Array 1 42082-43589 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMU01000011.1 Corynebacterium sp. 5A NODE_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 42082 36 100.0 28 .................................... CGCCTCCGACGGTGGCGTGATGTTCAGC 42146 36 100.0 28 .................................... CTATGGGGTGTGACCGTGAAGGAGTTAC 42210 36 100.0 28 .................................... GGCTAGTCTCACTGTCTCTGCTTGTTCT 42274 36 100.0 28 .................................... ATTGGGCTTTGTTGCCTCCCGCACCCGG 42338 36 100.0 28 .................................... CGCCAACATCCAACCCCTGCAAGCCCGC 42402 36 100.0 28 .................................... GGGATCGACATAGGGCCGCGATGGACCG 42466 36 100.0 28 .................................... ACGATTGGCCGGTCCTCTACCAGTACGG 42530 36 100.0 28 .................................... TTTCGAGGTAGTGACGTGGCCCGGGCAC 42594 36 100.0 27 .................................... CTCGTAGAGAATACCGCCATGCACTCA 42657 36 100.0 28 .................................... AGGCGGTGGCGTACCACAATGCTTTCTC 42721 36 100.0 28 .................................... ACCAGACACCACTCGAGCAGCACCTCCG 42785 36 100.0 29 .................................... TACTACTTCCGAGGCCGTACAAGCGCTCA 42850 36 100.0 28 .................................... TCGCGGCGGTGCACAGCCCAGCGCACCC 42914 36 100.0 28 .................................... ATAGCCAACGTCTCACGTGGCGAGACAA 42978 36 100.0 28 .................................... CTACATCTAGTAGGGCGTCGAGCGTGGG 43042 36 100.0 28 .................................... ACTGTAGCGGGGCTCACGCACCAAGCAC 43106 36 100.0 28 .................................... GTCATCGGGCTGGGCGAATGCCGATCCA 43170 36 100.0 28 .................................... ATCCCAGCCGTAGAACTTCCACTCATGG 43234 36 100.0 28 .................................... TTAGACGGGATACGGTGCTTCGCGCGGG 43298 36 100.0 28 .................................... GGTCGAGGACGTGCACGCTGGGGCGGCG 43362 36 100.0 28 .................................... TGGGTGTGGGAGTGTCCACCGGCGCCGC 43426 36 100.0 28 .................................... AGCGGCGTCAGAGGTGTATTCCGGAGAG 43490 36 100.0 28 .................................... CACTGCAGCGTGGGATACGGCCGAGGGG 43554 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 24 36 100.0 28 GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Left flank : CATTCAACAGCAATGGCCAGAGTGTATCGACGGTCTTTCAAGACTTTGCACAGCATTTTGGTTTGTACGTCGAAGGAACAGTGGATCGGCTACAAGTCCCGCGTTGGGAAGGGCAGCTCAGTGCCAGCGAAGGACAGTGAACCGGTGTGGTGCGTCGTGATGTTTGACCTTCCGGTGAAGACCAAAAACCAGCGTAGAGAAGCTAATCGCTTCCGCAACCGGTTGTTCGACCTTGGGTTTTGCCGCGCCCAATTCAGCGTCTACGTTCAGTATTTCCCACTGGCGGCGCGTCTCAGCACGATAGTCAAACAGGTGAAAGGCGAACTTCCCGCAGGCGGAGAAGTGCGTATTTTGTCCGTGACGGACCAGCAGTGGGCAAAGGCGATCCGTTTTTCGAACCACAAGGAACAAGCGGTCGAAGAAATCCCCTCTCAACTAACAATTTTTTAAAAGCGCATGCCGAAAAAGACCCAGTTCAGGCCCTGTTTCTGGGCCTCACT # Right flank : CGAAAATGGGCATGGTGGCGGTCTCGGTTAAAGCCTATGGCGCTGCATCACGCTTAACGGCAGTACCGTTTTCCACGTCCTGTGCTGCGATGATCCTACAACCACAAGCCTGTGGCTTTCTGCAGGATCACCGCATCGCGACCTACCGCGTCGCCTCCTCCAACAGGTACAGCACGTGCTCATAGCTCCGCCCAGTGATTTGCTCCATGCCCAGCTCGCAGGTGCGGTTGGAGGACACATAGGCGTCCACGCGCCCATTGGCTTCGGCCTCGGCCAGCCCGGCGCGCTCGTCGCGGGTGGCGGCGTCGAGAAGCTCGGGGTGGAGCATGCCGCGGTCGCCGGCGGTGCCGCAGCAGCCGGCGCCGCGGGGCACGAAGGCCTCCTCGGCGGCGAAACTGGCGACGCGCACGAGGGTGTCGCTGAGTTCCATGTGGGCCAGCGAGCAGTTCGGGTGCACGGCCACCCGCCCAAGGCGGCGGGTGGGTTCAAGGTGCTCGATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 1 155496-153455 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMU01000006.1 Corynebacterium sp. 5A NODE_6b, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 155495 28 100.0 33 ............................ CTGTCGATGAACTGGTGGATTACGTAGTTTCCA 155434 28 100.0 33 ............................ TTGTCCCGTTGTCTTGAAACGTCACGCCGCTGC 155373 28 100.0 33 ............................ TCCGGGCAATTTCGGATTCACCGTAGCCCCCGT 155312 28 100.0 33 ............................ TGCCTCATCGAGGTATACGGTATCGCCAGATAG 155251 28 100.0 33 ............................ CTCACGCTCTTCATCTTCAAGAGGGCGCTTCAT 155190 28 100.0 33 ............................ GATGCTGCCCCTCCCACACACACGCGGGAGGGA 155129 28 100.0 33 ............................ GGCTAGAGGGCGCGCCATCCGGCCCGTAGTGTG 155068 28 100.0 33 ............................ GCGATCGAGGCCGTGGGGACCGGCTCGTACTGG 155007 28 100.0 33 ............................ CATTCATGCGATAGGCGTAGAGGGCGATGCCTT 154946 28 100.0 33 ............................ GTGGGATAGAGGCGCGATCGGTCCGGACGATAT 154885 28 100.0 33 ............................ CCGTGAGCGGCTGGGCGTGAAGCCCGATGCGGA 154824 28 100.0 33 ............................ GCTTACGCTTGAGATAGATGGGCCTCCAAGGAA 154763 28 100.0 33 ............................ TAGCTAGATCGTCGATAGGAATACCTGCGGTGT 154702 28 100.0 33 ............................ GAGCAAGCCCAAGAGATTCAAGCGCGTGTTTTT 154641 28 100.0 33 ............................ CTGCCCGATAGCGACGGCCGTAGATCAGTGGGG 154580 28 100.0 33 ............................ TGTGGAGCACCGGCTAGGGGGCGGGGATGATGC 154519 28 100.0 33 ............................ TCCCGAGCCATCTTGAGGGTGCAAGATGGCCGG 154458 28 100.0 33 ............................ CTGGGCATGCAATGTGTGCTATTTTCCCAGCTA 154397 28 100.0 33 ............................ CTCGACTATGAGGAATACGAATACGGCTTCCTG 154336 28 100.0 33 ............................ TTTCGACATGGACGCGTTCCGCCGCCGTGTCGA 154275 28 100.0 34 ............................ ATGCGCCATAGACCGCGTCGGCGTTTTCCTCGAC 154213 28 100.0 33 ............................ GTCCCTGAGCTGCTCTTTTGTCCCCTTGAAGGC 154152 28 100.0 33 ............................ CAGCCTTAGCCATCTGCGCCGCACCATCCGCGC 154091 28 100.0 33 ............................ GCCCGGATTGCCGGGAATACCGGTCTCTTCGCC 154030 28 100.0 33 ............................ TCAGGTGTACGACCAGTTTTCCGGACAGCTCAG 153969 28 100.0 33 ............................ GGAAGTGGTGAACGATGGCGCAGGTATATCGCG 153908 28 100.0 32 ............................ CCATCGCCAGCATGAGCTACGAGTACGCGGTA 153848 28 92.9 33 CG.......................... CTACTCGCCACAAGCCTCGCCGAAAAAGGACAC 153787 28 100.0 33 ............................ TGTGGATACCCTCTGGGGCGCCGTCCACGTCGA 153726 28 100.0 33 ............................ GTCTGACCTGAACAAAGATGACTTTCAGAAGAA 153665 28 100.0 33 ............................ CGTTGCTCGCAGCGGATGCAAACCCTCTATTGG 153604 28 100.0 33 ............................ TTGTGCGGCGACGGCCTGCGATTCGACCGCATA 153543 28 100.0 33 ............................ GAACTATCGAAAAAGGTCCAGCAGGCCGAAGAT 153482 28 92.9 0 ..........................TG | ========== ====== ====== ====== ============================ ================================== ================== 34 28 99.6 33 GTTTTTCCCGCACGCGCGGGAGTGGACC # Left flank : TTTTAGATGGCGGTAAGACAGAGCTATCTGGAGGGTGGCTTGCCGCCAATGGCATCGTATTCAAACGTATCCAGGACGCCCCGCCTGTCAGCGTTGAGATGATGCTTCACGCTAGTAAAGGATGGCAGACCTCCCCAGAGCTTGGAGCATCTGACCATATTCTCGACCGGCTCTCGGATACAGCGCCCGACACGGTAAGAGTAGAAGAATACTTACCTATTGCCGTGGGCATAGCCGTGTCAGGGCGTCCCTTGGCCCAACACGGAGTGGCGCATCTCAAAGGCCGAAAGAGGTTTCTTCCGCGCCCGACATATCCAGTAAGTTTATGGACTCTAGAGGTTCTATCGAGGAGACACCGTGGTTCTGGTCTGTTGGCGGAGGAGGTGACGCGCGGGAAATTTAAGACTGTTGCTCCACCGATCGTAGTTTAGTTCGTTCAAGGCGAATAGAAGTTGAATCTATACGCCGTGTTTGCTCGCTAAACCTGCTGTTCGCAGAGT # Right flank : CAAGCTCCTGTGTTTACCTAGCAATCCAGTCGAGTTTGCCGAGGTCACCAAAAAATGTGACCCATTGTGGAGCGTGAGGGGCATCGCAGCGCTATGTGTCCATCTGTCACGATTGTGATCAGCTGTCACCTCGTTGAAAGCATGCATGAAGCATCGTTTCCTGAAGCGGTTGTGCCTTGGCAGCGGTGCTGATTTGTCCGCTGTAGCTTGTGCGCCTGTGACAGGAATCGGTTGCTGGGCACTGAAGACTCTTTCTTACTGTGGTCGGGATGCATATGGGCGCCATCAATTACCGACCTAGATCTGAATACCACTTATCTAGCGATGTCCCGATCCAGTTGAGTAGTTTTTCCAGAGCGTCTTAGGTGGAAACTTGACCGCTCCTGCGTTAACGAGTCCGTGGTCGTAGTGATACTTCGTTTGCGCTTCAGCCTTGAGTGCGGCGGGTGCCGTTTTCAGAAGTACTCGAATGGGCGGTAGAAGACATAGATGCGGCTCTA # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACGCGCGGGAGTGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-10.90,-11.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //