Array 1 2092-5630 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMTN01000040.1 Pedobacter glucosidilyticus strain DD6b PBAC_contig000040, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== =============================== ================== 2092 46 100.0 30 .............................................. GAGAGCAGGCGCTAAACCTGCTTAAACTTA 2168 46 100.0 30 .............................................. AATGCGACCATAGGGGGACACTCAGAAGGG 2244 46 100.0 30 .............................................. AAAGAAATCTTCGCTTTCTTCTTCTACATA 2320 46 100.0 30 .............................................. AGCGTTTAATGATATTCTTACTCATACCCA 2396 46 100.0 30 .............................................. GAGAGCAGGCGCTAAACCTGCTTAAACTTA 2472 46 100.0 30 .............................................. AATGCGACCATAGGGGGACACTCAGAAGGG 2548 46 100.0 30 .............................................. AAAGAAATCTTCGCTTTCTTCTTCTACATA 2624 46 100.0 30 .............................................. TATGGAAGTTAAAGGAACTAATTGGTTCAA 2700 46 100.0 30 .............................................. GAACACTGTTAAACATCACGCCCTCTTTAA 2776 46 100.0 30 .............................................. CTGCTGGCAATATTGCAGCAGAAGATTTCG 2852 46 100.0 29 .............................................. AATGTAGTTAGCGCTATCATTAACACTAC 2927 46 100.0 30 .............................................. AGTTTCATAGGGTCTAAATCATAAAGACTA 3003 46 100.0 30 .............................................. TTTGATATACAAACGCATTCTACAATAGAA 3079 46 100.0 30 .............................................. TTTGTTTTAGAAATATCAAGCGATGTAAGC 3155 46 100.0 30 .............................................. TCTTCTAGATATGTATAGAATGCTTTTTTG 3231 46 100.0 30 .............................................. CATAATATCTCTCCATGATTTCAGGGGGTA 3307 46 100.0 30 .............................................. ATAAGCAGGTCTATAGGCATCCTCTGAACT 3383 46 100.0 30 .............................................. TAAATCTATCAAAGAAAGAATATTTAGCTA 3459 46 100.0 30 .............................................. AAAACAATATCTACAACCGCTATTAAAGAA 3535 46 100.0 30 .............................................. AGAGCGAGGCAACAAAGTAGACTATTACCT 3611 46 100.0 30 .............................................. TTAAAAGGCGAAAGGTAGAAATCTCGGTTA 3687 46 100.0 29 .............................................. TCTTTATTGAAATGGATGCACAAGAAATA 3762 46 100.0 30 .............................................. CCAAAATCCAGACATGGGATTATTATCAAA 3838 46 100.0 30 .............................................. CATCAGCAGCAAATGCATCTGGCACAACTA 3914 46 100.0 30 .............................................. GCAACTAGTCCTATACCTAGAGCGATTAAA 3990 46 100.0 30 .............................................. AGGTAACAAAATCTAAAGGCGGTGGGTTTA 4066 46 100.0 30 .............................................. TATCAGATATGTTCAAAAATTACTAGGACA 4142 46 100.0 30 .............................................. GTAGAAAGTATTAAATAAAACATCATGCAA 4218 46 100.0 30 .............................................. AAGTCCTAACCTTCCAGAGATTAAGGATGT 4294 46 100.0 30 .............................................. AATAGTAGCGATGTTACTGGTGCACTAGGC 4370 46 100.0 30 .............................................. GGAGTTTGGTACCAGACAAAACCCAGACTG 4446 46 100.0 30 .............................................. TGGCAATGGCATCCTTAGTACTTATCGCAT 4522 46 100.0 30 .............................................. TCATCAGACTTTGTTCTAAGTGGCCTTATG 4598 46 100.0 30 .............................................. ATTATTGCTGTAGGCAGGCTCCATCTTTAC 4674 46 100.0 30 .............................................. CTAAAACACTAAAAAAAGCACTTTATTACA 4750 46 100.0 29 .............................................. AATTTAATTGGCTTAAAAATGCAGTAGGC 4825 46 100.0 30 .............................................. TAACCTAGCTGGGGAAATATTTAAAGTTAC 4901 46 100.0 30 .............................................. ACATCTCCAAAAAACACCTCATAAGCATCA 4977 46 100.0 30 .............................................. GTAGAGCATATTGAAGTTGATTTAGTTTAT 5053 46 100.0 30 .............................................. GAATCTAATGGAAAGATTGAAAACACTATT 5129 46 100.0 31 .............................................. TTTAAGCTTTGCTCTTTCGCCGCTGCTGTTA 5206 46 100.0 29 .............................................. TTAGCGGAAGTGACTTGTTTGACGCAATA 5281 46 100.0 30 .............................................. CTTCTAAATCTGTATTTTCTCTGAGAGCTC 5357 46 100.0 30 .............................................. TCTCTTTGAATTTTCAGCACCATATCTTTT 5433 46 100.0 30 .............................................. AAAAGCGATTTAACCTTCTTGCTAATAATA 5509 46 100.0 30 .............................................. AATAAAGTCATTAGATGCAATGAATTTCGA 5585 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== =============================== ================== 47 46 100.0 30 GTTGTGATTTGCTTTCATTCTTTGAACTACTGATATTTACAACAAC # Left flank : ATAGTTACGTTTAGGGTAGGTAATGTATTGCTCCAGTGATACCTGATATTTCTTTTGAATTATTTCCGCTACTAACTCAATAATAGCTAATTGGCTTTTACCTTCCGTTTGTAGTCTTAAAAAATGGGTATCCATTAGAAACTCATTAAAGCTATGATAGCCATATTTGCCTGTAAGCCAACTCAAATGTTGCTCAGTATATTGTATGGCCCGTTCTTTGGAAACGTATATTTTAGGCATAATGTGGTTGAGTTCACCCAACACAAATAAACTATCATCTCCGAACTGATTAGCCCAAGCCAGAATATGATCTATATCCAATGAAATACCATCCTCATTCCTGTATCCTTGTATAACTGATAAGATGTTCTTGGCTAGCAACTCTTCTTTCATATACAATTATACTTAAATGGATAATATTCTAAGGATTATAATAATGTTTAATATGAACTACTGATATTTACAACAACCGGAATGTAACAACGGAACAGTGGTAATAC # Right flank : CATACCTCTAGTTAAAAAATTGTAAATCAGTAGTTTAAATGTAAAATCAGGAATAAAAAAATCCGGTCAGTTTATCTTCCGGATTTTTTTATGTTCATTTTTTTATTGCTATTAACTGGCTTTAAAATAATTCTAATTGCTGTGGGGTGCTAGGTAGGTTCTTTTCTTCCTTACCGTAAAACAATTCCATCATTCCAAATTGCTTATCCGTAACGGTCATAATACCTATATGTCCTTTAGCTGGGAGTAGGTTTTTCACCCTTTTTATATGTACTTCCGCATTTTCTCGGCTGCTGCAATGTCGTAAATAAATAGAAAATTGAAACATGGTAAAACCATCTCGCATGATATCTTTTCTAAAGCGAGTATATATCTGCCTTTCTTTTTTAGTCTCCGTAGGCAAATCAAAAAATACCAATATCCACAAAACGCGATATTGGTTTAAGCGCATTTCCTAAAAAGGTAATTCGGGCTCGTCTGTACTTTTTTTATTTCCATAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCATTCTTTGAACTACTGATATTTACAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.57%AT] # Reference repeat match prediction: F [matched GTTGTGATTTGCTTTCATCCTTTGAACTACTGATATTTACAACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.10,-0.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [66.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //