCAGTGGCGGCGGCCTACGATATCGA 127450 28 100.0 32 ............................ TCCCCGCGCGGCCTCGACGTACACCGCAGCAT 127390 28 100.0 32 ............................ TTTGAGCTGTATGTCAGCCTCCGTATCAAAGA 127330 28 96.4 32 ......C..................... TCACGGTCGCGAGCTTTCGGAGACCTGTTATT 127270 28 100.0 32 ............................ CTTTAAATCCATCGTCGCATAGACGGGAGGGA 127210 28 100.0 32 ............................ GGTCGTGTCGATGCATCCACCGTTCGGGCCAG 127150 28 96.4 32 .............C.............. AGAGAGGCTTGAACATCCTGCTGGTGGCTGCT 127090 28 92.9 32 .............G......T....... GCCCAATGAGCAACATCGACAAACGCGCTTTT 127030 28 96.4 0 .............C.............. | C [127005] ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.2 32 GTGCACTGCCGTATAGGCAGCTTAGAAA # Left flank : ACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGAATGTTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAACTCAATCAGCCGCATCCCCCTGTTTGCAGGTAAACCGGCGTAGCGCCAAAGCGCGTTATCAGCAGGTTGCTGGGCGGGGATCCATGTTCTCATGTTACCTCCGGATTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCAGGTAGAGTGGAATGGCGTTTTTTTATACTGGGTGGTTTGAGAGAAGAAGGGGGTTTGACCCTAATTTTTAGAGTGTTTGTAATGCATTGATATTAAATGGATATTTTGAGAGGGTAAAAAAGAGGGTAAAAGAAGGGATTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGAGATATTATTTCA # Right flank : ATAGAAAATAAGGTCTCTCCCCCTTACTTTCTAAACTGTCGAACAGACAGCCTGAAACGAACCGCCAATTAATTGTTCAAATAATCAACTGCACCACAAAAAAATAAGACCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 137537-137267 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMNQ010000028.1 Enterobacter cloacae isolate MGYG-HGUT-02502, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 137536 28 100.0 32 ............................ AGTCCCGCTGAGGGTTTTGCATAATCTGGTAA 137476 28 100.0 33 ............................ GGTGCCGTTAATCGCGCAGCAGAAGCAATGCAT 137415 28 100.0 33 ............................ CTAGTATAGTATGATGAGATGAAATTACCCTAT 137354 28 100.0 32 ............................ CGCGTGAGGGGCTTTTTTTAAAGGGCAACATT 137294 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 5 28 100.0 33 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACATTACGCATTCTATGGCCGCAGACGTTGTTGCGCCTCGAAATGCAGAACCGGTAATTCACATTATTTCCTGAGTTCGGGCCCAGGCGTCGGGGGCATTTCTCTGACGCCGTTGGCGTGACCCTTTTTTTTGATGTATACGTAACGTATTGATTTGTTTGGTGCGGATTTACGTGCCAGAAAAAAGGGTTTTATGCGTATAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTGGTTTCTTTCCAGTTCACTGCCGTACAGGCAGCTTAGAAATGAAAGAACAGAACGAATCGACCGGCGAACTGGTTCACTGCCGTACAGGCAGCTTAGAAAATTAAAGCAGTGCTTGTTGATATAGATAAAGGGTTCACTGCCGTACAGGCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTACAGGCAGCTTAGAAATCGTCAGTATCGTCAGGCGCTTCCGAGGGCTT # Right flank : CGGCGCGGTGCCAGGGTCTCAAAACGAGAGATGTTCACTGCCGTACAGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTACAGGCAGCTTAGAAAACGCGCGGCACTCCGACGTTCACTGCCCCACACCATCCTTCTCAAACCAACCCACTTTAAAATATTCACCAACCCAATTTAATACCTCATCCTATCAAACCCGCACTCTCTATTTTTCATAAAAAATAAAAAACTCATTCACAAACAAATTATATTCTAACGAATATATTATTCGCAAAAATAATACTTCAGCTAAGAACCTGATTTTTCATCGTATTCTCATGGTGATTATTATTCATTTGATACCCGTCACATTTGTTTTTATCCGTTATTCGCTAACATACTTCGCATTCAACACCCTGAAATAAAAGCCCTTGCCATGCCCGTAAACAGC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [33.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 153489-153041 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABMNQ010000028.1 Enterobacter cloacae isolate MGYG-HGUT-02502, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 153488 28 100.0 32 ............................ AGAAGAGTGGTAGGCACTGCGCCTGATGCTGG 153428 28 96.4 32 .....G...................... ATCGACTCACGGCGGCCGCCCACGGCCAGCAC 153368 28 100.0 32 ............................ CGCCAATCGACGCCGCCCAGCGCAATTCTATT 153308 28 100.0 32 ............................ TTAACTACTCTATACCCAAATGGGAAGGTGTG 153248 28 100.0 32 ............................ GTGTACGCGTCGTACAAGTCGCCAAGAAAAGA 153188 28 100.0 32 ............................ AACGCAAATAAATGTCACCACACTGGATAATG 153128 28 96.4 32 ...........C................ TTGCCGGGTGATTTAGCTGTCTTGCCGTCGTT 153068 28 82.1 0 .....................AACC.C. | ========== ====== ====== ====== ============================ ================================ ================== 8 28 96.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTTTGCACAAGCTTTTTGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGATTGCCTGGATTTATCGCCTACGGCGTGTTGATTGGCGAAGTGCTGGCGCCAGTCCTGATTATTATCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATTGTGGCGTGGCTGATGGTGGGAATGGGTGAAACGTTCGCCCTCGATAAGGTTGGTGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTGTTGGCTCGCTGGCGGTGGCGTGTTTAGGGGCAGGGCGTTACGCGGTGGGGAAAGACCCAGCGTGGCGTTGAGGTTTGGGCTCGGGTATGAAGGAAGGGGTCTGAGGACCCTTTTTTATTGGCGATTTGTAACTCATTGATTTTATTGTGCTGAAATGTATGCAAAGAAAAAAGGGGTTGAGACGATTTTTTTAGGTAATTTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : TCTAGTTCGGTCAAACACTGTGCTGCCTGTTTATAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGAAGAGCCTGCATGTAAAAAGTAGGCCGGGTAAACGCAGTGCCACCCGACAAAAAGCCTGAGTGGAAAAAGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAGCCTGAATGGATAAGGTAGGTCGGGTAAACGCAGTGCCATCCGACAAAAAGCCTGAATGGATAAGGTAGGCCGGGTAAACGCAGTGCCACCCGACAAAAAACGGCGGCACCGCGTCAGATTATGCGAGAACTAAATCCCCCTGCGGGTGGCACGAGCACGCCAGCACGTAGCCCTCGGCAACTTCCGCGTCGGAGAGCGTCATGGTGCTGGTGACGGTATACTCCCCAGAAACCACCTTCGTCTTACAGCAGCCGCACACGCCCGCGCGGCAGGCTGCCACGACAGGCACCCTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTCCCCA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //