Array 1 161807-163396 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTJM01000033.1 Paenibacillus peoriae strain IBSD35 352, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================== ================== 161807 32 100.0 34 ................................ CCCCGAACCCTGGAACGATCCGCAATGTCTGGAT 161873 32 100.0 40 ................................ TCCGATGTCGCATATCGGTTAAGCAGCGAGGGTTGTCGAA 161945 32 100.0 36 ................................ CGTCATTTTGCGCGAATCGCTAGAAGCCAAACGGAT 162013 32 100.0 37 ................................ CACCACGGAATTACACGCCGCCAGCTTTGGAATCCGT 162082 32 100.0 36 ................................ TTTTGTGGTTAGCAGATGGTTAGCAGATGGTTGGCA 162150 32 100.0 36 ................................ TTTCATCAGCGGCTTTTGGTCAGGACCCGTAATGTG 162218 32 100.0 34 ................................ CTGTACACGCCGTTTAATTACGTCCATAGGCTCC 162284 32 100.0 37 ................................ ACATAACCCGTTGTTGCTACCTGAGTATTATTGGTTG 162353 32 100.0 36 ................................ ATACCATCGCTCCTTTTTTTTTATTTTTTGTTAATC 162421 32 100.0 35 ................................ TGCCTGGAACCGACGCAAGAGCGTGTCCGAGTGGA 162488 32 100.0 33 ................................ CCTCTCTGCTACCTGCTGCTGGAGTGAGTCTAT 162553 32 100.0 36 ................................ TAATCGTCTTGCTGTCCTGGTAAAGCGTGTAACCAG 162621 32 100.0 32 ................................ ACAGTGTGATCCATGTGAGAACATAAAAAAAG 162685 32 100.0 35 ................................ GGTTGAGGTATCTTTCTACCCGCCTCGTCAAACAC 162752 32 100.0 38 ................................ CATACCGGGTGAGCACGGAACAAGCCACCTTAGCGACG 162822 32 100.0 35 ................................ TATATCGAATTTTTGTTCGCTTTTTTTTCGTCTTG 162889 32 100.0 36 ................................ TGATGAGGATTGGGAAAAGCTTAAACAAAGCCGGGA 162957 32 96.9 36 ............G................... AATAAAGCTCATAGCTGACTTGTGACATTGTTCGTA 163025 32 96.9 34 ............G................... AACATGTCTGTGTGGGTCGATGAAGGCGACTATA 163091 32 100.0 34 ................................ TCAAAGGGTGCTGAGAATGTCAAATATTAAAGCA 163157 32 100.0 37 ................................ TTTTTGCCCTCCTTTTATAACTCTATTTATTTCCGTT 163226 32 93.8 35 ............G...............G... TTCTGTTCCTTGAAAAGCGAGATTGATAGAGTTGT 163293 32 87.5 40 ................A...A.AT........ CGTCCAAAACAAGAGATAACCAGAGCAGAATCTGCGGTCG 163365 32 75.0 0 ...AT.....G...T..A.T.......A.T.. | ========== ====== ====== ====== ================================ ======================================== ================== 24 32 97.9 36 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GTTTCGTATTCGTGTCAATGTCATCTATCCGGGTGCCATTTCGACGAATATTGATGAAACCACGGAGAAATCGGAAGGGTTAAAGCAAATTACCATCCCCGTCAAGTTTCCCGAAGGAGGACAACCGTTGGCAGATGGACCGGGTCAACCCGAGCAGGTAGCTGATTTGGTGACATTTTTGGCCTCAGATCATTCGCGTCACATTACTGGCGCACAAATTGTCATTGATGGAGCAGAGTCGTTATTGTTTTAGAAAATAGAGCATTCTCTGGGATAGAGAAATGTTTTGTGATATCCTGAGTGCATTGTCTTGGTTACGGTGCGAATGTGAAGCTCACATAAAAACCCTTGGATCCTTCGCACCTCGAAATTTGTCGAAATGGATTCGGATTAGCTTTCTTCGTTAGAAGTCAATAGTCGATTCAAGCTTTTTTAGCATCGTTTTTTTCGAAAATGTATGGAATTGATATCATTAGGGTATGAATTCCTTCATTTTCGCT # Right flank : TATATAAAGTCCGCTCAGTGAGGTTCAAACAGAAGAAACGGGCAGCATTCAAATAGAATCTTCAGGAAGCTCAAGATAACAGCGAGGGAAACTCGCGTCTTACATTTAAATTCTATCCTGTAGATATTATGAATCCTCAGAGGAAAGACTCTGGGGATTTTTAATTTTTGTAGAGGACGAATAAAAGAGCGGTACATGCTCCTTCTCTATGAATAGTACCGCGCTGCTACAAGTTTTTTTATGTTAGTCAATTTATCTGTTAATTTGATTTTTTTAGGAGGTATTTGTCATTGGAAGTCGAAATAAGGTAAAAGTAAATAAGTCTTTATTCCTTTTTTGTTATTTTGTTAGTAAATAAGACTTGGTTCAGGAGGCACTTTAAATGAAATATATAGCTCACATTCGTCAGAAAGACGGACGTATTCAGACAGTGAGAGATCATCTACAGGAAGTGAAAGAGAGTTGTGAGCATTATGGAGGGAAAATTGGTGTCGGTCATT # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 172070-172717 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTJM01000033.1 Paenibacillus peoriae strain IBSD35 352, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 172070 33 100.0 35 ................................. ATTAGCTTGCTGAACAAGGTCGCCAGCATTTGATA 172138 33 100.0 36 ................................. AGCAGACCCCCAGGATAAGCACCAGCAGCAGGCACG 172207 33 100.0 37 ................................. ACGAGGGCCTGCTTTCCTATTGCCATTTTACTTTTGA 172277 33 100.0 34 ................................. ACATCATAAATTGCTTTCTGGAAGGGAGGTGAAA 172344 33 100.0 36 ................................. AGATCCACGAGGAACGTCCTGACCTGTCTATTGAAC 172413 33 100.0 36 ................................. CACCACGGAATTACACGCCGCCAGCTTTGGAATCCG 172482 33 100.0 34 ................................. TTCAATTTTTTGAGAGGCAGTCTTCCCCAATTTG 172549 33 100.0 36 ................................. TAATAAAGTCCCAAATACTCCATAGAACAAAAACGG 172618 33 100.0 35 ................................. TCTTGATCTGGTTCGGGGTAGCTTGGGGAGTCATT 172686 32 93.9 0 ..........A...-.................. | ========== ====== ====== ====== ================================= ===================================== ================== 10 33 99.4 36 GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Left flank : TCCATTTTTGTGGAAGTAGGTGTGAACACTTGCTCATTTTGATCACGTATGATGTAAGTACAGTAGACAGAGAAGGTAGAAAAAGACTGGCAAAGGTTGCGAAAAAGTGCGTAGATCACGGACAAAGGGTGCAAAATTCTGTGTTTGAATGTATTTTGGACTCGACCCAGTTCCGCAGCTTAAAGTATGAACTCGAAGAATTAATAGACCCAAAAGAAGACAGCTTGCGCTTCTACAACTTAGGAGATAACTACAAGAAGAAAGTAGAGCATATAGGGGCAAAGGAAGCTTACGATATGGAAAGCCCACTAATTTTATAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAAAGCATTAGAATGCTGTCTATGAGAAAAAGTCAATAGTTGATACAAGCCTTTTTGGCATCAGTTTTTGCGACAATGTGTGGAATTGATATCATTAGGGTATGAATTACTGCATTTTCGCT # Right flank : TTTCACAAGTACACGCTCCCATCGAAATGAATAGAAGACACGTTGCGGAATTGAATCGCACAAGGGTTCTGACCAGGCTGTTATTGTTTCCGTTGATTGACTGGTTCCTTGCCGTCTGCCCGTGCCATAAAGCCCCGGAATAACTCGGGAAGTGCCTCTGGATATTGCTGAATTACAGGAGCTCTGCTGCGATCTGTTTGAGCACTGGCGGTGTTGGGATGAGTTGGCCGTCACCTTTGTTGCCCTTGATGTAGGCTTTATCCTCGTAGGCATAATATACATCGCCTTGGCCCTCAACGACCGGGTAGCCGCTCTCATCATCAGTTAAAGATGTTAGCACGTGATTGCCATGTTGTGCGGCGTGCTCCTCATCATGCAAGCGCAGGATGCCGTCCTTACTTAAAAATGCGAAACGTGGTTGTGTAGTAGACACAATCATGTCCTCCTGAAATGATTTTTTTGAGAAATCAAAAAGGCCGACACATTGGCCGACCTGATTC # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.80,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 3 179205-179488 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTJM01000033.1 Paenibacillus peoriae strain IBSD35 352, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 179205 32 100.0 35 ................................ TGCTTGCTGCTTGAGAGATAAGATATTATCTACAA 179272 32 100.0 34 ................................ CATTTGCACTTGTCTGGTGTTCACCACATTCAAT 179338 32 100.0 18 ................................ CTTTAATACGCCTATCTG 179388 32 75.0 34 CATTATG..A...................... CAAGTGTTTGGTTTGATAATGGCGCCCTCTTCAT A [179390] 179455 32 90.6 0 .............................CGG | CA [179481] ========== ====== ====== ====== ================================ =================================== ================== 5 32 93.1 30 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : AATGCAGCCGGTATGATGAACAGGGTTAATAACTCAACTTTTGCCGAACGTTTTCATAAAATATTTTACAAATACCTTTATGATTTTCGAAAATATAAAGGTATTTTTCTGATCAATGTAGTCGATATTTCCGGATGTATTTACCCAAAGCCAGAACGTTCAGCTTTGGTGTTAACTGGTGGGACCCTGCTTTTAAATGAGCTATCGATGAATTAAATATATTCGAATGTGCGCTTACTCCTTCACAGGTGGCAGAACTGGCAGAGGTGAAATAAGTCCAGGCAGGTATTTGTTGCTAAGCCAAAAAGCGAGTCTGTCCAGGTGCGAATGTGAAGCTCACATGAATTCTCCGAGAGATTCGTACCTCAGATTTTGTCGAATTACATCGAATGTGAACAAGTTTTAAACGATCGCAAGAGGATAAGGTAATATTAGATGCGTTTTTGCCAAAATAACGCTAGAATGTTACTTAAATAGGGGGCATTTGACCCATTTTCGCT # Right flank : GAGCAGCCGCCACTTGGTCGTACGAGTGGAGAGCGCCTCTTTATCCGAAATCATGAAGAGGTCCGTGAAGTGAGGAGCTGGAGATTTTACGCGGTTTGGAGGGACGGCGGTGGTTCAGTACAATTCCGTGTGGGATGAGCTGATCTTGCTGCAAAAAGATGATTTTACTTTCATGGACGCCATAAGCGCCCGCCGTTAGATAACGTGAATGCCCTATTATCTTTTGCCTATACACTGTTGTCCAACGATATGAAATCCGCACTGGAAGCTGTCGGTCTGGATGCTTATTTAGGTTTTCTGCATAGAAGAATCGTCCAGGGCGAGCCTCATTGGCACTGGATGTGATGGAAGAGCTTAGAGGAGTATATCCCGACCGTTTTGTTCTTACATTATTAACAAAAAATGATTCATGGCAAAGGATTTTACAAAAAGAAAACGAGGCTGTTATGATGGACGATGATACAAGGAAAATCGTATTGAAGCCATGGCAAGAACGGAAA # Questionable array : NO Score: 8.38 # Score Detail : 1:0, 2:3, 3:3, 4:0.65, 5:0, 6:0.25, 7:-0.32, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 180603-181829 **** Predicted by CRISPRDetect 2.4 *** >NZ_PTJM01000033.1 Paenibacillus peoriae strain IBSD35 352, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 180603 32 100.0 34 ................................ CAGCCATCGCCGCCCAAATCCGCATCGAGGACTA 180669 32 100.0 31 ................................ ACGCTACCCAAAACCGCTGATTTAACCCGGA 180732 32 100.0 35 ................................ AAATCATGCAGACAATCAGCGAACAGAACGCCGCT 180799 32 100.0 33 ................................ ATGTGCTTAATTACCTTTCCACGGGTTGACCAT 180864 32 100.0 35 ................................ ACCGAATGAAAACCGATATACCTAGAAGAATTGTA 180931 32 100.0 33 ................................ TGTTGGGAATATTCTTGATCTGTCTGATATTAG 180996 32 100.0 37 ................................ ATCACCTGCTGCTGGATACCAGATATCCACTTCTGCA 181065 32 100.0 34 ................................ CGGTTCAGCCAAAATCATTTTCTATACAGGATCA 181131 32 100.0 35 ................................ ATGAGTCCAAAGAAGCTGTCGCGCCCCTGACCATC 181198 32 100.0 34 ................................ GATTACGTTCTTGGTGCGCTCTGCCTCCGATTGG 181264 32 100.0 36 ................................ AAGACCTATTTAAATACATTGGAGAAATTGAACTCC 181332 32 100.0 35 ................................ TATTGCAGCGGCAAAGGCACTATTTGAAAAGGTTA 181399 32 100.0 33 ................................ CTCCAGAACAACAAAGCCGCGAGGAACTAATAA 181464 32 100.0 34 ................................ CATCCAAAAACTGAAAAAGCCCACGGGCTGTGGA 181530 32 100.0 34 ................................ ATAGCAGCCAGAATGGAAGGCTTGACCCGATACG 181596 32 100.0 35 ................................ AACCACGCTATGCACTCCGAAGTGGAGTTAATTTC 181663 32 100.0 34 ................................ GTCATGAGTCTAGCCGGGGTTGTCATAAGTGTAA 181729 32 90.6 36 .........TG.A................... TATCTGCCGTTACTATTTGTGTAGCAGAGGTGCTAT G [181743] 181798 32 84.4 0 ......T...................G.T.TG | ========== ====== ====== ====== ================================ ===================================== ================== 19 32 98.7 34 GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Left flank : CATTTTTGTGGAAGTAGGTTGATCTTGTTAATAATAATTACGTATGATGTAAGCACATTAGATAGAGAAGGCAGAAAAAGACTGGAAAAGGTTGTGAAAAGGTACGGTACGTAGACCACGGACAAAGGGTGTAAAATTCCGTGTTTGAGTGCATTTTGGATTCGACCCAGTTCCGCCGTTTAAAATATGAATTAGAAGAATTGATAGACAAAAAAGAAGACAGCCTGCGTTTCTACAACTTTGGAGATAGCTATAAAAAGAAAGTAGAGCATATAGGGCTAAGGAAGCTTACGATATGGAAAGCCCACTGATTTTATAAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGGTCCTTCGCACCTCGAAATCTGTCGAAAAGTATTTAAAATGCTATTTATCCGTAAAAGTCAATAGTTGATCCAAGCTTATTTGACATCAGTTTTTGCGACAATGTGTAGAATTGATATCATTAGGGTATCAATTACTGCATTTTCGCT # Right flank : GAAAAAGAAGGCTTGTTTCGTGGCCTGCCCAGCAGTGAATAGGTGCAAATTTCTTCTTAACGGATTTCTTATTCGACAAATTTCCCCTTACTTTTATGCAACAATTACTTAACATTTACAATGGTTGAAGTATAAATTAAGGTGGGAGTTGCTTATGAGAATTTCCATGAGTAAGTTTCTAAAACGCTATGCAGTGATTTTGTTGGGCTACGCAATAGGTATAGGGTTATTTTACGCTTTGGGATATAAGATGAGCGCTATGGGAATCTATGCAATTTTGACAGGAATGGTGATTGGAGAAATAATCAACTACACATTATCAAAGCGAGAGAAATGAACCTAGGTATCCCCTGATTGCATCAACATCAGGGGATTTTTCATGTAATTAAAAGGTCCAACAGAGTTTCTGCATGGGACCTCTATATCATTACTGGTGAGAATCCACATGGGGAAAAAATTAGTCATGTCAACTCTGTGAAACCTTTTACTTGGATCAATCC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCATGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //