Array 1 66642-61873 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSWX01000012.1 Lampropedia aestuarii strain YIM MLB12 Scaffold12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 66641 28 100.0 32 ............................ AGTGATGGTCTTGGCTGATGCAGCTGCTTGCT 66581 28 100.0 32 ............................ AGTGATGGTCTTGGCTGATGCAGCTGCTTGCT 66521 28 100.0 32 ............................ ACACTCCAAGCCCGGCAGCCGAGAGTATTAAT 66461 28 100.0 32 ............................ TAGAGACAATTATCAAATTGAGACGTTAGCAG 66401 28 100.0 32 ............................ AAGAGAAGCAAGCACGGCTAGTGCAGACGAGA 66341 28 100.0 32 ............................ ATCCAAGGTGGGGCGTTGAAACTTGATCGTGT 66281 28 100.0 32 ............................ ATAGGTTTTCCGTAGGGCTTCGGCGTTTTGTG 66221 28 100.0 32 ............................ TAATAGAGCATTTGTAGGCAGCATCCACTACA 66161 28 100.0 32 ............................ AGCGTCACCATTGGCGCTTTTTTTACGCCTGA 66101 28 100.0 32 ............................ CAGGTGGCGAACATAGCCGCTACGACGACGGG 66041 28 100.0 32 ............................ GGCACCCCCAATAGCTTTCCACGCCGCACCAC 65981 28 100.0 32 ............................ GACCCGCCACGGATTCTGGCCAACACCAGCAC 65921 28 100.0 32 ............................ CAGGTGGCGAACATAGCCGCTACGACGACGGG 65861 28 100.0 32 ............................ GGCACCCCCAATAGCTTTCCACGCCGCACCAC 65801 28 100.0 32 ............................ GACCCGCCACGGATTCTGGCCAACACCAGCAC 65741 28 100.0 32 ............................ ACCAAATGCAAGGTGGGATGTGGATTACTGGC 65681 28 100.0 32 ............................ ATACGCTTGTGAGCTGCTGCGTAGCTGCTATA 65621 28 100.0 32 ............................ TGACGCGATGTGTATTGGTAACGGTGGTACTT 65561 28 100.0 32 ............................ AATAAGAAAAATCACTAGACTCTGGAACTGTA 65501 28 100.0 33 ............................ CTCGGAGCCATGGGGCCTGAAATTGTCGGCATG 65440 28 100.0 32 ............................ AGGGTGAGGGTCACCATCACCATCACCATCGC 65380 28 100.0 32 ............................ AAGAACTATGATGATGACGTATAAACCAAAAC 65320 28 100.0 32 ............................ TTGGCGTTGCTACTTATACCGGCCTGACTGTA 65260 28 100.0 32 ............................ ATGAAGTCGCTCACTAAAGCTGAGTTGAAGTT 65200 28 100.0 32 ............................ TGAAGACAAGAGCAAAGCTAGCCGATATAGCG 65140 28 100.0 32 ............................ ATGCCAAATGCATATGCCGCAAGAAGGCTTTC 65080 28 100.0 32 ............................ ACCAAATGCAAGGTGGGATGTGGATTACTGGC 65020 28 100.0 32 ............................ TTGAAGCCTTGCGACTCGCGCATGATCTTCTC 64960 28 100.0 32 ............................ GACCCGCCACGGATTCTGGCCAACACCAGCAC 64900 28 100.0 32 ............................ ACCAAATGCAAGGTGGGATGTGGATTACTGGC 64840 28 100.0 32 ............................ AGATAGCCAAAGGCGCTAACGGTCAGCCATGT 64780 28 100.0 32 ............................ ATACGCTTGTGAGCTGCTGCGTAGCTGCTATA 64720 28 100.0 32 ............................ TCAAGGGCGCTGTGGGTTAGAAAGGGATGCTT 64660 28 100.0 32 ............................ CGCGGTCATGCACACCGGGAAATACCAGATAC 64600 28 100.0 32 ............................ AATAAGAAAAATCACTAGACTCTGGAACTGTA 64540 28 100.0 32 ............................ TGACGCGATGTGTATTGGTAACGGTGGTACTT 64480 28 100.0 32 ............................ AATAAGAAAAATCACTAGACTCTGGAACTGTT 64420 28 100.0 32 ............................ CGCGGTCATGCACACCGGGAAATACCAGATAC 64360 28 100.0 32 ............................ AATAAGAAAAATCACTAGACTCTGGAACTGTA 64300 28 100.0 32 ............................ CGCCTGGATACGTCAAGCAAGGCAATTTGTGT 64240 28 100.0 32 ............................ ACTGCCGGTGCGCCACTGTGCAAAAGTAGGCA 64180 28 100.0 33 ............................ CTCGGAGCCATGGGGCCTGAAATTGTCGGCATG 64119 28 100.0 32 ............................ TCACATCAAAGAGCTCGCTGAGCATCGCAGGC 64059 28 100.0 32 ............................ AAGCGTGCAGTGTTGTCAGCGTGTCCTGGCAG 63999 28 100.0 32 ............................ TCACATCAAAGAGCTCGCTGAGCATCGCAGGC 63939 28 100.0 33 ............................ TTGCTGGATATGGGATGCAGGCAAAGCCATTGT 63878 28 100.0 32 ............................ TAGGAGGCTATATGGCTGAACACCAATACTCT 63818 28 100.0 31 ............................ CAATTCCCCACGTACTGCCGAGAGTCCTGGC 63759 28 100.0 32 ............................ GCTGGCCAGAAGGGTGTACGCGCATCGTAGAG 63699 28 100.0 32 ............................ GCAGCACATCAACGACACCGCTACCGGGTAGC 63639 28 100.0 32 ............................ GCTGGCCAGAAGGGTGTACGCGCATCGTAGAG 63579 28 100.0 32 ............................ TGGTGGAATATTTCCCGCTCCGCAGCTTCCCG 63519 28 100.0 32 ............................ CACTTCAGTGCGCGGAATGCTTCAGCCTCGAC 63459 28 100.0 32 ............................ CCGTCACCCCGCCAGCGCCAATGGCCTCTTGC 63399 28 100.0 32 ............................ GGCATGGCCCCCGTGATGGCTTCAGGTTTAAA 63339 28 100.0 32 ............................ AGAGACTCGTAAGTTGATCAAAAGCTTTATTC 63279 28 100.0 32 ............................ TGATGTGACTTATGCCTGGTCTGAATCCTATG 63219 28 100.0 32 ............................ TCCACAAAACCAGAGCCACCGTTAAAGCCATT 63159 28 100.0 32 ............................ ATCCCTCGCGAGTCATGAGCGCATAGCCAACA 63099 28 100.0 32 ............................ TGGGGGATGCATCGGGCACTGTGGACTACCAA 63039 28 100.0 32 ............................ TCAGCCGCTGGGGCGTAGGTGATTTGCAATGT 62979 28 100.0 32 ............................ TGAGACAGACGCAAGTGCAATCGCTTTTATGC 62919 28 100.0 32 ............................ TTGGGGCAGGGTGGATTTTGTGGGGTTAATTC 62859 28 100.0 32 ............................ TTGGCAGTTCAGTGGCTCAAAAGGTGGTCAGT 62799 28 100.0 32 ............................ TGAGAAATTCAAGAACATTGGCGCGGAAATGA 62739 28 100.0 32 ............................ GCAATGTCTGAACTCATTGCGCAGTCGGGCAG 62679 28 100.0 32 ............................ TTACCCAACATCAAAGCGTAACTGTGAAACTT 62619 28 100.0 32 ............................ GTTACCAATACACATAGCATCAGGTCGCCGAT 62559 28 100.0 32 ............................ TTTTTGAATTGAGAGGGAGGTCTGGTACATGG 62499 28 100.0 32 ............................ CTCCTGCGCAATGGCTGCGCGGTGTGGCGAAT 62439 28 100.0 32 ............................ TCCGGCACTCCCTGGGGCGCACTGGCTCGGGC 62379 28 100.0 32 ............................ AGAAGATTGGCGCGCGCCCACAAGCTGGGAAA 62319 28 100.0 32 ............................ ATTTACCAGGCGATGACCAAGGGCGTGGCCGA 62259 28 100.0 32 ............................ GTCAGGTGCTGGTGGATGCCAATGAGCGCAAG 62199 28 100.0 32 ............................ AACAAAATGCCGCCTTCTTCTGTATAAAGCGC 62139 28 100.0 32 ............................ GACAAGCAGCAGCGCGGGCGAGTGGAAGCGAC 62079 28 100.0 32 ............................ AGCACCTCGGCGGCATTTGGGTCATCTGGATC 62019 28 100.0 32 ............................ ATCACCACTTCTGGGTTTATCTTGGATGGCAT 61959 28 96.4 32 ......................A..... GTCTCCGCTTGTATTGGTACGTCTAGCCACGG 61899 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================= ================== 80 28 99.9 32 GTGACCTGCCGCATAGGCAGCTCAGAAA # Left flank : ATCACTGCAAGCCTTGCTGGCCAGCGATTGGCTGCGGGGTATGCGTGATCACACACAGCTAAGCCCCGTAGCGGCAGTGCCGGCAGATGCAGAACATCGGCACTTCACACGCCGGCAGTTCAAAACCAATGCTGAGCGCCTGCGCCGCAGGCGCATCAAACGCAAAGGTGAAACACCAGAACAGGCAGCCCTCGCCATTCCCGATAGCGTAGAACGCCAGCCTAACCTGCCTTTTGTACACCTGCGCAGCAGCAGCACCGGCCAGCCATTTCAGCTGTTTCTGGCGTTGAGCGAGCCTGTGTCGTCGACAGTACAGGGCAGCTTTAATGCTTACGGACTGAGCACCAGCGCGACGATTCCGTGGTTTTGACCCTTTTTCCTGATGTACGCCAAGTACCTAGGAAAATCAATCACTTAGCAAACACCCGAGAATTTGGGTGTTTTGCTTTGTTATAGGGATTGTTCTTTAAAAATCAGAGGATTAGAGGATTTAGAATCTA # Right flank : TCACCAAAACAACGCACTGGCCAGCTTGCTGGATAGCCTCATCAGGCCATATCGAGCATATTGCGTGACGCATGCAGAAACTCCAGTGCTTCTTGCGGAGTTTTCTGCAGCAGGGCCTCAATGAAGGGCATGCCCTCCAACAAGCAGTAGGCCATGACCCAACCTTCGTATACGCGCGGCCCTGTCAGTGGGGCATCCAGCAAGGGCGTGAATGCGGTGTGGCGTGGGTCTTTTTGGATGCTGGCGATGAGGTGGCGCACCGCAGTTTCTGGCCCTTCAAAATACTGGCAAAAGCGTGTGCCATCGAAAACAAGCACCCCTGTTATGCCATGTGTCGCGTTGAATAGGCGCGCTGTCTTGATGATGTCACTGACACATACAGCACCGTAACTATCGGCGAGTTGGCTGTGGTAGAAAAAGCGGTGCAGAGTTTGGGTCACGTAGGCTTTCGATTGATCTTACGTAGTGCAAGCCAGGCGGCGCCTGGTTTCTAGCTTGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //