Array 1 1530-2331 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOZC01000010.1 [Clostridium] aminophilum strain F, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 1530 35 100.0 35 ................................... GCCTTTTGTCGCAAGTGTTGCCGTACCGGATAACG 1600 35 100.0 35 ................................... GCAACATATGCTTCATCGGGGAAGAGTTCTTTCCC 1670 35 100.0 35 ................................... GCCTTTTGTCGCAAGTGTTGCCGTACCGGATAACG 1740 35 100.0 35 ................................... GCAACATATGCTTCATCGGGGAAGAGTTCTTTCCC 1810 35 100.0 35 ................................... CCGGAAGCAATTCCCCCAATGGCCTGTCCAAGCCA 1880 35 100.0 34 ................................... TTAATTGCCGGATACTTGAGATGGAACTTGTCAC 1949 35 100.0 33 ................................... ATATCATCATCAAGAGTCTGCCTTGCATCACAA 2017 35 100.0 34 ................................... GTTTATGTAAACTCTTAACGAGTAACCATCTTAA 2086 35 97.1 36 ....................A.............. CAGACCATACCTTTTCAGACGGGATCTTTACCATCT 2157 35 97.1 34 ....................A.............. CTGATGCTGCGAATCTGCCAGAACTCTTGCGACC 2226 35 100.0 35 ................................... GGTGTACTTGTTCCACTCAATCCACTTATCATCTT 2296 35 91.4 0 .....T.........T............G...... | G [2328] ========== ====== ====== ====== =================================== ==================================== ================== 12 35 98.8 35 GTTTGGAGAACAGCCCGATATAGAGGGCAATAGAC # Left flank : GGTCTTTGGTAAGTCGCTTAGCGAGAGTGAAGCGTTAGCGATTGTTGCAAGCGGGATTGGTTCAACAGTTGGTAAGGCTGTTTCCAAAGCGATAGTTAGCCGTATTCCTGGATTCGGCAATGTCGTGAATGCGACGATTGCTGTTGCCATTACGGAGAATCTGGGATGGTTGGCTGCAAGTCAATTCGCAGATGAGAGGGACGCTGCTCTGGCATGAAGATGATATCGTATGGGTTGGGTAAATCTCGGCCTATACGATGTTATGAAAAATTTGTTTCGGGTCGAAAGTAGACACTCAAGGGTTGAATGGATTAATATGCTGGTTTATAATCAAACGAAACAAATGCGGTAAGGTTTTGGGCCGATATGGCGTAAATTCTAACGTTCTGAGCTTCGGAGAACATAAAATGTTGAGGAGATTGTCTCTGACATGGATGATGATTTTTTCGGCCGATAAATGCCTAAAGACCCCGCATAATACCTGCCTTATAAAGAGCAGG # Right flank : CTTTGGCTGCATGACTCGATCATTAAGCCTGAAACTAAGTTTTCTTGTGTTGAAATCTTCCTAATACTGAGGTCGTAAGACCATCTTGATTATTCACGAATCTGTGACTCTGTTCTGAGAACAATCTCATACTATAAGGACAATGTTTTTTGAAATGGAGGATTTAGAAATGGAAGAAAGAGAAAACAAAATGAGTTTAGGTGATGTCTGCAATCTGCTTGGATGGACAATGCTGATTTTAGGAACCATTGGCGCATTCATTCTTGCAAACGTATTTGGAACGGAAACAAGAGGGTACTACTATTCGTATGAGGCTCGTGATTGGAATACTACTCTCGCGATTTTTTTTGGAACGCTCCTTCCGGTATGTGCGACCTCATTCCAGCTGTTGGCAACTGCAAGAATTATGGAGGTTCAGCAGGAGATTCAGGAAAAACTGAATGCAAATTGATATTCCAACCTTTGAGAGTTAATTATACATAACCGTACCGGTCATAACT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGGAGAACAGCCCGATATAGAGGGCAATAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.30,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 103415-103930 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOZC01000008.1 [Clostridium] aminophilum strain F, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 103415 36 97.2 31 .......A............................ GGTATCCTCACGGACGAAAGAAGTTTTTGCA 103482 36 100.0 31 .................................... CTGTGTCGCTTTGTTTTTCGGTCCCTCGCAA 103549 36 100.0 31 .................................... GGTATCCTCACGGACGAAAGAAGTTTTTGCA 103616 36 100.0 31 .................................... CTGTGTCGCTTTGTCAAGTTTTACGGATTCT 103683 36 97.2 38 G................................... GATACTGTTCAAAATGTTTCATAACAAGTCCCTCGCAA 103757 36 100.0 34 .................................... ACGAAAGCACCGTAATCGCTGTATGCCATAATTA 103827 36 100.0 32 .................................... CAATTCAGTGCTTCCTCCTTCACTACCTTCTC 103895 36 88.9 0 T................................CGT | ========== ====== ====== ====== ==================================== ====================================== ================== 8 36 97.9 33 AATTTAGGAATAGATTCTCCGAAAGGAGATGGAAAC # Left flank : ACCATTGATTCTTTGATTTGCCCGTATGGTAAAGAAGATATTATCAACGCTATAAGGTTTTTTAACAAGAATTATAATGAGATGTTTCGCGACGTCTTTCCGAAGTTCACGCCAGGAAAAACGGATTCTGTCTATTTGGGAGGCGGAACAGGTTTTGTATCAAAAACAGTGATATATCCGTTGTTTGGGAAGCGAAATGGGATTGATGTGACAGTGAATGTTTTCGGTGCGACAAAAGTGCCAAGAAACCATAAGCATAATTTGGATAGGCAGATCGGGGTTTCACCACATATACTTAAAATGACATATTATTATGGAAAAATGTTTCATATGGGCGAATGCAGATGGCGGTTTTGTTGATGGATTTTGCCGCGATGCCTAAAAATACGGGCTTTACAACGATTTTTGGGCATCCGGCGTTTATCTCTATAGGCTGTTTGCAGTTTTGCCACGCAAATCGATATCTGAACCACGATTTTATCAGGGAATCAGAGGATGGG # Right flank : TTTTTTAAATTGCAAATCATGGTAGACCCATATAATCTGAGGTTATAATATGAGTGTGGTATATATTACAGAAAATGGTGCAATGTTAACTGCTGAGAATAATCGTATCAATATAAAATATAAGAATGGTTTGCTGGAATCGTTGCCCGTAGAAACTGTAGAGTGCATTATCTTGTTGGGAAAGGGGCAACTATCTACACAGTGTATGGAAACATGTATGACAAAGGGAATACATGTTTCCTTTTTCTCTAAGGGGGGACGATATTTTGGAAGACTAATGTCTACGGGTCATGTAAAAGCTGAATTGCAACGGAAGCAGGCAGCACTATATGAATCACAATTTGCTATAGACTTGAGTCGAAAAATTATTAATGCAAAAATAGCAAATCAGATTACTGTTTTGAGAAGATATGCAAAGAGTAGGTCAATTTGTGTGGACGAAGAAATCTTTAATATGCAAAATAGTAGAAAAAAAGTTATGCAGGTAAGTACAATATCTG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATTTAGGAATAGATTCTCCGAAAGGAGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //