Array 1 311062-311955 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FBLJ01000011.1 Campylobacter coli isolate H061980521a, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    311062	    36	  83.3	    30	AACCG.T.............................	CCTATTGCAACCCTTGTTTCACGGCTATAA 	
    311128	    36	 100.0	    30	....................................	GCATTAATGCGAGATATTAGCAGGGTTGTT 	
    311194	    36	 100.0	    30	....................................	TCCAACTTCTAAGCTAACTAAGTTTCTTTT 	
    311260	    36	 100.0	    30	....................................	AGCCATTTTGCAGATATATATTCATTTTTA 	
    311326	    36	 100.0	    30	....................................	AAATTAGTATTTTTTAACTCGACTGTGCCA 	
    311392	    36	 100.0	    31	....................................	TATACTTAGCGGTGCTACAAAACAAGATTTT	
    311459	    36	 100.0	    30	....................................	GGGACAGGCGGTAATTTTGAAGACTTACAA 	
    311525	    36	 100.0	    30	....................................	ACCTATGGCATTAAACAATTTTTCACATTA 	
    311591	    36	 100.0	    29	....................................	TCTTTAATATCATCAACAGAACCTTTAAA  	
    311656	    36	 100.0	    30	....................................	TCTTGCTGTATTTTTGCAAAAATCATCAAA 	
    311722	    36	 100.0	    30	....................................	TAAAAAAGCATCAGGGCTAGCTCCATTTTC 	
    311788	    36	 100.0	    30	....................................	GGAAAAGAGTTAAAAGAGCAATTAGAGTTG 	
    311854	    36	 100.0	    30	....................................	ACACACACATTTTCATCAACTGCTAATGCA 	
    311920	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        14	    36	  98.8	    30	GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT	                               	       

# Left flank :   TTATATCCTGCTCATCTTTCACTTGCTAAGTCTTAATCATAAGCTTAAAAATGATTATTTTGCTAGAGTTGCCATAAACTGCGTGGCATTATTTATTTTTATTTATGCGGGGGTTAATATTTCGATGACTATAGGTTTTGCACCGGTTGTCGGTATACCACTGCCTTTTTTTAGTTATGGTGGAAGTTCTTTTACAATTTTTATGATTTTCTTTGGAATTTTACAACATTTAATCACTTTTAGATATTTTTGGACAGATAATAAAAATAAATAAAATAACTTTAAGCAAAGATAAGATATAATTCTATCTTCACAAATCAAAGGCGGATTTATAGCTCAGTTGGTTAGAGCAACCGGCTCATAACCGGTTGGTCGCAGGTTCGAGTCCTGCTAAATCCACCACTACTTTAGTTGTAGATATCTAATCCCAAAAAATGAATTAAATTAACTTTAACTACAAATAATCTATACCGTTTACTATCACCTTAAATTGAAATAGA
# Right flank :  TAGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCTTGTCTAATTTTATTAGACTTAGTTTGCTTGATTGGATATCAATATACTTTTAAAAGCTTCATCATATGCCATGTTTTTTGCTCGTCTTTAAGGCAATATCTTCCCTTGGTTTAAAATCAGCCTTAATTTTTTCTCCAAGCGGGGTTATAATGTATTTTTCAAAAATTTTCAATCCCTGAATTCCTAATTTTTCAGCCTTTACACTTCCTTCTTTTGCATTTACAAACAATAGCTTTTGATTGTCTGTTAAGTTTTCAAATTTATTATCATGTTTTTCAACACAAATACTTGAGTTACCGATATCAAAACTATTATAATAAGCAAATTCGGG

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:80.56%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [6-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [78.3-80.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0.41   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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