Array 1 870-47 **** Predicted by CRISPRDetect 2.4 *** >NZ_QEIW01000260.1 Staphylococcus pseudintermedius strain ST496 9 21_S21_L001_R1_001_contig_262, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 869 36 100.0 30 .................................... TGCAGGAATCGGTTTTGTCCTGTATGCGCG 803 36 100.0 30 .................................... TATTTAAATTACGTTTCGCACGTTCAATCT 737 36 100.0 29 .................................... AAGTCATCAGCCGAAAACGCTTCTGATGT 672 36 100.0 29 .................................... GGAGAAAGCTTTGTGTCGACAGATACTAA 607 36 100.0 29 .................................... AATGTGCTTTTATACGTTGTTATCAGTTG 542 36 100.0 29 .................................... ATTTTGTACCGAATAGCGTTTCAGGGCGC 477 36 100.0 30 .................................... AGAATACGCCGTCGTCTTACCGCTTGCAGT 411 36 100.0 29 .................................... CATTAACTGCTTTGTCAAACTCACTAATT 346 36 100.0 30 .................................... GGAAAATGTGGTAATGAAGGAGGATTTTGA 280 36 100.0 30 .................................... AGAGAAGAAATTGTGGCAATACGGTATTGT 214 36 100.0 31 .................................... CGTCGATTTCGACATAATCAATCGCCTTATG 147 36 100.0 29 .................................... AATATAAAAGGCGCTAAGAGGCGTTATAT 82 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 13 36 100.0 30 GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC # Left flank : | # Right flank : CTGAGCCTTTATCATTTAGAACAGCTAGAGTGTTTTAGCACTATGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //