Array 1 46423-42790 **** Predicted by CRISPRDetect 2.4 *** >NZ_JENU01000022.1 Clostridium sp. K25 Contig22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 46422 30 100.0 37 .............................. TTGTCAATCGGTAGTTGCAAGGTTAATACTATTAATA 46355 30 100.0 36 .............................. TTTTGTAGATGTAATTGATGATGATGGCGTACAACT 46289 30 100.0 36 .............................. GCTTTATCGTGTTGAGCTTTATTTAATTGATCTCTA 46223 30 100.0 34 .............................. AAAATAGAAGATAAAAAGAAAGAAATAGAAGCAT 46159 30 100.0 36 .............................. GCTTGTTTAATTGCTTGTTTAGCTTCTCGTTTTGCA 46093 30 100.0 35 .............................. TCACTGCATTTATGACTACAATTTGTACAAGCTTC 46028 30 100.0 36 .............................. GTATTAAATCTTTTTTTCTTTTTGCCTCGTCCGTTT 45962 30 100.0 36 .............................. CAATATAATTATAACATTTATTCTTAATTTTAAAAT 45896 30 100.0 36 .............................. GCTTCTGTATAGTTGCCTAATTTCCCTTTTAAGTCA 45830 30 100.0 36 .............................. TTTAATTTCAAAGTAACAGTTAGAAAATCAAACATA 45764 30 100.0 35 .............................. GCTACAGAACGATTTGTTACTCGTTCTGAAAAGAA 45699 30 100.0 36 .............................. TTAAATTGCTTTCTCCAACTCCAACATCAAGCCATT 45633 30 100.0 35 .............................. TAGTGCCATGACCTCCACTTCTGTTGTAAAATCGC 45568 30 100.0 36 .............................. TATATATTTTCTGCTTTACCATCGTATGCATATTGA 45502 30 100.0 36 .............................. ATATCATACATATCAAAATAATATTTCTGGAGCTGT 45436 30 100.0 36 .............................. TGCTAAAGACGGTATGGAAATATCACAATATCTAAC 45370 30 100.0 34 .............................. GAGTTCCTACAATTGGCAGTAGGAGATAATTTAT 45306 30 100.0 37 .............................. CTTCTATTTACTTTGTATCTACGTATGATATAATATA 45239 30 100.0 35 .............................. TCATAGATTTTAACTTTATTTACCATGTTACCCAT 45174 30 100.0 34 .............................. TGGAAGTGCAACTAATCCTAATTCAATTGTAATA 45110 30 100.0 33 .............................. TTCCATACTCCAAACATTATTATTCTCCTTTCA 45047 30 100.0 36 .............................. AAGAGATGCTTTTGATTGTATATTCCCCAAGCATTC 44981 30 100.0 36 .............................. ATTGCTCTTCCTGTAGTTGTATAATCCTCTAATATT 44915 30 100.0 35 .............................. ATAGCGTATTGCTTTGGCTCTGTACTGTTTTTAAA 44850 30 100.0 36 .............................. TCGAGATGCAGGAACTATACATAGACAATTAAAATA 44784 30 100.0 36 .............................. CAGTGAAAATTAAAGCTAATTAAAATTTAGAATACT 44718 30 100.0 37 .............................. AGAGGTTATTTTATCGAAGATTATGAAGAAGATCCTA 44651 30 100.0 35 .............................. GTAGTTAATGCTCTATCTTCACACATGATTGCAAC 44586 30 100.0 36 .............................. GATGTTTGGGAAACTCTTTATAATGCTAAAGATAAA 44520 30 100.0 36 .............................. GTTTTATTTTCAAAGTAAGTATTGTTTACCTTGTTC 44454 30 100.0 34 .............................. GGTTAGCTTTATTAATTTTATAAATTATATATCC 44390 30 100.0 37 .............................. TAGTTTATCTTCTAAATTCTTTACTCTATTTTTATAA 44323 30 100.0 35 .............................. TAATTAACCTCCTATATACTTTTGTATTACTTAAG 44258 30 100.0 35 .............................. TAATTAACCTCCTATATACTTTTGTATTACTTAAG 44193 30 100.0 36 .............................. TTTGGTTTAGTTTTATGTCATTTTTGACGTGTTTTA 44127 30 100.0 37 .............................. GTTAATTCTTATTTAGAATTAGATAAAAGTGCTAGTA 44060 30 100.0 36 .............................. TTAATTGTATATTTGTTCATTCAAACACCTCAAAAG 43994 30 100.0 35 .............................. AGACATAGTCGAATGTGTTGAAAAGTGGTGCTTAG 43929 30 100.0 35 .............................. GCATTTTCTATTAATAGTTTTATTAAAGTATCTTC 43864 30 100.0 34 .............................. TTGAAATAGCTTTTATTAACCATCAAAATCGTAT 43800 30 100.0 36 .............................. AGGGATAATGCGACCTTATGCATAATTTTAGTTTTT 43734 30 100.0 36 .............................. GCAATTAAAGACATTACAAGACTTATTAGGTTCTAG 43668 30 100.0 35 .............................. GCATTTTCTATTAATAGTTTTATTAAAGTATCTTC 43603 30 100.0 34 .............................. TTGAAATAGCTTTTATTAACCATCAAAATCGTAT 43539 30 100.0 36 .............................. AAGTTCCTGGAGATTTGAGGATAATTGGGATTTAAC 43473 30 100.0 35 .............................. TTTACAGTTGGTTTTTCTAGTAGTGGTGGATTTAA 43408 30 100.0 36 .............................. TCATCTTCTACTTCGATTACTTTTTCTTCTTTTTCT 43342 30 100.0 36 .............................. TGTTCTTCTTGGAGGAGATACAGGCACTGGTAAAAG 43276 30 100.0 35 .............................. GGATAAAGTACTTAGAGTAGAACAAGGAGATTAAC 43211 30 100.0 36 .............................. AAGATAAATTAAAATTCAATTGCAATTCCCCCCTAG 43145 30 100.0 36 .............................. GAATATCTAAAGAAAATATTATCAACTTATCTAAAG 43079 30 100.0 34 .............................. TTTGCTATCCAGCTTATGCTCTTATTTTCTCCAT 43015 30 100.0 35 .............................. TCAATCTTAAATCCGAATTAGGTTGCCAGTTATTT 42950 30 100.0 36 .............................. AGTTTATACTAACCTTTTATATTAACTATAACAACT 42884 30 100.0 35 .............................. TCTTGTTCACACATTATTTTTAGTAACCCTTTATC 42819 30 93.3 0 ........................C.T... | ========== ====== ====== ====== ============================== ===================================== ================== 56 30 99.9 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : AAGCCATTTAGGCTTAAGGATAAGATATAATGAGTAAAAAAATTAATTATAATTATGCATTTTTATTTTATGATGTGAAAGAAAAGAGAGTAAATAAAGTGTTTAAGGTTTGTAAAAAGTATTTAACTCATTATCAAAAATCTGTTTTTAGAGGTGAGATAACACCTTCTAATATAATAAAATTAAGAGAAGATTTAAAGAAAGTAATAGATGAAAGTGAAGATTTTATATGTATAATTAAATTATTAAATAATAAAGTATTTGGAGAAGAAGTGTTAGGAGTAGGTATTGAAACTGCAGAGGATTTAATTTTATAAAATTATTATCCCAACCGATTAAAAAATTCAAACTAGTCCCAATCCTTGATTTAACTGTTTTTGAGTGGTATTTTGGTTTAAAAAATTAAATTATGAAAGTTGGTTGGGAAAAAACTAACGAAAGTGTTTATTTTCAATGATCTTAAAGGTATAATATAAATAAGGAATAGCTATTTTACTATG # Right flank : AAAAATTAGTTAAATACTAATACAACAGTTTAAAATACCCCTATAAGTAAAAACTTATAGGGGTATTTTAGTTATCTGGAGTAATTAAATTTATATTGTGTTCTTCAAAAAACTTAACATACTCTTTAGGAGGTATCCTATCTGTAATAAAACAAGTAATATCTTCTAATTTACAATAAGTTTTAAGAGAAGCTGTATCTAACTTTGAGTGATCAGCTAAAAGTATTACATTGGAACTATTTTCAACTACTGTTTTTTTTACTTCATATTCAAAATTAGATGAATTTGTAACTCCTCTATCAATAGAAAAACCTGTAGTGGCCATAAATGCTTTGGATATATTATAATTCTTTAAAAAATTCGAAGCTTCTACACCAATTAAAGAATTAGTTTCTCTAAAAAGAGTTCCTCCTGTGGATAATATATCTACATTTGAATAAGGCAAAGCCTTTAGTAATATATTAAGATTGTTAGTTATTATAGTTAAATTTTTTCTATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 24231-24781 **** Predicted by CRISPRDetect 2.4 *** >NZ_JENU01000053.1 Clostridium sp. K25 Contig54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 24231 30 100.0 36 .............................. ATGGTTTGAAGGTGGAAAATTGACAAAAAAAAACCC 24297 30 100.0 37 .............................. TAAGACCAAAAAGGAAATTGTTCTTGCCATTCATCTA 24364 30 100.0 34 .............................. GGTATAACACCTCCTATTTTAGGACTAGCAAAAC 24428 30 100.0 34 .............................. TGTGCTAATATTAAAAATGGAACTGCTGGAGCAT 24492 30 100.0 35 .............................. AAACGGGTGGAACAGAAGATTTATGTATATGTGCT 24557 30 100.0 34 .............................. TATAAATTGTTGAGATTATTTATCTCATTCTTCT 24621 30 100.0 36 .............................. TTTACTCTTAATGCTCCATTGAATTTTAAAGATTTT 24687 30 96.7 36 .............................A ATTCGAAATATCGGAATATGTCTAATATCTCGAACA 24753 29 73.3 0 .............T....-.T.AA..C.TA | ========== ====== ====== ====== ============================== ===================================== ================== 9 30 96.7 35 GTTGAGAATCAACAAAGGATATGTTTAAGC # Left flank : TAATATACTTAATAAAGATAAAGAATATGAGTTTACTGTTGAGGATGAAGTTATAGCATATGACCAGATTAAAAAACTTTATGAGGCTATGGATAAACTGGAACCATTGGAAAGGGAGATTATTAGTAGATATTATATTAATAATGAAAAATTTAAGGATATTTCAGAAGATAAAAAGCTTTTATATGATAGGACTATTTATTTGAGGAGGAGAGCTGTTAGAAAACTTAGAGGGATCATGGAAAAAAACAATAAATTTAAAATATTATCATATAAAAATTGAATAAATATAATCGTATGTGTTAAAAATATAAATAAAATTATTACCAACCATAAAGGTCGACTTAGCGTCCTAAAATTGAGTAGTACCAATAAGTCTAATAAGATTAGCATGGCAACTCTCAGTAAGCCTCAATTTGATTGGGAAGCTTTGTGCAGATGCTAGTAATAGCAAGGCGTACAATGATATATCCATATTTAAAAATGGCTTAGATACAGAG # Right flank : ATAATAAATAAGTTTAAAATTAGTGTTTATTGGAAATATTATAAATATATATAATATTTTAGGTAAGGAAGATAAAACATGAATAAATGTATAAAAGTAGCCATAAAGAATTGTAAGGAACTAGATTATAAAGTTATGAGTGAAAAATTAAGAAATATACAATACTTAACATGTAAAGCTAGTAATAAAGCCATGCAAATGTATTATATGTGGGAGAATCAGAAAATAGATATTAAGAATAAAACAGGAGAATATCCTAATGATAAAGAATTATTTGGAAAAACCTATAGAAATGTAGTTGAAGGTGAAATGAAAACTATAATGAATACCATAAATACATCTAATGTAGGTCAAACCAATGCAATTATAATGAAAAAGTGGAATACTGATAAAAAAGAAGTTCTATCATATCAAAAATCTTTACCTAATTTTAAATTAAATATGCCTATATACATAAAAAATAAAAGCTTTTCAATAGTAAAAGGTACAAGTGGATATGA # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAGAATCAACAAAGGATATGTTTAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-91.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 36184-38059 **** Predicted by CRISPRDetect 2.4 *** >NZ_JENU01000053.1 Clostridium sp. K25 Contig54, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 36184 29 100.0 37 ............................. CACTCTTGTGCTATATTAATTAAATCTAAGCATGTTA 36250 29 100.0 38 ............................. CTGCAATAATTAAATTAGGAATTATCCTATCATTGTCG 36317 29 100.0 38 ............................. TTTCCTGTAACTTTAGTTGTCTTGTACGCAAAAGATGC 36384 29 100.0 37 ............................. AGGTTAAAAAGTGCGGTTGCAACAGGAGTGCGATTAC 36450 29 100.0 37 ............................. ATCTGGTCTATAAACATATAACTCAATTATTTCTTGT 36516 29 100.0 37 ............................. TCATTTTTCTTACCAACAGAAGGTAAAACTCTGTCAT 36582 29 100.0 36 ............................. ATTATAAGTGTTGAAGTTAAAAATAAAAATAACAAG 36647 29 100.0 36 ............................. ATTTCTTCATCGCTTCGCCAGCTTGACCAGCACCGG 36712 29 100.0 40 ............................. TTCTTTGTTTTTTCTTTATTTGTAATACTTTTTATACCTA 36781 29 100.0 37 ............................. TTTCCCCGCGTTGCTGGTAATAGTCTAGTTGCTTGGG 36847 29 100.0 37 ............................. CGTAGAAATGTCTAAGACTTCTTAAATTCATAGTAAC 36913 29 100.0 36 ............................. AGTCATAAGACTTTAGGACTTCCAGCCTTGTATTTT 36978 29 100.0 36 ............................. TTTTCAAAAGTTAAAAATTCTGACCTGCTTATACAA 37043 29 96.6 36 ............T................ TCATCTGGGATAGTATCAGAATCAAATTTAATATTA 37108 29 96.6 37 ............T................ GTTATAAAAAATAGAAATATGAATTTAGTGATCTCAT 37174 29 100.0 38 ............................. TATTATGACATACATTACATAGACTTATAAGGTTATCA 37241 29 100.0 38 ............................. TTAAGCGAAAAAGATATAAAATATTTAGCTGATGGTGC 37308 29 100.0 35 ............................. CCTGTGATTCGTACAGAAAATAACTTTCTATACCT 37372 29 100.0 38 ............................. CTATATCTTGACTAACTCTTTCGGATAGTACTTTATAA 37439 29 96.6 37 ............T................ AGAAGCTGTGACAAATCATTTTTAGTATCATATGCCT 37505 29 96.6 37 ............T................ AAAAAACAAAACTATGGGAGAACTTCTTAATAAAGAA 37571 29 100.0 36 ............................. ACAATCTTAATGTAAGAATCTGATACAGGTTTATGA 37636 29 100.0 38 ............................. TTTACGGTGAGGGTCAAGGGGTTTTTTATAATTTATTT 37703 29 100.0 36 ............................. GCGTTTGTTGTATCACTGTCTTTAGTATCGTCAATG 37768 29 100.0 36 ............................. TTGTTTTGGAAATGGTTGTAATAACAATAGTTTTGA 37833 29 100.0 37 ............................. AAAAATTTAGGAATTCTTAAGAAAGCTTTAGATACAA 37899 29 100.0 36 ............................. TTGTGACAATGTACAGCATTATCGTGCGCATAGTCA 37964 29 100.0 38 ............................. TATTAGACATTTCATTGTTAGCATCTTCAAAAGCCTTT 38031 29 96.6 0 .........................G... | ========== ====== ====== ====== ============================= ======================================== ================== 29 29 99.4 37 GTTTTAGTTTAACTATGTGAAATGTAAAT # Left flank : TAATTATGAAGAAGGACAAAGAGAATCTCAAGCTGATTTTATATGCAAAAAATGTGGTTATAAAGTTAATGCTGATTATAATGCAGCTAGAAATATCGCTATGAGTAATAAATATATAACAAAAAAAGAAGAAAGTAAGTATTACAAAATTAAAGAAAGTATGGTATAATAAAACATAGTTAAACTAATAAAAACAGGGCGATTTAACGTCCTAAGGCTGAGAGAAGTTTTTTCTACTCGGCAAGGGTTAATCTCGATTGTTGTGTTACCGATCGAGCGTTTCACAAAATGCGAGAGAAATCTCGCATTTTTAATTTTGCAGTAAGGCTAGTTTTTATATAAATATGCTATAACCATTGATATTGCTAGGCTACAATAGGTTTTATTAAAAAAGCAAAAAACATTACTGAAGGTTCACTGCAAAATAGTGTATTTAAGTGAAAGTGAGATTGCTTGTAAAGCTAGGAGTATCAATATATTTATAAATTTCAAAATTTAGG # Right flank : TGAGCATAGCAATAAATTTCGTTTCATTTTGTTTGAGTAAGTTTTAGTAAAATACTATGAAGTGAAGGGATACGTATTATGAAATTTATCGAATCAATAGATCCTTTTTTGATGCAGTTGGTTATTGTTCCGCTAATAGTAATTGGATTAGGTGTTTTAGTAGCTTATAATATTAAAAATATATTAATTGGACCTTTAATAACATTGTTTTTAAATAGTTTATATGAAATTTGGTATATAAAACACTATTGTCCTGGATCAGAAATTAGTTTGAGTTCTTGGAATATTATTCTTCCAATGATTTCATTTACAATTTCTTTGATTGTAGTATTAATTAGAGAATAGGGTAATATTTAATAAAGATTATTTCTTAGGCTAGGTGAAATGTAAATAACCTGGATTTTCTTTAGTTGTAATAATATCAATACTAGGTTTTAGTTTAACTATGTGAAATAGAGAAGCAGAATATAAAAGCTGAAACTACAAACTCTCCATCATGG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTTTAACTATGTGAAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //