Array 1 2629383-2627474 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034683.1 Rheinheimera mangrovi strain LHK132 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ====================================== ================== 2629382 31 100.0 35 ............................... ATGCTCTGTTACCTATGGGGGTTACATTACTCAGT 2629316 31 100.0 35 ............................... GGACAGCAGCCGTGTTAACAGCGTAGGGTCCTCGT 2629250 31 100.0 36 ............................... GCTAAGTTCTGGAAACTCCCCGAACTTATCCAGAGT 2629183 31 100.0 37 ............................... CTATTAAGGGTTATTAAGCCGCTATGAAGCGGCCCGT 2629115 31 100.0 36 ............................... AGTGGATTGGCATGGATTACGAGACTGAAGAATCGT 2629048 31 100.0 36 ............................... CTTTCGGTGTAACAGCGGTTAGCGATGCTAAATCGT 2628981 31 100.0 35 ............................... ACTTACTCCATCAAAGTACAACTCAGAAATAGCGT 2628915 31 100.0 36 ............................... AGTTCCAGCGCATTCACAACGGCCGTCATAAAATGT 2628848 31 100.0 37 ............................... GTTGAGCTATCTGCAATGCTGGTGGCTCACGAGTCGT 2628780 31 100.0 35 ............................... GTTTATATCCGATCCAGCCCAATACGTTGAAATGT 2628714 31 100.0 36 ............................... TTCACTGTGGTGAAATTAAAATTAACAACAGCATGT 2628647 31 100.0 36 ............................... CAGTAATGCGGCGTATTTTCTCAAGCTTGCTTTGGT 2628580 31 100.0 36 ............................... AGATGTTAGCTCTGACGCCGCAGGACGTCTTACAGT 2628513 31 100.0 35 ............................... ACAGTGTCGCTTACGCCAATAAAAACAAATGGCGT 2628447 31 100.0 36 ............................... TGAACTAAATCCTTGTGCGCCTCACGCGCAAAATGT 2628380 31 100.0 35 ............................... GCGCACCAATTCGCGCATATCAGGCTCTAAAGTGT 2628314 31 100.0 36 ............................... CATTGTTTTATCCTGAGCGAACCCGTCGAGCGTCGT 2628247 31 100.0 36 ............................... GTGAAGGAACAGCCGTACCGCTATAACGGTCAGGGT 2628180 31 100.0 37 ............................... GACGATTTATGGTCATGTAATGCCGATGCACTGGCGT 2628112 31 100.0 37 ............................... TCCATTAGCCCCTTCCCGCAAGTTGGTACAGTGAAGT 2628044 31 100.0 37 ............................... TTTGCCCGAAGTGCGCCAAGGTTTACCAGTACATCGT 2627976 31 100.0 36 ............................... GGACAGACTAATCAGGAAAAGGCTAACAAGAAAGGT 2627909 31 100.0 36 ............................... CACAGCAACGCCTGCGAGCTGAAAATAAGCATTAGT 2627842 31 100.0 36 ............................... TGTGATCGTCGTGTCCCATGCGGCCAAAGGCTTGGT 2627775 31 100.0 36 ............................... GACAGAAGCGCTGGCCGCTTTAGTTGCTGGAAAGGT 2627708 31 100.0 36 ............................... AATCGGGTAGCTACCATCGGGTATTTCCACAACGGT 2627641 31 100.0 38 ............................... CTCCAAAACGGAATCTGAACCAGTTATTTAGCCATCGT 2627572 31 100.0 37 ............................... AGGTCAGGTGAGAAACAAAGGCTCTGTGGTGACAGGT 2627504 31 90.3 0 .........................C...CG | ========== ====== ====== ====== =============================== ====================================== ================== 29 31 99.7 36 CGCGTCCCGCACGGGGCGCGTGGATTGAAAC # Left flank : AAGTAAATTTGCGAGGGCAATACGCATGATGGTGTTAATTACTTATGATGTTTCTTTTGATAACGAAGGTGGGCAGCGCAGGCTCAGGCACATCGCAAAAATTTGCCAGAACTACGGCACAAGAGTGCAGTATTCAGTGTTTGAGTGCGATATAGACCCATCACAATGGGTGGCATTAAAGTCAAAGCTGTTATCAACCTACGATGACAGTGTCGACAGCTTACGTTTTTACATTCTGGGTAAAAACTGGCGGAGCAAAGTCGAACATCATGGTGCAAAAGCCACGCTGGATTTGTTTGCTGATCCCCTCATTATTTAGTTAAACGCTAACTTGTAGTGCTCTTTAAAAAGCCGGAACATTAGCGGCATCCTTAGTTACTGATTTTAAAGTAATTAAGATGTCCCATTCCTCTTATTCATGTATTTTTTTCATATTGATCTGACGTTAGCGCAAATTGCACATAACGGTTAGACTATGCGTGCCTTTGCAAAAAGGCGGT # Right flank : AGGCAGTTGTCATTGCCAAGTATCTGCAGGTCGCGCTGCATCCTGAAAGGAGCTTATCGATTGATGTCTGTAACATTATTTCAGTATTCAAACTAGCTAATTGTTACAAAGATAGCCTGAATATTTGATGTTAAGTATTTTGCAGTAGCAGGATTGAAAGTTTTGATTTATTGACTTTGCTAAGTTAAGGCTGAACTTCTTATTGATGTTAATGATGGCGAATTCGCCATAATTAAAAGTCAGGGATCGTGTGGTGGTTGTATGCTACCTGTAATTTATCTGTTCATTTTGTTTAACAGGTTGGTCTGCTTTTTCTCGAAAATTTCGTTGTTAATGCGGTGTAGGAGCCGCATTGAAATCGGCTTTGGCTGATTCTAGATCATTGGTGTAATGCCGTCGGTGATTGCACCCTACATGATGGTTGTTTTCTTATTTAAAATGTACTGACTGGAATTAAATAGGGAATTGATGCCTTTTTGCAATCAGTTCCCTTTCTATCC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGTCCCGCACGGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.60,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //