Array 1 2188163-2186274 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP067042.1 Lacticaseibacillus rhamnosus strain B6 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 2188162 36 100.0 31 .................................... TTTAGAATACGATTATAAGACAGTAGTTTGG 2188095 36 100.0 30 .................................... AGTAAGGTAGCCAAATACAACCATAAGGGT 2188029 36 100.0 30 .................................... AACTATCTAACACGCTATACACAGAATGGC 2187963 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 2187897 36 100.0 30 .................................... TTTAATATGCAGGCGGCGACTGATTTATTT 2187831 36 100.0 30 .................................... TGATTTGCGAGATGTCGCGATAAGAAGTCA 2187765 36 100.0 30 .................................... GACAACAGACTCCGTCAACATCAGTCTTAA 2187699 36 100.0 30 .................................... ATAAACATCGTATGCGAATCGTAACAACGT 2187633 36 100.0 30 .................................... AGTTGATTGAGGCGCGGATGTACATTCCTG 2187567 36 100.0 30 .................................... CCGTTTTGGTTGCAAAACGAACCGATTACG 2187501 36 100.0 30 .................................... AAGGTGTACTGCTTAGCTGACTCCCACGTG 2187435 36 100.0 30 .................................... CTCGTGACTTGTCGTGATATGCATACGCGC 2187369 36 100.0 30 .................................... GAAAGTTCTTTAAGTTGACCACTCATTTCA 2187303 36 100.0 32 .................................... TCAGGGTGCCGGCTACATATACACGACTTTCG 2187235 36 100.0 30 .................................... TCTGGAAGCCCGCAATAGTCAATTGAAGCT 2187169 36 100.0 30 .................................... AAATGGTTTGAATACCCTTATCCCGCCATT 2187103 36 100.0 30 .................................... TAATGACGCTTAACGCTCTCCGGTTGGTCT 2187037 36 100.0 30 .................................... AGTCGTGCAAATCCACGTGCGCGCGTTGCA 2186971 36 100.0 30 .................................... TTTTATGATGGGCTTGTATTTTCCCAAATA 2186905 36 100.0 30 .................................... GGCAATTTTAAAGCCGTGACCGATGCCACG 2186839 36 100.0 30 .................................... ATGACGCAGTTGGCGAAACCTTTGCACGTT 2186773 36 100.0 30 .................................... TCGCTGACATTGACCATCAACGGCGCCGAG 2186707 36 100.0 30 .................................... GCGTGTTAGTCGCTTGTGTGGCTTACCGTT 2186641 36 100.0 30 .................................... GCGGCATCTTCAAAATCAAAACGACGCGCA 2186575 36 100.0 30 .................................... GTTGACGCGTTGCGCTGTCGCTGGCCGTTG 2186509 36 100.0 30 .................................... AAGCAACATATCAATCAAGCCGAAAAAAAG 2186443 36 100.0 30 .................................... TGATGACGAAGTGAGTTTGCCCACCGCTTG 2186377 36 100.0 30 .................................... ACTCGGGTATTGACAAAGATCGACGCGGCA 2186311 36 86.1 0 .......................AA.C....G...G | T,C [2186277,2186283] ========== ====== ====== ====== ==================================== ================================ ================== 29 36 99.5 30 GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Left flank : GAGCTGGATTTGGACAAGTTATTTCAACGCTTGATCATCAAAAAGGTAAGCCAATTGATAGAGGATCAGCGGCTGATTGAGTTGATTGAGCAGTCACAACGACTGGCAATGAGCTTATTGAGAGAGCCGTTGTTAAGTGAACTTCCAGTCACAGTCGAACCTGGTGGAAAACTTGAACAAATCATGAAATACTGTAATGTTCATTTTGATGAGGAAGTACTCACGGAGCCTTTCTCGAAAGTTGAAGCGGCAATTCAGACTTTGGCGAAACTTGAGGAGAAACGTCTTGTCATTTTTGCCAACATCAGTCATTATTTAGATGTTGAAAGTCTGAGCAAGCTGTTAGATCAGGTTAAGAACACATCGTTGGAATTACTTCTCATTGAATTTTCAGATGTCGAACGCAGAAAGTTTTTTGAGAAGTGCCAGTATATCTATATTGACAGAGATTTTATGGATAGCCGAGAACTGATTGATTAAGAGGCTGTGTGAAAACACCG # Right flank : ACTCACCTCATAAATGCTATGCAAATCCCAAAAGAAGGCAACAGCAATGTCAAAAGCGAAACTAATCCTTTCGCCAGTATTTTACACTGATCTCAAAGAAATCCGTCACATGTACCAACAGGCGTTCAAATCACTTTACGGCAAATATCAAGATCGGGAAACCAATCCCTACTGTGAATCGTTGAAAAGCTTACAGAAAAAGTTCAAACGGCCTAACAATGCCTTCTTCTTTATAACCGTTGAAGATAAACACATAGGCCTGATTCGCGTTGTAACAGATCTCAAAAATTCGGCAGCCCGTATTTCACCATTTTTAATCTTGCCGTTTTATCAAGGAAAGGGATACGCTCAGCTCGGACTACAGTTGATTGAAGAACAGTTTCCGCTCATTCAAACATGGTATGTAGACACGATTGCGGAAGAACCCAAGTTGGTACATTTGTATCGCAAAGTCGGTTTTCAGCAGCTACCAGATCGGGAAACGACGATTAATGAGCATA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: R [matched GTCTCAGGTAGATGTCAGATCAATCAGTTCAAGAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //