Array 1 25538-25717 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLVH01000036.1 Capnocytophaga canis strain CCUG 42328 NODE_36_length_25854_cov_5.116376, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ==================================================== ================== 25538 26 100.0 52 .......................... GTATTTTTTGCCAACCTGTTATCCCCTTGGGTTGTAAATTGCTTTCAAATTT 25616 26 96.2 50 ..C....................... ATTAATAAAAGACGTAGCCGATGCCAACGCGTTGTAAAATCCTTTCAAAA 25692 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ==================================================== ================== 3 26 98.7 52 TCTGTAACTTTGTGATTAGTTACAAC # Left flank : TCGACTTTCGTCTTTCCAGCATAGAGTACAGAACATTACTTCAAGGTTATCCTCCTGATTGGGATTGTCGCTATGCACCTTTCCAATTTCAAGATTGGCTATACATAACACGTTCAGGATTTTGGCTAAAAAAAATCGGCTATACTAAAATTTTTGTGAAGATTATTAAATCTGTATTTTTTGATTTTTAAAAATTTGTGTTCATTCTGTACATTTGTGGTCAAATTCAAACCACAAATACACACAAATTTTCACAAATATGCTTTCAATAAACTAAAATCACTAAAATTATAAGGACTATTTTTTTGAAAGGTCACCACAAAAATTTTACTAATGCCAAAAATCAAATACGAAAAGCAAGAGGATGGTTTTTATCATCTTTCTCGACATCTTACGTCAGAAAAAGGACGAGGACATAATTTACTGCTTGAAATCTTTTGTAATGGATACTTTAAACCTTCATTATTTGAAGTCGTACAAAGAGCGGGCATATTAAATCG # Right flank : GATATAGAAACCTTAAATTCCATTAGTAAGTGCAATTTTTTGGGATCGTTTTTCTCTCTTTTTTCTTTGGGCTAGCCCAAAGAAAAAAGAGAGAAAGTAAAAAAACTTTCTCCCTTCAAAAAAATGTTATTTCTTTG # Questionable array : NO Score: 4.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.60, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTGTAACTTTGTGATTAGTTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.23%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 1 104210-105547 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLVH01000004.1 Capnocytophaga canis strain CCUG 42328 NODE_4_length_105716_cov_5.129133, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 104210 46 100.0 30 .............................................. TCAGAAGTGAATGTGATTGTTTTTCCAATG 104286 46 100.0 30 .............................................. TTGACAATACAATCAAAAACAAACAAGCCA 104362 46 100.0 30 .............................................. CCGTTTTGCTGTATCACTGACGGAAGGCAT 104438 46 100.0 30 .............................................. TGCCGTTGAAAGCCCGTCCAAATCGCCACT 104514 46 100.0 30 .............................................. CGGCTTTCCAAATGTATTTTTTGACATTGT 104590 46 100.0 30 .............................................. TCAAATCGAACGAACTACGAATAAAATACG 104666 46 100.0 30 .............................................. CCGAGCAATGGCACAAGCCCAAAAAGAAGC 104742 46 100.0 30 .............................................. AAGCATATCCGAGAGCTATACAGCCCTCTA 104818 46 100.0 30 .............................................. TAATATAAGTATTGATTGGTTATTAACAGG 104894 46 100.0 30 .............................................. TTTTGGCAGTAACCCAACTTGAAAATATTT 104970 46 100.0 30 .............................................. TGCGGTCATCGGCACGAAGCGGAAGCGTTA 105046 46 97.8 30 .............A................................ CCCCTCACTTGACGTTATTTGCATTCCGCA 105122 46 97.8 30 .............A................................ TTGCTTCGTTAGTACGTTTGTATTTCAGTA 105198 46 97.8 30 .............A................................ CACGGGTAAAATAAAAACAGGTTCTGCCAG 105274 46 97.8 30 .............A................................ GGTTATAGTTGGGGTTACTTTTGCAGTTAC 105350 46 97.8 30 .............A................................ GGTTATAGTTGGGGTTACTTTTGCAGTTAC 105426 46 97.8 30 .............A................................ AGGCTAAAAAGTGAAAACGAATTGCTACGA 105502 46 97.8 0 .............A................................ | ========== ====== ====== ====== ============================================== ============================== ================== 18 46 99.1 30 GTTGTAACTAATCGCAAAGTTACAGATTTTGAAAGGATTTTACAAC # Left flank : AAAGCAGCCAATCTCTTCCGAAAACGCTTGGAAGATGATGGATTTTCTTTATTTCAATTTTCGATATATACGAGACACTGCCCTAGCCGCGAAAATGCCGAAGTACATATAAAAAGAGTAAAATCGTGTCTCCCTAAATACGGTAAAGTAGCAATTATGTGTATAACAGATAAGCAATTCGGAGAAATCGAATTATTTTATTCACAAGTCAAAGAGAAATTACCTCCCACATATCAGCAATTGGAACTGTTTTAGTAAGTAGATTAAGATAGCTTCTAAATTACGTGTAGTATCTGTATTTAAGACGTGTTGTACTGATTTATATTTTGTTTGTATACAAGGTAAATTCGGTATAGAAGGGCTTATTTATGTAAATCAAAAGGACAAAATAGGAATAAAAAAATGTAGAAAATATACAATTTTTAGATACTTTCCATGTGTTTTTTTAATTGAATAAAAAGGGGCAATCCTTTGATTTTTAGTAGATTGTCCCTTTTGAG # Right flank : GGATGTTCCCAAATGTTGAATTTTTAAAGAGTTGTAACTAATCACAAAGTTACAGATCTTAGATTCAACCCCCAAGTGCAATTTTTTATGCCACGAATTTATAAAATAAATTTTTAGGTTCTTCAAAATCTAATGTTAATCTCGGTCTTCGGTTAATTTTATGTTGAAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTAATCGCAAAGTTACAGATTTTGAAAGGATTTTACAAC # Alternate repeat : GTTGTAACTAATCACAAAGTTACAGATTTTGAAAGGATTTTACAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //