Array 1 2126193-2128185 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018002.1 Propionibacterium freudenreichii strain P.UF1 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2126193 36 100.0 37 .................................... TCAGAAACAGGCATACCAGATGTTAATGCAAGGGCTG 2126266 36 100.0 36 .................................... GACAGGACCACAGGCACGGTCCTGGACCACAAGATC 2126338 36 100.0 37 .................................... CTCGTGAGGACCTCACTGACCAGCATCTGCCGCTGAG 2126411 36 100.0 38 .................................... GCCCCGAACCCGACACCCACGACCACCAGAACACCCAC 2126485 36 100.0 36 .................................... GTTGAGCAGGTGGCAGAATGTACATGCCACGAGACG 2126557 36 100.0 37 .................................... TATACAGCCTTCTTCGTAGGAACGTCAACACCTTCAG 2126630 36 100.0 36 .................................... GCGAAGGTCGGGCTGTTCAAGGACGACGGCGGCCCG 2126702 36 100.0 36 .................................... CCCACCCCTACACAACAGACGGCACGAGCCTCACAG 2126774 36 100.0 35 .................................... CATCCTGAATACATTCGGGCTTGAGGACCAACGGT 2126845 36 100.0 36 .................................... GGTGGCCGTTCCGATTGGTTTCCGCCGTTCGATAAG 2126917 36 100.0 36 .................................... ACGAAGACTGACCCACTCCAGGGACCGGCCCCCAAG 2126989 36 100.0 35 .................................... ACGACGATCCATAGTTCCCCAGAACCTCTCTAGCA 2127060 36 100.0 36 .................................... ACGTTCCGCACCCGGCGCGGGTATGACCACAACATT 2127132 36 100.0 39 .................................... CCGAAGCTCGCTCCTCTGATGAATGCCATCACTTCAGCG 2127207 36 100.0 36 .................................... GGGTCCGGTAACAGCGGGATCGGGCACCCTGCACCG 2127279 36 100.0 35 .................................... CGAACCGAGCTGCGCAACAAGCCCCATTTCTTTGA 2127350 36 100.0 38 .................................... GGGCAGGTGTGGGAAGACGACTGGGCAGAACTCGCTAA 2127424 36 100.0 35 .................................... CCGGCTCTTCAAGGCTGTCCGACCAGACGGGGCCG 2127495 36 100.0 36 .................................... CCCGACAAATTTCCTCGCAAGCGGGCCGCGCACGCG 2127567 36 100.0 35 .................................... TTCTCCTGAAATGCCGTTGTGGCATCAATAGTAGG 2127638 36 100.0 37 .................................... TGGGCTTCCTCCTGTGTGAGCTGAATTTGCTCGACAG 2127711 36 100.0 35 .................................... GGCGACAGTGCGCATGTGATCCGGTTCGGTCTTGA 2127782 36 100.0 36 .................................... TCAAAGGAGCATGCCCATGAACACCACGGTTGTCGA 2127854 36 100.0 40 .................................... GTGGGCGGCGAGGGCTTCCCAGCGGCGCAGGAGCCGGACC 2127930 36 100.0 38 .................................... GTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAG 2128004 36 97.2 36 .....T.............................. GCATTTGCTTGCCCATTTGCTTCCTCCAATCTGCGT 2128076 36 100.0 38 .................................... CGCACCAAGGCCCCGGCTCGGCGAGGGACGGTTGCCGT 2128150 36 94.4 0 ......T............A................ | ========== ====== ====== ====== ==================================== ======================================== ================== 28 36 99.7 37 ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC # Left flank : ATATAGGAATGACGGTCAGATGAGCCGACGAGATTCCCATTGCTTTCTGATCGCCTACGACGTGCCCGATGACCGTCGTCGCACCAGGTTGGCCACGGTACTGAAGGGCTACGGGGAGCGTGTGCAGTACAGCGTATTCATGGTTGATTGTCCGCCGTCACACCTGCTGGTGCTACGCCACGATCTCACCGACGCGATGGATATTGATGAGGACTCGGTGGTGATCTGCGACCTGGGCATGTCCACGTCGGCAGACGCCCAACGCATCACCTGGTTGGGCGGTCAGAGGTACCAGAGCGGCGGACGCAGCATCATCATCTGATGACCAGCGGCTCTGCGGCCCGGTTGTCACGCGGAGCCGCTCGCGTGATGTTTCCCCTTGTCACAAGCAGATTGCGCTGAAGGGGTCATCAATCCTCCACGCGCGAGCCATCCTTCTTCAGCACCGCTCGCAGGCGGCCGGTATAATGCCTAGTGGGAGCCCTGTTCCCACGCCCGCC # Right flank : CTTGCGCCAGCTCTCGGAGACGATGGCGCCTTGACGTGGCGTTGCCCCTCTCCCCGGGCGAAGCCCTCCACCCGTTCAACGTCCCGAAACTCACGGAACTCCCGCCGGCGCCGAGAGCTAGACTCGCCATGAGAAGGTGGGAGGTAGGGCAGACGCCCAGCTGACCCACCTTCCCTTTTTCGCACCCCCGGTGGCGCCAAGAGCCACCGATTCCGTCCAACCGCCCACCCTCTCGTCCACCCGCGCGAGGACCCGTCACCCCGATCAGCGCTCACTGACAAGGCCACGTGGCCGCGCACGAGCCCTAGGCGTTTCCGGACCTGACAGCCGCCATGACAAGGCGTTTTCGTCACGCACTGGCGATGCCGAGACGTGCCCCCACACAGCTCCCCCCGCTACGGTTAAATCCGGCGGGGCCGGCAAGGCATGCCCCCTTCATTGAGGCTGACGCCAATAGATGGGCATTTGCGACACCCGCCAAAGTCCCTCCTCACGGAGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.30,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //