Array 1 196812-195100 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWFQ01000004.1 Bifidobacterium animalis subsp. animalis ATCC 27672 A27672_004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 196811 33 100.0 38 ................................. TTGCTGTTCGACATGGATCAATGCCCACTGCCTTGGGC 196740 33 100.0 33 ................................. ACCATCGCGTTGCCCGACACCGGTTTGGAGCAA 196674 33 100.0 33 ................................. ACCATCGCAGCGGGCGCGGCCGGCGTCTTGATG 196608 33 100.0 34 ................................. TACCGAGGTGGCGCGGGGAGTCCCTCCCCACGCC 196541 33 100.0 34 ................................. ACCACAGCTGCCATGCGCGGCGACACCGATGCTG 196474 33 100.0 35 ................................. CACGAGGACCTCCCGCCAACGCCAGCCCCCTCACC 196406 33 100.0 35 ................................. AAGTTAGAATCTGAGGATTATAACATCACAGGTGT 196338 33 100.0 34 ................................. ACATATCCAACTCCCTGAGTTGCTTTGATAATGA 196271 33 100.0 34 ................................. TTACGCAACACGCCGTCCTTGACCGCGAGCTTGC 196204 33 100.0 34 ................................. ATCAGGTTCGAGGCGATCGCACGCGCAGCTGACG 196137 33 100.0 33 ................................. ATCAGCTCGAGCACGTGTTTGCAGGTGGCGGTG 196071 33 100.0 35 ................................. AATGTCATTATTCCTGTTCCTTCTTCTTGAATCGC 196003 33 100.0 33 ................................. ATGTCGAGCAGGCCGAACACGCGCATCCCGCAA 195937 33 100.0 33 ................................. GAACCCGCGACCCCGGATTAAACGTCCGGTGCT 195871 33 100.0 34 ................................. CAAGCAACCTGCGGATCCGATGATTTCAGCTCGT 195804 33 100.0 35 ................................. ACCGACGGGCTGACACAGGTCTCACCCGTCAAATA 195736 33 100.0 33 ................................. GGCAAGCATTTCCAACACCATGTCAGCGATGAT 195670 33 100.0 34 ................................. ACCCCATCCAACACGGCCTTCGACGTGGCCTGGG 195603 33 100.0 35 ................................. AACTGTCGGACCGGCTGGAGGAGTTGGCCGTGCAA 195535 33 100.0 34 ................................. TCATAGGACACCGTGTCCTTGACCTTGCCATCAC 195468 33 100.0 34 ................................. GAAACCGCCGCCACCAAGGTCGGCATGGCCGTCG 195401 33 100.0 35 ................................. CGAGCTTGGTGATGCTGATTTGGTGTCGAATGAGC 195333 33 100.0 36 ................................. TTACCTAGTCGTTCGCGACTAGTCTCAGCCCATTCG 195264 33 100.0 33 ................................. CTTTTTGTTGTGGGGCGGGTTCACCTGTTGGTG 195198 33 100.0 33 ................................. TAGGAAAGGCACTCCAATGACCGACACGATCAG 195132 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ====================================== ================== 26 33 100.0 34 GTCACCTCCCTTCGGGGAGGTGTGGATTGAAAT # Left flank : TCGCCAAGACTTGCATGCGATTCGGACAACGAGTGCAGAACAGCGTGTTTGAGTGTTCGATTGCACCATCCGATTACTTGATGCTGGTTTCGAACTTGCTGGAGATTATCGATGAGGAGATGGATAATCTGCGCATCTACAAACTCGGCAAGAATTATGCGAGTAAAATCGAGAGCTATGGACATGACAGACATGTGCCGTTCGATGATATCATGATGATTTGAGAACACAGGCGTTTGTGGATTGAACGTGCATGGTGGTGCGAAGGGTATGCTGCCATGATTTCGTCGTAGGTTCGCACCGACAAGAGTGCCTCTACGCTGGTATTCTTTTCCGCATTGATCGGAATGACGCTTGATAATTCAACAATGTTTCCATATTTCAGGTTCAGCTTTGAGATTTGCATGTCGTGCGTCTTCCAGTAAAGGTTTTCTGAGGTAAGATTTAGGCTGAAAGTGGGCATGACGTCCGGAATGCGGACTTCGATGTTCACTTTTGCA # Right flank : GAGAGGTTTGAGTGGCAGTTTCGTCAGATAGTCGCCCGTTCTCGTTCTGTTGGCGGTGTGGATTCTCGTCGCCGATGCCAGACATACCGTTGTCTGGACGGGTTTGAGCTTCGGTGCCGGACGGTTCCTTGGTTGGTTCGCAAATGCGGAGGTGTGTTTGGTGGCCTTGGTGACCGTCTTAGCGATGCCTTCTCTGTCCGTTCCATGACATATCTGATTCGTCGCATGTATTTTGTCAAGTCGGTGTTTTGGTTTTGCGAGAAGTGCAAGAAAAGCATGAGCGCGGATGTTAGGAGACACCCAATCGGATTCAACAACCAGAAAGGGAGCTATGACAACCGAGTAGATTGCCATAGCTCCCTAATGTCACGCGATGACCCGTTTATGCTGTCTGAGGCGCGGCGCCCGCGGAGGGCACAGCGGTTTCCTTGATGAAACCATGTGATTCCGTCGTATCCGCTATATGATTCGCGCTGTCAATTTGCTGCTGCAGAGCCTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACCTCCCTTCGGGGAGGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-8.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : NA //