Array 1 25757-30711 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJGZT010000019.1 Psychrobacter immobilis isolate Psychrobacter immobilis 1159, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================================================================================= ================== 25757 28 100.0 32 ............................ AATGAGCAAGCCATCGAGCTATTAGACTTGCA 25817 28 100.0 32 ............................ AGCAAAGAACATTGTTCTGTATTCGCCGTTAC 25877 28 100.0 32 ............................ ACCAAAAACGCGCTAATGGAATTAAAAACAAG 25937 28 100.0 32 ............................ ATTCGATAGTAAAAAAGCACAGAAATTAGCTA 25997 28 100.0 32 ............................ GCTGACTAGCGAGGGTTATGTTGATGATTACG 26057 28 100.0 32 ............................ TTAGACGAGGCAAGGCCGATTGGCCTACGAGA 26117 28 100.0 32 ............................ TGTGCTTGAGGCGTAAAGCCTAAATAGCAACT 26177 28 100.0 32 ............................ ACAAGACGGATAACGTCGTCACTAAGCGGTCT 26237 28 100.0 32 ............................ GATCAAAGAAATGCTACGCGCTATTGGTGTGG 26297 28 100.0 32 ............................ ATTTAGCATCTAAGGGCTTTGAGTGATTGAAA 26357 28 100.0 32 ............................ TCATCAAACTCAGTACGTATCACCGGCAGCCT 26417 28 100.0 32 ............................ ACTAGCTGAAACCGTCTATGATTCGGTGTCAT 26477 28 100.0 32 ............................ AAACATGACGTTTTTGCCTTACAAGTCAGTAG 26537 28 100.0 32 ............................ GTCTGCATTGCTTTAGGCATTCGTGGGTCGTA 26597 28 100.0 32 ............................ CATTGCATGGCTGCATTGATGTAAATATCTTC 26657 28 100.0 32 ............................ TAAACATATCTCGCCACGCTTGATAAGCTCTA 26717 28 100.0 32 ............................ TCTAAAATAATTGACGCTAACACTATCGAGAT 26777 28 100.0 32 ............................ ATACAACGACACGTTAAGCAATTAACACAAGC 26837 28 100.0 32 ............................ TGTCAAATCTATCAAGTCAAGCTTTGCGTAAA 26897 28 100.0 32 ............................ TCGTATGAGTGCTGTGGCTTTTGCTGATGTAC 26957 28 100.0 32 ............................ AACAAACAAGTAACAAAATAAAATGATATTTT 27017 28 100.0 32 ............................ CGTATATGAAACGTCCTGAAATGGCGATTGAT 27077 28 100.0 32 ............................ TCTTGCAATTTGCGCTAGATTAGAAAAGCCAT 27137 28 100.0 32 ............................ AAAAAAGAAAAAAACGATTAATGCTCGTCAAG 27197 28 100.0 32 ............................ AGCTGAAAACCAAACGACTGAAGAAGAGGTGT 27257 28 100.0 32 ............................ TATCAGCCCTTTCAAGTAAAGACCTTCAGAAT 27317 28 100.0 32 ............................ GTATGAGTGCATCAGCTCTGTTATTGATATAT 27377 28 100.0 32 ............................ TCAGCCCATAGCGTTGCAGCATTAGCTCTATC 27437 28 100.0 32 ............................ ACAGCAATAAGTGCGTAGCGAATAAGTGGCGT 27497 28 100.0 32 ............................ ATCCAGCAGCCGTGAATAAATGAAACTATCCC 27557 28 100.0 32 ............................ TTGAGTTAGATGATTCGCCTATGGCGGATATT 27617 28 100.0 32 ............................ TTTAACTCTTAATGTTTGTAAGTCCATGATCT 27677 28 100.0 32 ............................ CCTCATAAAACTTTATGAGATCGACACCTGCT 27737 28 100.0 32 ............................ TTAATCCGTTTTAAACTCTCATTCGCCGCTTT 27797 28 100.0 32 ............................ GTGAATAAATGAAACTACGCCGCACCGAACAA 27857 28 100.0 32 ............................ GCTAGTTGCACCTACTTGTAAATATATACTGG 27917 28 100.0 32 ............................ AAGACTTCGTACCCTCTGTTTTGTAAATCGGT 27977 28 100.0 32 ............................ TCCTAGTGAGAGTGATAAAGATAGCGGCTTTG 28037 28 100.0 32 ............................ TTTATCGCCCTTATCTCCCTTTAGTGCTGCTA 28097 28 100.0 32 ............................ GTATGAGTGCATCAGCTCTGTTATTGATATAT 28157 28 100.0 32 ............................ TTGTTCATTGAACAAACCACTATCAGCATAAC 28217 28 100.0 32 ............................ TTTTGCACAAACATGGCCATAAAGAAAAGACG 28277 28 100.0 32 ............................ AACGGGATTACTCCACTCAAAAACCCTGTTAT 28337 28 100.0 32 ............................ TACAAACAGAGTTTACCTTTTCACGCTCCCAA 28397 28 100.0 33 ............................ CACTCTTAGGGCTTAGACGCGTATAGAATGTCG 28458 28 100.0 32 ............................ AGTAGCGCTTAGCCCAGACGGTGAGCGCCCAA 28518 28 100.0 32 ............................ GATTAAAAACTTTGCAAAAGGCGGATAATTAA 28578 28 100.0 32 ............................ AATATGAGCGACGGACACGGCAAACAGTGGAT 28638 28 100.0 32 ............................ ATTTGCGGGGTCATGCCGTTGATGTTCTCAAC 28698 28 100.0 32 ............................ TCCGCTGTATGTACCGTCACATGACCTAGTTT 28758 28 100.0 32 ............................ TACGATTTAGCAGGGATGCTATGAACTATACT 28818 28 100.0 32 ............................ GTATGAGTGCATCAGCTCTGTTATTGATATAT 28878 28 100.0 32 ............................ TATCACGATTAGCGGTAAGTACCTCGACAAAG 28938 28 100.0 32 ............................ TGAACGAACGCGCCTGGTGGTGTCTATTTTTT 28998 28 100.0 32 ............................ ATAGTAACAAGCTTCTCTTTCTCTTTATCTAC 29058 28 100.0 32 ............................ AAAACACAGCCAATAGGCTAACAATATAGAGA 29118 28 100.0 32 ............................ ATTGTCCAAACTTATAACGGTAAGTTTCATTT 29178 28 100.0 32 ............................ ACCAGTAAAGAGCGATGTTAAGGCGATGGGCA 29238 28 100.0 32 ............................ TTTAGGAGTGGCAATAGATGGCTACCAAAACC 29298 28 100.0 32 ............................ TGCCAGCGTCACCGCGACGTTTTTGAAATACG 29358 28 100.0 32 ............................ TTCGACTTCAACAACCGACACAAGGGCAAGCT 29418 28 100.0 33 ............................ TTCAGGATATGAAGCGATTAACCATGTTTTGTT 29479 28 100.0 32 ............................ GTCAACTGATACGATAGGAGTTATGCTGCCCT 29539 28 100.0 32 ............................ TTATAAACCTACATCGGCTGCTGTTAGGGGTT 29599 28 100.0 32 ............................ CAAATCTTGATACCGTTATCATTCAAAAACTT 29659 28 100.0 32 ............................ AACATTTTTCGACACAAGTCACTACCCGTCAG 29719 28 100.0 32 ............................ TGATGATGATGCAACCGAGAAGTTAACGACTG 29779 28 96.4 32 ........................A... TAAAAAAATATCAGCGCTGCGTTGATTGACTA 29839 28 100.0 32 ............................ AAACACAATAACAGCAGTGGTAATATTTGGTT 29899 28 100.0 32 ............................ ATGATTCCATTGATGGCAGGGTAAAGAGCGAC 29959 28 100.0 32 ............................ TAAGAGAGTACATAGTCTCAGGAAATGCTGTT 30019 28 100.0 32 ............................ TAATATTAAAAACGCTACCCACAAAAACCCAT 30079 28 100.0 32 ............................ AAATAACGCCCACAAAAAAGCACCACTCAACC 30139 28 100.0 32 ............................ TAAATCACCACGCCTTGCTGCTTCAAAAACAT 30199 28 100.0 32 ............................ ATATAAGACGACACGGCTGAACGCGCTTTATT 30259 28 100.0 32 ............................ AAAGAGATTTACGCCTTTCCAAGCAAGGGCAG 30319 28 100.0 32 ............................ TTAGTCTGGACAACGGTGGCGGCTTTACTTAA 30379 28 100.0 32 ............................ TCGTAAATCTCAATACCTTTCTTATCGGTTAA 30439 28 100.0 32 ............................ TTTTAAGATTAAGATTCTAAAAATTATAGGAT 30499 28 100.0 32 ............................ TTGTTCGAGTAGAAAGTGCAACCAATAAAATT 30559 28 92.9 97 ..........................GC AGCGTTAAAAAATTGTACTGCAATTTTAGTTGTGCAAGGAAAATCCTTTAAATAGAATTTTCAGAAGTTATAATTCCAAACGCAATTCGGAAAAATG T [30583] 30685 27 89.3 0 GA..-....................... | ========== ====== ====== ====== ============================ ================================================================================================= ================== 82 28 99.7 33 CTTCATCACCGCTCAGGTGACTTAGAAA # Left flank : TCAAAGGCATCAAAGACGTGCCTATAGATAAAATAACGGGCTACGTGAGTGTACACCGCTATCGTTTTAAACCGATAGAGGTACAAGTAGAATCTCTAGCCAAAAAAATGGAGATTAGCAATGACGAGGCAATGGCGATAGTTGTTAAACGCAAAGCTGAATTAAAACTGCCTTTTATCAGAATGTTTAGTGAAAGCAATAAAACCCATTATCCATTGCAAATTTTACAACAACCTAGTAAACAGGACGTAACTGGTGGTTTTAATGTATACGGTATGAATGGCATGCGCGATAACGTTACTGTGCCGCAGTGGTAGTAGATAAAGTTAAAGGGTAATGACGAATTACCCTTTAATTGGGTATAAAAACCCTTTTTTTTAATCTATTTAAAAACTTGCAATAAAAACAAACAGTTATGACAATATGAAAATTGGAGGGTAAATTAGGGTATTTTGCCTTCCAAGCCTTGCTGTAGCTGAATTTTTTGAGGTATAATTCCT # Right flank : AGCTATAGGTGCTGAGTGAGAGACTGCCATTTACGGGTTTCATCACCTATAGGATGCTTAAAAATAGCGGGGTTTAAAGTAGTTGACAGATGTCATTGCCTAGAAATTCGATTATAGTAGATATTTATAACCATTATTTAGACAAACTAAGGGATTAAACCATGAAAACACTAGGATTATGCATTGTAGCAGGACTGGGATTAAGCGCTTGTGCTATGACAGGTAATACAGACCAAAATAATAATGCCAATAGAGTCGTCACTCAATATCCTGTTGAAGCTGCCATACTAAACATCTACACCAAGCAACGCAGTGATAAGTTAATTGCCACGGTTGGGAATCAAAGTGTATCAGCAGAAATTCAAGTCACACCTAAAGGCAGTATGCGATTCAATAATAAAGCTGTACAAGGTGCCGAAGTAAACACTATCAATAAAGTGAATGATCGAATCACTGATCAGTCAGTCGCTATCAATTACTTTACCCTGAACCCACTCGTG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCATCACCGCTCAGGTGACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched CTTCATCACCGCTCAGGTGACTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.70,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //