Array 1 32010-31742 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKPC01000010.1 Acinetobacter bereziniae strain TUM15315 sequence010, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 32009 28 100.0 32 ............................ TGAAGCAAAGCAGGCATTCGATGCAATGGGTG 31949 28 100.0 32 ............................ GTTTGAGGAAGCATTCCCAATACCAGCACACT 31889 28 100.0 32 ............................ TTTCAAAGCTAGTGCATTCGCAACTTCACTGG 31829 28 100.0 32 ............................ TCATTGATGTTAAAGAGGGTTACAGTCCAACA 31769 28 92.9 0 ..C..................C...... | ========== ====== ====== ====== ============================ ================================ ================== 5 28 98.6 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACTAGTTTTTATTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGCTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTAATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTGAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGTGAACAATTTAGGGAAATATGCTTTTAATAGAATTACGATTGTTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AATTGTTAAACCTCTCTTATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAAAAAGATCAAAATTAAAAAAATGAATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCAATGACGACGCTAAATATTTCTCAAATTTTTGAAAAATTTTGTTTTTATCAAGAAAAGTACCTTTCTATCCTGCA # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 3505-3892 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKPC01000028.1 Acinetobacter bereziniae strain TUM15315 sequence028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3505 28 96.4 32 ...........T................ AGAAATGGTGCTTCGAGAGGCGATTTGGTGAA 3565 28 100.0 32 ............................ ATCTATGTCCGTATCATCTATAAATGCAAAAT 3625 28 100.0 32 ............................ ACAATCTTTAACAGTTGTAATTTCTACTTTAG 3685 28 100.0 32 ............................ GTCCACCCCCACGGTTCCAACGAGGGAATTGC 3745 28 100.0 32 ............................ TACATATGCTGCTTGGGGCATCAAAAAAGCAT 3805 28 100.0 32 ............................ TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 3865 28 78.6 0 ...........T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 96.4 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : GCTTTAAATGATGCCAAATTTAGTAAACGGATCTCAGATAGACAATTTAATTTAATTCAAACAATTATGTTTGTAACAGGACAAACGAAAAAGTTTTTAAACCAAGCTGAGTTATATCGAATACCACAAATCCAAGTTTTATATACAGGTAAAACAGAACGTACTTTTTATCGTGATATTGCTAGATTGGTTGAGCTAAACTTTTTAGATGATCAAGATGGATTGATTGTTGTTGGCGAGTCAGTTTAAATATGATGAGTTTATAAATTGCTTGGCAATATTTTATAAATTTTTTGCAAATGAAGCAAAAGTAGGAAAATTTGGATTGTATAGATTTTAGTGAAACAGAAGGTAATTCTAAAATTTTACCCCAATATTTTTTAGCTCTTTAACAACTTAATAAAATCAATAAGTTATAATTGTAAGTAGAAACGTGGGTCATTTGATGATTTTAAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : ATATAAACGCCTTAACATCTTCGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAATACAATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACAC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //