Array 1 911028-911239 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJJF01000002.1 Streptomyces sp. MJM8645 8645_contig2_contig000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 911028 29 96.6 32 A............................ TGCCCGGGCCGTCGTCGTTGGCCCTGCCAGTA 911089 29 93.1 32 A...........................G TGAGCGGGCCAAGGCGGCCGAGCTGACGGCGG 911150 29 100.0 32 ............................. GACTTCATGCTCCACATCCAGGCGACCTTCGG 911211 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 97.4 32 GTCGGCCCCGCGCTCGCGGGGATTGCTCC # Left flank : CAGGTGAGCCCCGCTTGACGGACCGCGGCCTCGCCGGCGGCATCGAGATGCTGAAACGCCGGGGTGGCCTTGCCACAGTCATGAATCCCGCACAACCAGGCGAACAGACGCCGCCCCTTACCCGCACCCCCCGCCAGAGCGTCCAGACGCCACCGCGTCACCGGCGGCAGGTAGCGGTCCCAGACAATCTCGGCCACCGCCGCAGTGTCCAGCATGTGCGACAGCAGAAGGTTGGCCGTCCCCCCAGCCCGCCCGGCAGACTTACCCCACAGCGCACCCAGCCACCCCCTGACCTCGGGCGGGTACCACTGCCAACGACCCTCAACCATCGTCTCAACCTCCACGTGCAGATACGCTTCGAGAGCGTAGGACACGGCACTGACAACTCGCCTCGGAGCAAAGAAATATGACGGTCATACATCGAATCCCCTCCGGGCTGCCATCCGATCGAACTGAATCAATCAGGCCCTTCTGCCGCTAATCACCGCAGGTCAGAAAGC # Right flank : CGGCCTCGACCCGCCCACGCTCGACCAGCTCAGCGCGATCGCCCGCGCGATCGGGATCCCGCTCTGGCGCCTGTTCCTCGACGAGTAGCACTGGCCGGCCGCACCACCGTACGGCCGACCGGGGAGTCACTTCTCGGGGTTCGGCGGCGGGTCGGCCGGCGGCGGCGGGGTCTTCGGTGCCGCCGGCGGTGCCTTCGGGCCACCGATTCCGCCCGAACCGCCACTGGGGTCCTTCTGCGGGGTCATGTCGTCCTCCTCGATCTCCTCGTCCGCCGGGATCGGGATCTCGCCCGGCGGCGGCATCAGGGGGTGCCGCCCGCGGTTTGGGCCCGCGGTCTCACGGCGGCCCCGACTCCAAGCACCCTGGCGTTTAGGGGGGATGGTGGCGCTCATGGTGTCCTCTCTGTGACTGTCCTGCCGGGTCACCCATGATGGGGCCTCAGCCCCACCCGTTGCCGAACGTCCCCACCGGATGGCCGAGGTCCGCACACGGCGCACAG # Questionable array : NO Score: 5.73 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCTCGCGGGGATTGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCTCGCGGGGGTTGCTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 912797-912947 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJJF01000002.1 Streptomyces sp. MJM8645 8645_contig2_contig000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 912797 29 100.0 32 ............................. GGTGCTGGCGAGCTGCTGGGCGAGCGCGGTCT 912858 29 100.0 32 ............................. GCCACCAGGTCCGCGACGATGCCCACCTGGAC 912919 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 ATCGGCCCCGCGCTCGCGGGGGTTGTTCC # Left flank : ACAGCCGATCGGCCAGGCTCGCCCGGGACTTGAAGTCGACCCGCCACTCGGCGGAGTCCTGCACCGCACCGTCCCACCAGTAGACGGACTGGACACGGTAGACCTGCGCACACGCGGCCAAGCGGTCACGGATCACCGCCGAAGCGAGCTCACGGGCCTTCGTCTCGTCGTCATGGGTCGTCGTCACCACAACGAAGTCACTGGTCGTCATACCGTGACGGTACCCGGCATCAACCGCCGCCCCCACTCTGCCCGACGGACCTACCCCACAGCACGCCCAGCCAGCCCCTGACCTCGGGCGGATGCTGCTGCCAACGGTCCTCAACCATCGTCTCAACCTCCACCTGCGAGTACGCTTCGAGAACGTAGGCCACGGCACTAACAACCAGCCCTGGGGCAAGGAGAGATGGCAACAACGCATCGACTGTTCGACGGGCCCTCTACCAATCGAACTGAATCAATCAGGCCCCTCGCCCGCTAATCACCGCAGGTCAGAAAGC # Right flank : CGCGGCCTCCCACTCAGACGACCACAGCAGTTCGCGGTGCTCACTCCTTCGCCCGATGATGCTGGCCCGACGAGACGACAAAATAGGCGTGGACGCGTCAAACTGTTCGCGAATTGAGTCGCTGAATTCAACAGGTTCCCTGCGGAACTGGGCGTACGAGTCGCCAAAGGAGACCGCCGGCCGTGAGCCCGGCCGCGGTCCAGGGCCGTCCTGCCTAGCACGCCGAGCCAGCGCCGAGGTCTAGGAGAGAACAGCTGGCTCTCCCTCAGTGCCGCCCAGACTGCTGCGGGCACGGGATTTTTCCGAGGGTGGTTGATTTCTTTCAGGACCATCTTCGCGGCTTATTCTCCCTGGTCGGCCGCAGATCGCAATAACAGCACGGGAGTTAGACGCCTATGGGCGCTAACCACGTCGAGCGTGACCGAGTTCAAGGTCTTCCAGGCTTGGGAAGCCTTCGCTGAGAACGGTTCCGGACCCTCGATCCGCACCAGAGCCAGAGC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGGCCCCGCGCTCGCGGGGGTTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCTCGCGGGGGTTGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 926817-927026 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJJF01000002.1 Streptomyces sp. MJM8645 8645_contig2_contig000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 926817 29 96.6 32 ..............T.............. GGTTGCGGACAGTGACGACCGTCGACTGTGTG 926878 27 89.7 32 ....................--......T GAGAAAAGTGGTGCGGCTTGCAGATTCACCGA 926937 29 100.0 32 ............................. GACGGCGAAAGCTGGAGCGCGCCCCTCGTCCT 926998 29 89.7 0 ..T......................T..C | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.0 32 ATCGGCCCCGCGCTCGCGGGGGTTGCTCG # Left flank : GGCGGTGCAGCATCAACGTGCCCCACGTCTGCTCGACCACCCACCGCTTCGGCTCGGGCGTGAACCCTCGTGTGCCGGGCTCGCGCTGGACGACCTCGACATCGATGCCCAGGCGGGCGCCGTGCTCGACGACGGCGTTCTTGAATCCGGCGTCGACCCATGCCTTGGCAGGTCGTGCGGCAAGTACCGCCACTGGCAGCCGGTGCGAGCCTGGTAAAAGATCGCGTTCACGATCTCCCGCATGTCGTAGGCGCCCTGGTGGCCGCTGACCGAGGTGTGCCGGCCCTTCCAGGAGACGATGACCGGCCCGATCAGCTCCCAGGCCTCATCCGACAGGTCGCTCGGGTACGGAGCGCGTCCACTCACGCCCACCAGCGGACCGCATTTCCGGCCGGTCGGGAAGCCCTAAAACCGGACAACCCGCCTTCAAGCACGACGAGACCCACCGACACTCGCAGAACGCCCTCTCACAAGCTCAGCAAGACGAAGCTCCGCGCCAT # Right flank : CACTCTGTTCACGGTCGGCGTCCGTGTGGGAGCGGCGACCTCCCGGTGATGTCCCTTGCTGTCGCCGAGAGCGGTGGCTGGTGAGCTCTTGCCGCCGGTCGTGGGAGGGCTTCAGGTCGTTGCGCGCCTTCGAGGTCCGCTTGGTGCTCTTGGCCTCGTGCGGGCGCTTGTGGGCCTGCGTCCGCCTGGCCGTGTCGGTGCCGACGGCTTGGGGATTGCGGGCGGTTCGGGGAAGACCGCGAGCCCTGCCGCGCCCCGCGCAGCGGAGACCGGGGCGGCGCCGTAACAGCGGGCCCGGGCCGCAGCGCGTACCCGGTCTACGCCTGGCGAGCGCCCACGCCGCACGCGTACGGTGCCCGGCTGGCGGCCGCGTGGCGGAGGAGGGTGAGGGCCTGTTCGGAGGGGGAGTTGGCGGGGGTGGTGCAGACGATGAGCGCCTGGTCTGGTGAGCGGGCGATGGACAGGGTCTGCTGGGTCACCGTGACCGTGCCGACGACGGG # Questionable array : NO Score: 3.75 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGGCCCCGCGCTCGCGGGGGTTGCTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCTCGCGGGGGTTGCTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [2-2] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [38.3-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 762094-762488 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJJF01000001.1 Streptomyces sp. MJM8645 8645_contig1_contig000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 762094 29 100.0 32 ............................. GCGGCGAGCGGATCGAGGTGGCCCCCGCCGTC 762155 29 100.0 32 ............................. ACGATCGGTACCCGCCTCGGCGCGCTGGAGCA 762216 29 89.7 32 G......................C....T CAGGCTTCCGCGTTCCGGCCGCGCTCGCTGCC 762277 29 82.8 32 ...........A.C.A.A.....C..... CGGGCAGCCCGGTGCAGCTCCGTCGACGCTTG 762338 29 86.2 32 .....T.T........T......C..... CGTGGCCACCTCGACGTCGATCCCGGTCTCCT 762399 29 96.6 32 ......A...................... TCCGCCGGCCGGTATCGGGCTTTGCGCTCCTT 762460 29 93.1 0 .............C.........C..... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 92.6 32 ATCGGCCCCGCGCTCGCGGGGATTGCTCC # Left flank : CGAGTTCGCCGAACCGTCTACCAACGCCCCGCAATCGTCACCTGCACCACCGACCGGAACGGCCTCCAGGACAGCGGACAACACCCCAGAACGCGGCACCGGGACGACGAGCGGCAAGCTGGCGGGCGGGAGGCTGCCGACGGACCTGCCGCTCGGCACCGCACCTCGACCCGAGCGAGAGCATCCAGACCCCCCGGCATCACCGGCGGCAGGAAGCGATCCCAAACGACCTCCGCCACCACCACGGCACACAGCATTTGCGACAACAGCACGTCACCCCCGCCCACCCAGCCACCTCCTGACCTCGGGCAGATACCAACGCCAACCGTCCCCAAGCACCGCCCCGGACCTTCCCGCACGAGTACGCTTCGGGAGCGCACGACACAGCTGACAACTCTCCCCACGTGCACGAAGAAGCATGAACTCCTTCACAGACCGCCTGCCTAATCGAACTGAATCAACTGACGGCACCTGACACGAATCACCGCAGGTCAGGAAGT # Right flank : CGCCCCCGCTCGGCTTCGGCCGGGCGGGGGCGCTTCGTCGTTACGGGGTGTCGTGCGTCCACCGCCACACGCTGTCCGCGTCCGGCTCGTACCAGGACCGTCCGTCGGCGTACCGGCCATGCCGCCATCGTGCGACCGGCATCGGACCATGCAGGTCAGGAACGTGGGGCGCGCCCGTACTCAGCAACCCAGCGCGAGGTGAGCACGATGTCTGCGGTCTCAACTGGGCGCCCGGTGGCCTGGTCGTAGTAGGTCCGTTCAATTGCCATCACCGGGACAGCGGGTGCAACACCGAGGGTCTGAGCCTCAGGTCGCGTGGCAGCCCTGGCACTCACGCGCTCAACGGGCACGCCCACGTCGATGCCGATGATCGCCATGCGGTCGGCGACGCCGATACCAGCGTGTGGACCGGCCTCGGGCAGGACGATCAAGCTGCCGCCAGTGGTGGCCATCGGTTCCCAGCTCTCTGCGAGCTGCACCGGGTCTCCGTCGGCCAGGTA # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.63, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGGCCCCGCGCTCGCGGGGATTGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCTCGCGGGGGTTGCTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 765516-765726 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJJF01000001.1 Streptomyces sp. MJM8645 8645_contig1_contig000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 765516 28 100.0 33 ............................ CTGCCGGTGGCCTTGGGCACCGAGCCCATGCCC 765577 28 100.0 33 ............................ CTGCACCGAGCCGGTGCTGATCGGCAACCAGGT 765638 28 100.0 33 ............................ CTCATCCCAAGAGGCAAGCGTGTCCAACTGGCC 765699 28 89.3 0 T......................G.T.. | ========== ====== ====== ====== ============================ ================================= ================== 4 28 97.3 33 ATCGGCCCCGCGCTCGCGGGGATCGCTC # Left flank : TGAACTCCTTCACACGCCGCCTGCCCAATCGAACTGAATCTACTGACGGTCCCTGACACGAATCGCCGCAGGTCAGGAAGTGTCGGCCCCGCGCTCGCGGGGATTGCTCCAAGCGGTACTTCGCCTGGGCGATGCGCGCCAGGTCGGCCCCGCGCTCGCGGGGATTGCTCCGCGGGACACATTGCCATCGCCGAACTCACGCTGTTGGCCCAACACTTGCGGGGACTGTCCCGTGGCAGATCCCCAGCCCGCCCGACGGACTTACCCCACAGCGCACCCAGCCAGCCCCTGACCTCGGGCAGGTACCGCTGCCAGCGGTCCTCAATCATCGTCTCAACCTCCACGTGCGGGTACGCTTCGGAGAGTCAGGCCACGACACTGACAACCAGCCCTGGGGCAAGGAGAGATGGCAACAACGCATCGACTGTTCGACGGGACTTCTACCGATCGAACTGAATCAATCAAGCCCCTCAGCCGCTAATCACCGCAGGTCAGAAAGT # Right flank : CAGGAGACCAGCCCGTCGCACCGGTGGACCACTGGGAGCTGGTCTCGTCGAGGGTGCGAGCAAGGCGGACACGAGCCCGCCAGGGCTGGTCGAAGACGTGTCCAACCGCCTTCGACCGGCACGCGAACCCGCGCCACTGGCAACACACCACGGTGCTGCCCGACGCCCGCCGCGACGCCTTCGAGTTCGCCGGCACCGTCTGCCAACGCCCCGCAATCGACACCTGCACCACCCACCGGAACGGCCTCCAGGACAGCGGACAACACCCCTGAACCCGGCACCGGGACGACGAGCGGCAAGCTGGCGAGCAGGAGGCTGCTGGCGGTCCTGCCGCTCGGCACCGTGCCTCGGGCCCGAGCGAGAGCATCCAGACGCCCCGACGTCACCAGCGGCAGGAACCGATCCCAAACAACCTCAGCCACCACCACGGCACACAGCATTTGCGGCAGCAACACGTCACCCCCGCCCATCCAGCCACCTCCTGACCTCGGGCTGATACC # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGGCCCCGCGCTCGCGGGGATCGCTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 766408-766619 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJJF01000001.1 Streptomyces sp. MJM8645 8645_contig1_contig000001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 766408 29 93.1 33 A..........A................. CGCGCCCGCCACGTGTACGACCTGGTCTTCTTG 766470 29 100.0 32 ............................. GCCCAGTAGGGGACGTGGTCGGGGTCCACGTT 766531 29 100.0 32 ............................. CGGTCCTTGCCTTTTGACCGGATGACGCTGAT 766592 28 82.8 0 A....-......G...T........T... | ========== ====== ====== ====== ============================= ================================= ================== 4 29 94.0 33 GTCGGCCCCGCGCTCGCGGGGATTGCTCC # Left flank : GAGTTCGCCGGCACCGTCTGCCAACGCCCCGCAATCGACACCTGCACCACCCACCGGAACGGCCTCCAGGACAGCGGACAACACCCCTGAACCCGGCACCGGGACGACGAGCGGCAAGCTGGCGAGCAGGAGGCTGCTGGCGGTCCTGCCGCTCGGCACCGTGCCTCGGGCCCGAGCGAGAGCATCCAGACGCCCCGACGTCACCAGCGGCAGGAACCGATCCCAAACAACCTCAGCCACCACCACGGCACACAGCATTTGCGGCAGCAACACGTCACCCCCGCCCATCCAGCCACCTCCTGACCTCGGGCTGATACCAACGCCAACCGTCCCCAAGCACCGCCCCGAACCTTCCCGCACGAGTACGCTTCGGGAGCGCACGACACAGCTGACAACTCCCCCACCCGCAAGAAGAAGCATGAACTCCTTCACAAACCGCCTGCCTAATCGAACTGAATCAACTGACGGCACCTGACACGAATCACCACAGGTCAGGAAGT # Right flank : CGGGGCGACGGCCCAGGAGGAGAATCAGGCCTTTCGGCCTCGTGCCTCCGGGCGGGGGTTGCCGGCATCAGGGGGATCTTGGTCGGCTTGCTGCCTGGGCGACGGCTCCCAGTCCTCCCAGTAGTCGAGGGGGATGCCGTCGTCGGTGGAGGCCAGGACTTTGTGGTGCTGCTCCTTCGTCCCGTGTGCCACGTTCGCGTGGTCCTTGGTAGACGGGAACGCCCGGTTGACCTTGGGGCATGCCGTCTATCCCGCTGGTTCTGGTGCCCGGTCAGTCACGGGACCGGATCCGGGCTCATGGCGTGATTTCTGGGGAGACATCCGGGTCTTCGGAAACCGTCATGGTGCCCACACGGGCTCAATCGAACGCGTGCTTCTTTCTCCTTCGGAAAGGTGTCGACCTCCAGGTCGGGGTACGACACCCTCGTCGCCGGCGTAGTCAACTGCCTTGCAGGCGAAACCATTTGGGACCACCGGCCGACAGCAGCCGGGCTGCCGGC # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGGCCCCGCGCTCGCGGGGATTGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCGCTCGCGGGGGTTGCTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //