Array 1 60354-60040 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGEQ01000068.1 Bacteroides fragilis str. S36L5 gbfS36L5.contig.67, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 60353 35 100.0 36 ................................... CCCCGATGCGTTGTGCGGCATGAAAAATTTTTATCA 60282 35 100.0 33 ................................... TTCCGGAGCTTCATTCCAATATAGCTCCTTACA 60214 35 100.0 35 ................................... TTGAAACCAGAAAAGATAAAAACTCTTTGGGAAAA 60144 35 100.0 35 ................................... GAAGGCAATTGCTTTTTTTGCCAGCCAATTGTAGA 60074 35 85.7 0 ...........................C.A.C.GT | ========== ====== ====== ====== =================================== ==================================== ================== 5 35 97.1 35 ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Left flank : CATAGGCATCTTGAAGATTCCCCGCATTCACTCGAAATAGTTTTTTTCTAAATTCTTTTGCGAAAAAAAGAAAAAACTTAGTCATCTGATAATATGAAGATTATTCTATATTAAGAAAAAATAAGTGTAAAAAGAGATGCGCAAATAATAGCTTTTACGTATATTAGCAAATCATTTGCGAAAAAAGGATTGATATGTTATGCGCTCTTTGAAATATTGTTCTATATATCAGCAACTTACGCAACATAGTTTTAGGGTTGTTTTCGAAACTCGCCCACCCCTAAATATCCAACGATTATTTGCGAAAAATGAAGTTTACACAGCATTCTAATTATCAATCATTTAGGTCAAAAAATCACTATTTACACATCAGAATTACAGAAAAAAAGACCTACTTTTGCGAAAAAAGACTTAGATTCGCATCTACTATTCTGGTTTACAACCTATTATGATCACAGACAAATACATTTAAGAATATATAATAGTCTAATAATCAGAGT # Right flank : TGGTTCTTCTTCAAATTTGGTGGTAAGCTTTCTTCTACTCATGAATCTAATTCAGTTTTCGGAAGTGTAAGCTCTCGTTTATAGTTGACAAGAAAGCAAGTATCCCGGCTTTCGCCCGAAAAGCCCATTCGTGAGGCGGAGAAGCGAATTTTAGACTAAACCATCTGAAAATCAACATCTTTAAAAAGTAAGATTTCTATCCTCAAAAGCTTTGTTTTAACACAGAGTTAAAGCTTATTCTTTGGATGTAAATAACAAGTTCTTTAAATGCATAAGACTTGTTATTTGCGCACAAGAACCTGACAACCTGAAAAAGGCGTTAACAATGTTAATTGAAGAAAGGTATAAGGATGAAGATACTGGTTCAGACGGTGTAGATTCACTTCCGAAACTTGAGTTATCTGATTCAGCCAGTGTCTGTTTTTTCTTATTAAAGCGTAAGCATTCGGCTTCGTGCGTGTTTCTCTCCAAGTTATAATAAAGTCAAAAGCCAGACGTAT # Questionable array : NO Score: 2.91 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 12313-10667 **** Predicted by CRISPRDetect 2.4 *** >NZ_JGEQ01000074.1 Bacteroides fragilis str. S36L5 gbfS36L5.contig.73, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ====================================== ================== 12312 35 100.0 35 ................................... ACTAATACAGTCAAAGGCTATGGATTGAAAAAAGT 12242 35 100.0 36 ................................... CGCTTACCGTCTTAGCCAAATGGTTAACCACTTAAC 12171 35 100.0 36 ................................... CGCTTACCGTCTTAGCCAAATGGTTAACCACTTAAC 12100 35 100.0 36 ................................... CGCTTACCGTCTTAGCCAAATGGTTAACCACTTAAC 12029 35 100.0 36 ................................... CGCTTACCGTCTTAGCCAAATGGTTAACCACTTAAC 11958 35 100.0 36 ................................... CGCTTACCGTCTTAGCCAAATGGTTAACCACTTAAC 11887 35 100.0 36 ................................... CGCTTACCGTCTTAGCCAAATGGTTAACCACTTAAC 11816 35 100.0 36 ................................... CGCTTACCGTCTTAGCCAAATGGTTAACCACTTAAC 11745 35 100.0 34 ................................... GCTGTCTTATAGTCCTGTGCAACGAGGATAATTT 11676 35 100.0 35 ................................... ACCGCCGAGGCTGAACGTTTAGAAGACCGCCGTGA 11606 35 100.0 32 ................................... ACAATCGTTGCGGAAGAAATCCAAGACGAACT 11539 35 100.0 37 ................................... ACAATTTTCTAAGGTGGCGGTTACTGAAAGGTATTAC 11467 35 100.0 34 ................................... TTGTAATGTTCTCCTCATGTTCTGGTGAGGAAAT 11398 35 100.0 35 ................................... TTCACTTAAAAACCAAGAATATGGAAATATTTATC 11328 35 100.0 34 ................................... AATTATCGCCGCGCTTTTTATGGTGTGGTCGTGT 11259 35 100.0 38 ................................... AACTTTATAATAGTGATCCTGCAACTTGGACCAAGTTT 11186 35 100.0 36 ................................... CGTTAAGTACCGCAACGCCGCGGTCTTCGCCAAAGT 11115 35 100.0 34 ................................... AACGTACTGGAAAGCTGCCGAAGAACAGATTCGC 11046 35 100.0 34 ................................... AACGTACTGGAAAGCTGCCGAAGAACAGATTCGC 10977 35 100.0 34 ................................... AACGTACTGGAAAGCTGCCGAAGAACAGATTCGC 10908 35 100.0 34 ................................... AACGTACTGGAAAGCTGCCGAAGAACAGATTCGC 10839 35 100.0 34 ................................... AACGTACTGGAAAGCTGCCGAAGAACAGATTCGC 10770 35 100.0 34 ................................... AACGTACTGGAAAGCTGCCGAAGAACAGATTCGC 10701 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ====================================== ================== 24 35 100.0 35 GTCTTAATCCTTATTATACTGGAATACATCTACAT # Left flank : TAATATCCAAAGCATCTACAATGTAACTTACAACACGAACAAGATGGTTGGGAGATATTTTTTCCGATAAACGAACCGGAAAAGAACATTTTGGCTGGAGGTTAACTCTCTAAATACTATCTTAACTATTACTGTTAATTTTTCACAACGGTAATATGAGGCTTTTCACCGAAATAAACAATGGTAAAAGGGGCTATCCGACTTTTGGGGGGCACTTTGCTTTTTGGACAGCCCCGTAGTATTATCGCCTTTGTGTATTTTTGGTAAGCTATTCCACAGCTTATTAAAATAGTTACCAATAAATTAGTTCTGCCTCTCTTCTTCTTTTTCTGCTTATTGATCATTTTCCCAATGTTAAAAGCAATACCGAAGTCCATGACGATCTTATCCAAGCCGTTATGTCTGAACTTCTCCCCTTATTCTATTTAATGTAGTTAAATTTTTATATTGGAATACATCTACATGCTAATAAGGAAAGTTTGCAGTATTTCTGGGCATTG # Right flank : ATATTGATAATCAGATTATTATAAAATATGTATTCTATCTGTATAAATATATAATAACTTATTATTCAGTTAGATAGATGAAGTGTTGAACTGATTTTCGCAAATGTACTCTTTTTTTCTGTAATTTAAATAAATAATTTGTAGAATATAGAGATATTTAATTGATTATCACTTTGATATGATCGATTCATTATTCGCAAATGCCTGCTTCATTTGTTATATTATAGCCTATTTCGAAAATAAGATTAATCTTATATTTATAATTATCAGATAATAAGTGTATTATGTCAAAGAACGAATTGCTTATTTGTTTTTTTTCGCAAATGATTTACTAATATACAAAAAAGCTAGTTCTTTCGTAGCTTTTATACATTATATATTATTTTTCATTTAAAAGAATAAGCAGAAAATCAATGAATTAAACAAATTCTGATTTTCGCAAGAGGTTTAGACTATTTCGACGGTTTTAATTATCTTTTTTCGTATAGGTTGATATATAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCCTTATTATACTGGAATACATCTACAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //