Array 1 4676-1641 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGFIP010000027.1 Paenibacillus sp. F411 contig27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 4675 33 81.8 35 ........................C..CTCT.G TGGATCGCTTGTCACCCCTGAAACCGTTCGGCCAG G [4645] 4606 33 81.8 32 ........................C..CTCT.G CCACCCAACCAGAACCACTCCGTGGGGTCATC G [4576] 4539 33 81.8 33 ........................CG.TCTC.. GCAGCGCATTGACATGTACGATAAGCGTCATCC 4473 33 78.8 34 ........................C..CTCTCG ATGCTCTGGAACGGTCCATCATTTGATCAAAAAA G [4443] 4405 33 81.8 31 ........................C..CTCTC. TGCGCCGCCGAGGGCGTTTGCATGCACGGAG G [4375] 4340 33 81.8 27 ........................C..CTCT.T GCCCTGGGACGTCAAAAGGGCAGTGGA G [4310] 4279 33 97.0 35 ................................T TGTTAATGGCCTGTTGAAGTTGTCGCTGCTGACCA 4211 33 97.0 33 ................................C TCTTAATCCATATCGTCTGTTTGAACAAGAAGG 4145 33 97.0 33 ................................T CGCCGCTGCAGCAAGCGCTCGGAGCTCCGACTT 4079 33 97.0 32 ................................C GTATCCTTTGCGTCGATAAAGTCGGTATCGGC 4014 33 97.0 37 ................................G TTCTTTTTAGACTCCCAGTTTCCGACCATGGCACCTG 3944 33 97.0 33 ................................G CTGTCCTCAGCAAACATAAAGGGCAGGTATCTC 3878 33 100.0 32 ................................. GGCGTTGGCTTTTGTGAAGGGTGATTACAACA 3813 33 97.0 33 ................................C TATGCAGTGCCATCGTATTTCCTCCTTTGGTTT 3747 33 100.0 35 ................................. GGTTCGACCTTGATCGGCTGCGTCTCCCTCTTGTT 3679 33 100.0 34 ................................. TCAATGATGAGCAAAGTTGCTCCCTCATTTTTGT 3612 33 97.0 32 ................................C CACCAACCTTTAGATACCGCGTTTTGATGTGC 3547 33 100.0 34 ................................. TAGCGATTTAATCCGCCGAGGCCGCGCTCGTCAA 3480 33 97.0 35 ................................C GCCTACGCCAGCTGATCTGATCGGCGACCAGGAGG 3412 33 100.0 33 ................................. CTCCTGGACGGTCATGGCTTAACCATCATGAAA 3346 33 97.0 33 ................................T GATAGGCAGCCCGGCTGGTTGCTGCAATCTCTG 3280 33 97.0 35 ................................T CAAGCGCTTTTCCCCATCCGTATCGGCCGCAGGCG 3212 33 97.0 34 ................................G GATTTAGCCTACCGCAAATACACGCTGTCGTCAT 3145 33 97.0 32 ................................T TTGCTGGGGGCGGAGGGAAGGATCTCGGCTTC 3080 33 97.0 35 ................................C AGCAGATCGGGCAGCTGCCAACCCCTAATCACCAT 3012 33 97.0 36 ................................T GGAATGCTTACCCTCGAAAGATTGGGAAGCAAGAAG 2943 33 97.0 36 ................................C TTCCAGGAGCTGTATGATAACCAGCTCGCACTCATC 2874 33 100.0 32 ................................. CCGCGATACCCGGCGTCAACGGTGCCGAGCTG 2809 33 97.0 34 ................................T CTCAAGAGTGACAGCTGTTGTCTTGGTTGATTCA 2742 33 97.0 33 ................................C TTATATCATTATTATGATGCTCATTTTGTTTAA 2676 33 100.0 35 ................................. CCGATCGAGGTCAAGTCACATTAATTGCTCGGATG 2608 33 97.0 36 ................................C CACCGCTCGCGGATGACGCACGCCCCATCTGTTCGA 2539 33 100.0 33 ................................. AACTGTTCAGCTCCTAATCCTGCAGGCCACTTG 2473 33 100.0 35 ................................. TAATTCTGCCGATCAATAAGTAAAGGTTAGATGGC 2405 33 93.9 35 ...........T....................G ATCACTGGGGATATAGAGCAGCATCGGACAACATC 2337 33 93.9 34 ...........T....................C AATAGGTAATATGTAAGAACAACGTAAACGGGAG 2270 33 90.9 35 .G.........T....................C GAATGAAATCGGGTTGCGCTCTGTACAGCAATTAG 2202 33 93.9 33 ...........T....................T TCCATGAGGGCTTCCTGCTCTTCCCGAGCTACA 2136 33 100.0 34 ................................. CTGAACAGGTGCAGTGCGAGGTTCAGCATGAAGC 2069 33 100.0 34 ................................. GTAGCGATGCCGAGCATGGCGGATAGGGAATAAC 2002 33 97.0 32 ................................T TCGGAGATTTCACATCGCGAATCGGAGAGAAA 1937 33 97.0 32 ................................T CTATATCGGGAAGGACTTGGAGAAGGCGTCAA 1872 33 90.9 32 .......A...A....................C AGAAGGGACAAGTATGCGAGATCATCAAAAAC 1807 33 90.9 33 ...........T........AC........... TCGCGCCGCCAAAATCTTTAGATAGTAATGATG 1741 33 97.0 35 ................................C CCGTGGTCGCCGGGCGAGCGGATGGGGTGCCAAGG 1673 33 90.9 0 ..T........T....................G | ========== ====== ====== ====== ================================= ===================================== ================== 46 33 94.9 34 GTCGCACCCCACGCGGGTGCGTGGATTGAAATA # Left flank : TTCTTATGGAAGTAGGTGTAGAGTGTGCTGCTTATCATTACGTATGATGTAAGTACCAAGTCAAGTGCGGGTCAGAAAAGATTGAGGCAAGTATCAAAGATATGCCAAAACTATGGACAACGTGTTCAAAACTCTGTGTTCGAGTGTCTTGTCGATGCGGCGGAGTTTACAGCACTTAGGTACAAGCTGATCGAAGTTATTGATCAGAAACAAGATAGTCTACGATTTTACCAGCTCGGAAACCAATACAAGAACAAAGTGGAGCACATTGGCGTGAAGGAATCCATAGATCTGGAGGGACCCCTCATTATTTAACGGGTAGTTGTAACAGGTGCGAACCTCAAGTGAACATGATTTTCCCAAGACATTCGCACCTGTAAATATCCATATCAAATCATCTTTATCCATATTTTAACTGTAAAAAAGTTCTAAAATTATATTTTAATTTCATTTATGTAGAATTAGAAGTCGATTTATGGTTGATTTGACCAAAAATCGCG # Right flank : CGTAACTTGGAGCTCTGAGTAACAAAGGAAAATGATGTATGCAGGGCATCACGCAGCAGCACGTTACTAAATCTGCTAAATCGTCATTTAAGCCTAGATACAGAGGGAGTGCGATCTGCTATCACACCAAGCCAGACGTGTATTGTATTGTTTGAGGGGCGGCCGTTGTGGCTAACTAGTCGTAATCACGGATTTGTTTTGTCAGAATCGCTAATGATTTATAAAAGGTATGCCGCGAATCTTACGGTTGATATGACGTTTAAAACAAAATTCGCCTTTGTCTATAATCAGTTCTTTTCACCTGATCAGATGCGCTGGATCTTGTTTTATACTATAATGATAGCTGTTGCATCAGGCTGAAGGTCGTGATGTCATGCGCGGTCCAGCTCCCGGGTGCCCGGAAATTTTAAATGAGAATGTAACCGACCCATGAAAGGAAGATCACATTGACAATAGAACCACAAGAGAACGCCCTGCAGCCGGAGGACCGGTACAAGAAG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCACGCGGGTGCGTGGATTGAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.90,-10.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [10-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //