Array 1 744700-743877 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP041722.1 Staphylococcus lugdunensis strain SL13 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	====================================	=======================================	==================
    744699	    36	  97.2	    34	...............A....................	ATAAAAGGTGATGTAATAATAATGTCTTTCCAAC     	
    744629	    36	 100.0	    36	....................................	ATTTGTCCTTCTTTTACATGTCTTTTAATAAATTTT   	
    744557	    36	 100.0	    36	....................................	ATAATCAATTGTTAAATACATTTCATTTGGATTAAT   	
    744485	    36	 100.0	    37	....................................	TTCTGTATTTCTATTAACCAATTCATAAGTGTCATTA  	
    744412	    36	 100.0	    35	....................................	TTCATCATATCCTTTTATATAGTTTTTGTTTTGTT    	
    744341	    36	 100.0	    35	....................................	TGGTAAATCTTCTACACTGTCGACTGGGTCTTCTA    	
    744270	    36	 100.0	    35	....................................	TGTGCACTTTTACACTATTAGTTTAAATATCTCCA    	
    744199	    36	 100.0	    37	....................................	CTTTATATACAGTAGTTAATGACTTATGAAAGGTTTC  	
    744126	    36	 100.0	    35	....................................	CCAGTTGCTATTTTATTTGTCAACCATTTTATTAA    	
    744055	    36	 100.0	    32	....................................	TAGAATGTTTAAACAAGGTGTTTCAAAACCTG       	
    743987	    36	 100.0	    39	....................................	AACATTTTATTTACGTCTGTTTTTGCCTCTACTAAGTAA	
    743912	    36	  91.7	     0	..............................A.A..G	|                                      	
==========	======	======	======	====================================	=======================================	==================
        12	    36	  99.1	    36	AATCAGAGAATACCCCGTATAAAAGGGGACGAGAAC	                                       	       

# Left flank :   GATTTTTTAGAAGTATCATGATACAATTTGATGCTTTTTTTGAGTCTCATAAACTTTATGATAAAGAAACATTGGAATTTTTAGAGCAAAATGTAAATATAGTTAATTATAAATTGAAAAGTGTCCGTTTTCATATGGAAAAGGTTAAAATTCCATCTTTTAAGGGAGAAATTGTATTTAAAATAAATGGGCCATTGCCGTTTTTACAATTAGTTTACTTTTTATTAGCTTTTGGAGAATTTTCAGGTACGGGTATAAAGACTAGTCTAGGTATGGGGAAATACAATATAGTTGATAAAAATCAAGATAACTAAAAAGTAGTTACACTTCATAGTCCATTTAAAACAAATCGAATTTATAGTATAATATATATAGGGAAATAACCTTTAAGTGTCAAATTTTTTGACAAATAAGGTATTACCTAGAGTTAGATTGTCAAAATTTTTGCCAATTTAAATTATCCTTCAAACTTAGGCAATACTGGATTGAAATTAATTGCT
# Right flank :  ATGTTAATATTAAGGTTTTTAAAAAACTAGATAATAACCAAAGCGCTAACTCTGCATTTGAGTCAGCGCAGTTTGTTTTATTATTTAAAAAATTTAAATGATTTTGACAATCTTAAAAAAGGTTCTGTTGATTTTAACAAGAATTAATGAAAAGTGTTGATAGTTATATAAAAAATTGGGAGATGTTGAAATTATGGAGGAAGTACTGGATTTAATAATAAATTTAGTTAAGTTATTTATTATAGTTCCGTATTGGTTGATTAGTGTTGGTGTAACTGCCTTTTTTTATTTTAAGCTTGTCGTGTTTATTCGGAATACATTTAAAGCTTTTTTTGATAAATACTTTTATGGCGAAGACAGTGACTCTATTCCTTATGCTGTAGGTCCATATATAATGATAATAACTGCTATGCTTATTGGATTAGGAATAGTTATGGTAATTGTTTTATTTTTTAATGCACTTTTAGGGCAAAATTTGTATACCCTATTATTTATAGTTG

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATCAGAGAATACCCCGTATAAAAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-6.50,-7.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [3-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.78   Confidence: HIGH] 

# Array family : NA
//