Array 1 1-395 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATUW01000019.1 Winkia neuii subsp. neuii DSM 8576 G437DRAFT_scaffold00019.19_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1 30 100.0 31 .............................. AACATGGACTCCGACCTATGCCTGTCCAACC 62 30 96.7 31 G............................. CGGTTTAGCATTCAACAATATGCTGTTGGCA 123 30 96.7 31 T............................. CTACAGGCGGCAGGCGGGGATGTGCTGCTTA 184 30 100.0 30 .............................. GGGCCGCGTATGCTATGTATAAAAAAGTGT 244 30 100.0 31 .............................. TGGTCTAATGAAAGCCTTTGGAACATGGTTG 305 30 100.0 31 .............................. CTTTCGGTTGTGCGCGTGCCAGGCTGGGCGG 366 30 93.3 0 G............T................ | ========== ====== ====== ====== ============================== =============================== ================== 7 30 98.1 31 CCTTTTCCCCGCGCGAGCGGGGGTAATTCC # Left flank : | # Right flank : CTGGGAAGTCTCGCTATATGGGGCGGACAGGTCCTTTTACCCGGGAGAACAAAACAGGGAGAAATTTCGGTAAATGCTACTCGAGGGCTGTTCAGCGGCCAGTTACGCGTAACTCAGATACATGTAGGAATAATCGTTTAATATATCCTAGCCGTTTCTGTAGCTGTTGCATTTAGTTGCAGTAGTGGCCATTCTTATCTACACCTAACCGTATTGGTTTCAGGCTATTTAAGGATATTCCCTGTCGTAAGTTGCATGCCCTGTGATTGATCAACGTAGGGGCCGCGTCAGCAACCATTCCTGAGTCTTTTAGGCGTTAGAGCTGCAGCTTTTCCTTCAGACTTGCGTACCATTGTTCTCGTGTGCCAACAGTGGTGAATTGCTGGCGTCTAGGTGCTAATTCCTGTCCGGGAACATAGTCCTTTATAGTGGCGAACCGTTCTTTTGAGTTGCTGTTCGTTACGAATAGTGGCAATTTCGCGAAATCTTTTGTGGGACCT # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCTTTTCCCCGCGCGAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.00,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 279-6 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATUW01000009.1 Winkia neuii subsp. neuii DSM 8576 G437DRAFT_scaffold00009.9_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 278 29 100.0 32 ............................. TATTGAGGCCGGGGGGATTTTACCTGCGTCCC 217 29 100.0 32 ............................. CAAGCGTACCAAGGGCAAATCAATTTCTTAAC 156 29 96.6 32 ............................T AATGGCATTAGATAGTAATATGTCCCTATTAT 95 29 100.0 32 ............................. AGTGCGAGGCGTAAGCCAGCGCAAGCGTTGGG 34 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 99.3 32 CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Left flank : AGCAAGGACGGTGCCACAGGTACCGACGAGGGTGGCAACGCTTCTGACGAGGGCGGCCACGCTTCTGACGAGGGCGGCCACACTAGCGATCCTGGCGCGCAACCCGGCACCCAACCTGGTTCGCAGCCTGGGGCAAAGCCTGGTTCGCAACCCGGTGCTCGGCCCAGCGGCGAAGGCAAAAATGCTGGGGGCAAAAACGCCGGCAAGTCTGATGCGGGACGGCAAGCGGGTGAGCCAAAAACAGTCGGCTCGTTCTTAGCCACAACTGGAGCGACAGCTTTAGTACCCACCCTGCTAGGAGCCATGGCAATGATTAGCCTGGGCGCAGTTGCAAAACTAAGCCGCAAAAAGAACTGACCGAGGCTAGCGTCAGAGGCTGAGCTGGAGAACTTAGATGGTGCGTTACTAGGTATAGATACGCGCCTTGCATGCGCCAGACTGTAAGATAGCTACCAGCATGGAAGAATGATATAGACGCCCAAAAGCGCAGGTCATTTAGT # Right flank : CGGTTA # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTCCCCGCGCGAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //