Array 1 248192-249558 **** Predicted by CRISPRDetect 2.4 *** >NZ_PCFT01000033.1 Klebsiella pneumoniae strain XPY193 NODE_35_length_441898_cov_32.641769, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 248192 29 100.0 32 ............................. CTTGAGCAAGGCGCTTTTTCTCCTGGGTGACA 248253 29 100.0 32 ............................. TTCGGAAAGTTCTTTTTCAGCTGATCCGTAAC 248314 29 100.0 31 ............................. GAAAGACGTTTTAAGTTATTGAAAAAAACCC 248374 29 100.0 32 ............................. AAGAACCTTTCGATCGCTGCAATTATCTACGC 248435 29 100.0 32 ............................. GCGTGGACACGGATGTAGTGCTGGAGAAGGCG 248496 29 100.0 32 ............................. TTTACGGAATTGCTTAGGTCGCGAGAATGTCG 248557 29 100.0 32 ............................. TAGTCATTTGCCGGTGACGGGAACCCCATAGC 248618 29 96.6 32 ................T............ ATTAAATAATTCGTTTACGTCCATGACGAGAT 248679 29 100.0 32 ............................. GTAATCCTGATATTGGCGTATCAATGGTCACG 248740 29 100.0 32 ............................. TAACCTCGTTTATGTGCGCGTTTTATAGTTGC 248801 29 100.0 32 ............................. TGCGGGCCACCAGGGTTGCAGGGTATCAATGG 248862 29 100.0 32 ............................. GCCCAGATCGGCTTTTCATCCCGAAGCCGGGC 248923 29 100.0 32 ............................. GACACCCGCACGCGCCGGGCAGGCGTGGAACT 248984 29 100.0 32 ............................. TCGTCGGGTTTATTGAGTATTCCGCCTGATTT 249045 29 100.0 32 ............................. CAGGTCAGCGCAATGTTCCGGGATATCGAGGA 249106 29 100.0 32 ............................. ATGACAAAACCAAAATTGAGTTTTGGCTGCAG 249167 29 100.0 32 ............................. GCACGATATTCAGCATCATCAGGACGGTTCAT 249228 29 100.0 32 ............................. ACCTACCAGATCCACACCGGGCGCTGCGAAGA 249289 29 100.0 32 ............................. TCACGCCCAGGGCTTCCTTTGCGTTCCGAAAA 249350 29 96.6 32 ........T.................... CCCCGTCGTCATTCGCGCATTCTGCGCACAGA 249411 29 96.6 32 .....A....................... TGCGTCACGACGCCGGCGACAGTGACATCGTC 249472 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 249530 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 23 29 98.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCGGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //