Array 1 235722-232026 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069534.1 Corynebacterium glucuronolyticum strain FDAARGOS_1191 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================== ================== 235721 29 100.0 32 ............................. AAGAATCCATCAAACAAAACGGCCAATATCGC 235660 29 100.0 32 ............................. GCGTCGATGAGGTAGCCGTTTCTTGGTGTGCC 235599 29 100.0 32 ............................. AAGGAGAAGAAATGAGCGGCTACAAGCACTGG 235538 29 100.0 32 ............................. GAGTCCGAATCCTGGGACTGGTCGACACCAGA 235477 29 100.0 32 ............................. GGCGTTCATGAGGACGGCGCGATCCAGTTTGT 235416 29 100.0 32 ............................. GACCCCTATAGCCCCGAAGGGCAAAAGTGGGA 235355 29 100.0 32 ............................. GTTATTCAACGGCAGGATGGTGAAGGAATCAA 235294 29 100.0 32 ............................. ACGGAGCGCACGCCAACATTGGGACCAACCAT 235233 29 100.0 32 ............................. GAGATCATCGAAGCAGCCAATGGCAACACAGT 235172 29 100.0 32 ............................. TGGAATTCCACCCCAGCGATGAAGGCTACGAC 235111 29 100.0 32 ............................. GCGTGGAGCCGCGTGGAGGTGGGTCATAGACC 235050 29 100.0 32 ............................. ACACTATATGCACTTTAGTGATTTTGGAATTT 234989 29 100.0 32 ............................. AGTGGTAGTAGTGATGCCACCGCCGACACGAG 234928 29 100.0 32 ............................. ACGAACACGCCCATTGCGCGGCTCACGCTCAG 234867 29 100.0 32 ............................. AAATCATCTTCGGAGAAATAACCCTCGGCTGC 234806 29 100.0 32 ............................. CAGGTCGTCAAGGGTGAGGATTTCGTCCATGG 234745 29 96.6 32 ......................C...... CGGGGGTAATTTAATGTAACCCTATATTGCAT 234684 29 100.0 33 ............................. AAGTACACGGGCAACAAGGTTATTCTTTCCTCA 234622 29 100.0 32 ............................. GAATGATCTCCACATCCTCAGTCGGCTTATCA 234561 29 100.0 32 ............................. CAGCATCATCCACGTAAACAGATTCCTTGCGG 234500 29 96.6 32 ............................T TAGCCGATTCCGAGAGGAAAACCTTGATTAGT 234439 29 96.6 32 ...........A................. TTCCCCTCAGACTCCGGGGCCGGAGTATCCTC 234378 29 100.0 32 ............................. ATTGCAACCCCGCCCGGCTCCTGTGAGCTGAA 234317 29 100.0 32 ............................. TGGTGAGGCGCTGGGTGCAGCTGGTGAGGTCG 234256 29 100.0 32 ............................. CACATGTCAGAGTTAATCCCCCTGACGAACCA 234195 29 100.0 32 ............................. GCCACATGGGCATAAAAATCGGTGACGGTTTG 234134 29 100.0 32 ............................. GTTGTGTGTGATCCCGTTTTCAACCCTTTTAA 234073 29 100.0 32 ............................. CAGGCGCAAAGCCTTGATACTCTCATGGCTTG 234012 29 100.0 32 ............................. CTTGATGGGTTGGAGCTGAGTATCCGCAAGAA 233951 29 100.0 32 ............................. ATAGTCCAAACTGTTTATGAGTGCTCGGGCTT 233890 29 100.0 32 ............................. CAGGGGGTGGTGAGCCACACCATGATGTGGCC 233829 29 93.1 32 ............TG............... GGTCACGTCTCGGTTAATAAAACGCCGAAGGT 233768 29 100.0 32 ............................. GTGTGCTTCGCCAGATCGCAATTATTGCTGGT 233707 29 100.0 32 ............................. GCGCTCAGCTTTGAAACTTGGCGGTGCTTGTC 233646 29 100.0 32 ............................. CCTCAAAAAGATTGACGGGAAGGAGTACCAAT 233585 29 100.0 32 ............................. GCAGAGCAATATGAAAATCTGGTCTTCAACGG 233524 29 100.0 32 ............................. GGTTATCATGCTTACATTTCTCGGGAGTTTGA 233463 29 96.6 32 ............................T CATGCGTGTCACAGCCGAACAGGAAGGCAGCG 233402 29 100.0 32 ............................. ACCATTAAACCCAATGACCTAGTACGCCTAGC 233341 29 100.0 32 ............................. GCCACATGGGCATAAAAATCGGTGACGGTTTG 233280 29 100.0 32 ............................. GAAGCTTGGTAGCCAGGGCATTAGCTTGTCTT 233219 29 100.0 32 ............................. TACTCGGGGTGGCCACGACCCAACGGGCATCC 233158 29 96.6 33 ............................A CGGAATCCCCGGAAAAGACGGGACCCGCCTCAC 233096 29 100.0 32 ............................. GATTAGCCCGTGTTCCATCGTCGATTCTCATG 233035 29 100.0 32 ............................. TTCGGCGCGCGGACACCCAGGCCTCGGAAATG 232974 29 100.0 32 ............................. GAGCATCAACTGCGTCGAGGAGGTAGATTCGT 232913 29 100.0 32 ............................. CCTGCGGAGCTCGTCCATCCAATCCATGCCAC 232852 29 96.6 33 ............................A CGGAATCCCCGGAAAAGACGGGACCCGCCTCAC 232790 29 100.0 32 ............................. GATTAGCCCGTGTTCCATCGTCGATTCTCATG 232729 29 100.0 32 ............................. AAAGGGAACACGGGAGGAGTTCGAGGGTAACA 232668 29 100.0 32 ............................. CAGGCTCACCGACGCGGAGTTGGACGCGTTGC 232607 29 100.0 32 ............................. ATTGAGGACCTGGAGAACAAGATTGAGCAGGG 232546 29 100.0 32 ............................. GGCCCTTCGGCTCCCCAGGAAGGTAGGCATGG 232485 29 100.0 32 ............................. TATATCCACAGCTGGAGATCAGCAGGCTAGGC 232424 29 100.0 32 ............................. GAACTCGCAGCCATTAAAACCGGCGACAGTGA 232363 29 100.0 32 ............................. GACTTTTTTCGCCAGGTCGATGCTTCACAGGC 232302 29 96.6 32 ..........T.................. TTGGCGGGTGCCCTTGGATCGCCCGATAGCGG 232241 29 93.1 31 ..........T.................T TATCTTGAGGAGATTCGGTCGGTTGTGCTCG 232181 29 82.8 98 ...........A..C......A..C.C.. TGTCTCTACGGTTCGGCGTAACATCTGCGTGGGGTTCATTCTCCAAATACAGTGGAGGTATTTCTGGCTCTTCCCCACAGATACGGGGTAGATATGGC 232054 28 79.3 0 GAA...........-..........A..T | T [232042] ========== ====== ====== ====== ============================= ================================================================================================== ================== 60 29 98.7 33 CTCTTCTCCGCGCATGCGGAGGTATTTCC # Left flank : TGAGGAGGTGGCTGGCCACACACAGTATGGAAAGAAATAGAAGAGGAAACTCACACGAGTTCGCGCTGCATCAAAAGAGCTCTCCCCCAGGTACAGGCCGTCAATGGTTATTCATCATTTCTCTACACACCCCCACCACCGACGTCTCAGAAAGTTAACCAACCACCATGTTTCTCGTTATCACGTGTTCTGCTGTTCCCGACCACCTGCACGGCTACCTCACTCGTTTCCTCTCTGAGGTTGATACCGGCGTGTACGTCGGCAATGTTTCTCGCCGCGTCCGCAACAACCTGTGGACGCGCTGTGCCACGGCGATCAAATCCGGGAGACTCACGATGATTAACCGCGATCCCGAACGTGAGCAGGGGTTTGCCGTTAACACCCTCGGTTCCCAACGACGTACAATCATTGACATGGATGGCCTCCTCCTTGCCAGCACCTTATTACCCGCGCGGCCGAAAAACCCGCCCCGCAGAAAATAAAGCCCCAGGTGAGGAAGA # Right flank : CGTTCGTCCTCACAAGAAATTTCGACGGAAGTGAGATTGCACGCGTGGGGATTGAGGGTGTGAATCCCACTGTCGTGGGTTTGATGAGGTAGTCGATGTTGCGGAAGCTTTGGCATCGGCGTGCGTTGTGCTCCGTACGTTGTTTCAAAAACGGGTTTCATCAAACGGAACAAAACCTGGGACACTTCATATCCCACCCCAGGCCTAATGACTTGGGTGCAGCGGCAACGCTCATCCGATTTAGGCAGAGTCGTTGCAGGATCCAGTGGGTCACCTGGTCCGTGGTCTTTGAATTGTCGGGCGTGCAGGCAAGGCCAGCACGGAAGATCTTCTGCAAGCAACGCTTGTTGGTGCACCGGTAGCGTGGAAGGCGCACATGAAGTTGTTGGGTGGCCGACGATGGGCAGATCGACCAGGCTGCGGATGACGTGGTCGCGGAATACTCCAGGCTGCCCGCAGGTAGGGCATTCATTGATCGGCTCGACGGGTTCGGCTTCAAT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCATGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 2411124-2414305 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069534.1 Corynebacterium glucuronolyticum strain FDAARGOS_1191 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2411124 36 100.0 35 .................................... TCGAAGGTGACGATGCCGCCCTCGGCGAACCGGGG 2411195 36 100.0 36 .................................... TCCTCGGGTGTATCCGATCCAGCGACGGTAGCAGTG 2411267 36 100.0 36 .................................... ATGATTACGCACACGTTCAAGGACTTGCAGGCGCTG 2411339 36 100.0 37 .................................... GGGATCCCCGGCGCGCCCTACGATCCAAGGTCACCAA 2411412 36 100.0 37 .................................... ATCAAACGGGCACATCTCACAGAGGCTGAGGCGACAG 2411485 36 100.0 38 .................................... CGCCGAAGATCGTCGGGGACTGAGACAGCGGCTTAAAC 2411559 36 100.0 38 .................................... ACAGTGATCGTTGTCCCCCCTCGCCCGCAAAACCGCAA 2411633 36 100.0 36 .................................... ACCCCCATCGCAACCCTGCTCGAAATCAAAAACCGC 2411705 36 100.0 38 .................................... ATGCACGCCCTGGATGATATGATTAAGTAAGCCAAAAG 2411779 36 100.0 38 .................................... GCACTAAGGGGCACCACAACCACCACAAACAGTAAACC 2411853 36 100.0 38 .................................... GTTTACGAGCGCACAGTGAACCAGGTAGTTGTTGCAGC 2411927 36 97.2 36 ........................C........... TCGGGTCGTATGGAGCATGATTTTCAGCTGTCGATG 2411999 36 100.0 37 .................................... ACACCGTCGATGCCTGAGTCCCAGTTTGAGGAATTGG 2412072 36 100.0 36 .................................... TTAAAACCGTCAACCACACACACCCGCCTTAAACCC 2412144 36 100.0 37 .................................... CTTGCCGCGCTCGGGCGATCTAAGGGTACTTGCCAAG 2412217 36 100.0 37 .................................... TGAATCAGCGAGCTCTTCGTCATGGAGATTTCGCCGA 2412290 36 100.0 36 .................................... GTGTCCTCCTGCCCCTGTTGCTCGTGCTGCGGCTAA 2412362 36 100.0 38 .................................... CCAACACTTGCCCCTCGTTGACGGTGTTAAACAGCCGT 2412436 36 100.0 37 .................................... CCGGAATGGCAGGCACAGGCCAAAGCCCTGGAGGCCG 2412509 36 100.0 38 .................................... AACGGAGAAAAATTCTTCAGGAGCGGAGATTCGAACAA 2412583 36 100.0 36 .................................... GGCAATACTACACAGGGCGGTAGGTGACAAACGGAG 2412655 36 100.0 37 .................................... AACACACCGGTGAAGCAACTCGCCCCCCTGTTTGGGC 2412728 36 100.0 39 .................................... TCTGCAAACGAAGCTCTACATGATGCCGTAAGCGACGCG 2412803 36 100.0 37 .................................... GGTGGTATTGAAGCCGGCTTCGAGCAGACCAGTGAAC 2412876 36 100.0 37 .................................... TATCCTCCGAACGAACCTCAACCCGTACCACATCCCC 2412949 36 100.0 37 .................................... GCGGATTCGATTGCGTCCTTACCGGGGCTACGGCCAC 2413022 36 100.0 38 .................................... ACCCCGGAGATGCCCGAGTCGCAGTTTGAGGAATTGGG 2413096 36 100.0 39 .................................... ACCATGACTCGTGGATCATATACTCTGTCACACGTACAG 2413171 36 100.0 38 .................................... GAAGCAGGTGCCGCCCTCAACGACACCACCATCCGCGA 2413245 36 100.0 37 .................................... ATGCGGCTAAGGCAAATCGCACTCGATGGAACCAAAG 2413318 36 100.0 37 .................................... GAGGATTTGCGTGCCTGTCTGGTGGCAAAAGGAATGG 2413391 36 97.2 37 ..............A..................... GAGGATTTGCGTGCCTGTCTGGTGGCAAAAGGAATGG 2413464 36 97.2 35 ..............A..................... CAAACTTCTCTCCAGCTTCATCCCCGTCACACAAG 2413535 36 100.0 38 .................................... TGTGAACAACACGCGGCAGACGGGTAAGAAAATTATCC 2413609 36 100.0 36 .................................... CATAGGTTTTGCACCGTATCGACGGTGGACATGAAA 2413681 36 100.0 37 .................................... GACACGGTAGAATTGCGGCTTCAAATCATTGGTGCCG 2413754 36 100.0 38 .................................... TTTGGCGAAGCGGATTCCAACGCTCATGGCGGATGCGC 2413828 36 100.0 38 .................................... CTGGATGGTGGTTTCCAGGCAGGGGGCATATTTTTTGG 2413902 36 100.0 38 .................................... AGCCCCTTTAAGGCCAGCCTCCATCTTGGGGGCAAACC 2413976 36 100.0 40 .................................... ACGATAAGCCCAAAACTGGGGGTCGCCATGAACAACCCAC 2414052 36 100.0 36 .................................... GCGCGTTCGTGTTCGCCGTGGTTGCTTTCGTGTTTG 2414124 36 100.0 37 .................................... TTACAGCAACTGCCCCCATCGAGTGCGCAGAATTCCG 2414197 36 100.0 37 .................................... GCGGTGACGGTGTTGGGCATCATTGTTGCTGGTGGGG 2414270 36 97.2 0 ...................................C | ========== ====== ====== ====== ==================================== ======================================== ================== 44 36 99.7 37 GTCGCTGCTCTTTCGGGAGCAGCCTTTCATTGAGGG # Left flank : AGAGAAGACGCACGACGCACGTTGATTTGTTATGACATTATCAGCGACAGGCGAAGGACTAGGACTGCCAATCTTCTGTCTGAGTATGGCGACCGGGTGCAGTACAGTGTGTTCGTAGTCGACATATCTCCAGCACGCTTACTTCAGCTCAAGGATCGACTCAGCTCGATCATTGATAATGAGGAAGATTCCATCCTCTTTTGTGATCTCGGTCGTGTTGCTAAGCTTTCCGAACACAAATTCGGCTATCTCGGCCGTTCTCGGGAGGTGACAGACAATGATGTCTTGATCCTCTAACGGCTATCGCCAGATTCACCTCGATTTCCGAGCGCGCCGGTATCACGCAAAACCCGGGTCACGCTCGTTGCAGCAAAATCTCTGTTCAAACCCGAAAATTCAATAGTGAAGGATGAAGATTAAGCCTCCGAATGCTATCGTCTAACCTAGCGCTCGTTTTGTGTTACAAAAACCCTGTTTATCGCCCTGCTTTTGCAGTGGCA # Right flank : CTTTTTCTCTGGTCGGGGATCGGGAGGCCTTCCACCGCGCCCCGCGTGACACTGGAACCAGCCGCCCACGGGCTGAACCGTGGGAGAGTCCCGGAAAAGGGGAGGACGCACGGGTATCGAGAAGCGAAAAGGGGAGGGAGGCGTGGCCTCGGTCGTTGAACAGGGTGTTCATACGTTAAAGGGGGCATCCGCAGGTGGCGTGGGTTCTGCTCGCTAAGCCGACGTGCTTCGTTACAATTTCTAGTTTTGAGCTCCGCCTAGGTTTCGGGTCGTGACCTTTACCTTCTGTGCAGTACAATGCGAGTAACTGGAATAGGGACAGATCTCCCCTCCAAGCTTCTCGTCGGATCAGCGCCACGCGCGAGGGGGGCATTTTACTGTTCCGACTCGGTGGACGCGGGTCTGGTCATTAGCTTTGGCGCACTAGTTTGCTGAAGGAAACTATGCGGTTCTCTCGGGTGCGGCGAAGTTGGTGCCGAAATTTTCGGCACCAAGTTTGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTGCTCTTTCGGGAGCAGCCTTTCATTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //