Array 1 119328-121082 **** Predicted by CRISPRDetect 2.4 *** >NZ_QLPW01000035.1 Streptococcus iniae strain QMA0463 NODE_1_length_244491_cov_115.812, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 119328 36 100.0 30 .................................... TGTCAATGGTGTTAATTTCACAGGTCTTTA 119394 36 100.0 30 .................................... ACTTGACATGAACAAAACACTTACAACAGT 119460 36 100.0 30 .................................... TGGCGCAGAATAGATTGCACCGCCAACTTT 119526 36 100.0 30 .................................... GCTACGTTTTTTTGAGCATTATTAAACCCT 119592 36 100.0 30 .................................... TTTATACGTGACGGAGTGTGCAACTCCATC 119658 36 100.0 30 .................................... CACCCCAGTTGTTATCAACACGAGCTACGT 119724 36 100.0 30 .................................... AATATATGACGGAGATAACTTTATCGACTT 119790 36 100.0 31 .................................... CATGGATGCCAGAATTTTAAATTGGTATAGT 119857 36 100.0 30 .................................... TACCAAAGGTACAGCAAGACCAGTTGCTGA 119923 36 100.0 31 .................................... CGCTGATAGCTCCGCTAATACCTTTAGCAGA 119990 36 100.0 31 .................................... TAGGGACTAGCGGTTATATGCAAATAATGTT 120057 36 100.0 30 .................................... ACAAATCATAGCCATTTGCTAACATTGCTC 120123 36 100.0 30 .................................... CGAAAGGTACTATAACCGATGAAGATATTA 120189 36 100.0 30 .................................... GGTCAGATACGCTCAAGGTCAAACAATTGT 120255 36 100.0 30 .................................... GCACTAGCAACAGACCAAGACTCGCACGGA 120321 36 100.0 30 .................................... TTTAGAGAGATAGCTTTGTTTTGTATCTTC 120387 36 100.0 30 .................................... GTTTGATGATGTTGTCTATACAAATACTGA 120453 36 100.0 30 .................................... TTTGATACGATCTATGTCAGCGAGCATTTG 120519 36 100.0 30 .................................... GTTTTAGCTTTTTTAAATTCTTCTTGCTTC 120585 36 100.0 30 .................................... GTGGCATTTTTGGAAATAGTTAGACAATTA 120651 36 100.0 30 .................................... AGGTGTCAAACTTATCACAGCTCTTGTTCA 120717 36 100.0 30 .................................... ACAATTATTTTATGTCAGATATTGATGAAT 120783 36 100.0 30 .................................... TTAATTCCTTGGTTGTCAGTGTAATAGATA 120849 36 100.0 30 .................................... CGGTTTAGCTGCTCTTGAGAAGATTGTATT 120915 36 100.0 30 .................................... TTAGTATTAAATATAATATCAACACCTTTA 120981 36 100.0 30 .................................... TACAACAGTACCTATAAGTGTGGCTACACC 121047 36 75.0 0 ................T.....TG..T.T.TTT..G | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.1 30 GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC # Left flank : AACCAGAAGTAAAATCAATGATCGAAAAACTTGCTGCAACTATTACCGAATTAATTGCTTATGAATGTTTAGAAAATGAGTTGGATTTAGAATACGATGAAATCACAGTTTTAGAGCTAATTAAGGCCTTAGGTGTAAAAATTGAAACTCAAAGCGATACGTTTTTTGAAAAATGTCTGGAAATCGTACAAATATTTAAATATTTAACTAAAAAGAAGTTACTAGTTTTTATTAATAGTGGAGCATACTTTACTAGAGATGAATTTGAGAAACTGTTAGAATATATTAGTTTGTCTAGTCAACCAGTCTTATTTTTGGAACCAAGAAAGATGTATGATTTTCCTCAATATGTTTTAGATGAAGATCTTTTTATGCTAACTGAAAATATGGTATAATAGTATTAAGAAAGACAATAGTAATTAAAAGGATCATCAAGATAGAAGTCTAGCTGAGACAAATAGTGCGATTACGAAATTTTGTAGAAAAAATTTAGCTACGAG # Right flank : GGCAATATTTCCCATTTGAATAACTTACACATTCGGAAACCGCTTTCAAAAATAGTTTTTTTATGCTATACTGATAAAAAAGCTAAGTGAGGGCATTATGGAAAAAACCTTTTTTATGATTAAACCAGATGGTGTTAAGCGGGGGCTGATTGGTCAGGTTCTTGAACGTATTGAGCGTAGGGGTTTTGTGATTGAGAAGTTGGAATTGCGTCAGGCTGATGCAGCAATTCTGAGAAAACATTATGATTTTCTGGTTGATAAACCGTTTTTTCCAGAGATTGAGGCTTACATGACAAGTGGTCCTCTGTTGATTGGTGTTTTGTCAGGCAATCGTGTGGTCTCTTCCTGGCGTATGATGATGGGGGTTACAAATCCTAAAGATGCCCTGCCAGGAACAATTAGAGGAGATTTTGGGCAAGCGCCAGGAGACGATGGTGGCATTCAAAATGTGGTGCACGGTTCAGATTCTATCGACGCTGCAAGACGTGAAATTGATATCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //