Array 1 36115-31994 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAIVJ010000008.1 Tabrizicola oligotrophica strain KMS-5 contig00008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 36114 29 100.0 32 ............................. GATTGTGGGGCGGGGGAAATATCTTCCGGTTC 36053 29 100.0 32 ............................. CGACGGCAACACGGCGAAACCTGCCGCAAACA 35992 29 100.0 32 ............................. GATCGCGTCCTTGTTGCGCACGATCAGGTCGG 35931 29 100.0 32 ............................. TGATCGACCGCAGCGAGGTGGCGGTGCAGGGC 35870 29 100.0 32 ............................. AACTTCCTGCAGAACGCGGCCCGGCCTGATTT 35809 29 100.0 32 ............................. GGCCACCATGCGCGACGCCTGCCACGGGTGCA 35748 29 100.0 32 ............................. TTCTCGCCTTTGCCGTAACGCATGGTTCCTTC 35687 29 100.0 32 ............................. CCCGTTACCGCTGGTGCCGAACAGAATAGCCC 35626 29 100.0 32 ............................. GTTGAGGATGCCAGCCCAGAGGAGAGGGAAGC 35565 29 100.0 32 ............................. GGCGGTAGGAGTGAACGTGAGTATGTTCCTTG 35504 29 100.0 32 ............................. TGAGGCGAAACTCGCGATGTAGGGTTTACATG 35443 29 100.0 32 ............................. GGGCGGGCTGTGCGCTACACGCGGCAGTATTC 35382 29 100.0 32 ............................. ATGATCGGGCGGTCAGCCATGGTTGGCCTCCA 35321 29 100.0 32 ............................. GAACTGACGATGCCGATGGAGGAAATGCAGCT 35260 29 96.6 32 ............................T GAGCATGGACTATCAAACTCCCCGCAATACGC 35199 29 100.0 32 ............................. CTGGCTCTGTCGGATGATCCCGGCACGGTGGC 35138 29 100.0 32 ............................. AAGTCAGCGCGGCATCGGGCATTCCTCGGGCT 35077 29 100.0 32 ............................. CCTTCCTGAAACCGTCCAACAGCTGCAGCATA 35016 29 100.0 32 ............................. AATGAAATCACCTGGTAAACATCCCCGATACC 34955 29 100.0 32 ............................. GCGAGGTTGTTCGCTCCGACATGCTGGCCCAG 34894 29 100.0 32 ............................. ATCCGAGAATTCCGTCGATTGCGTATCCGGCA 34833 29 100.0 32 ............................. CGACAAGGCCGAGGCCGAGGCGCTGGTCAACG 34772 29 100.0 32 ............................. ATCATCGAGCAAGCGGCGGCTGACCTGCCGGC 34711 29 100.0 32 ............................. CCGCTGGCGCTGATCCGCCGCACCACCAGCGA 34650 29 100.0 32 ............................. ATCACCTATTCCGGTTGTGCCACAGCGCTGAG 34589 29 100.0 32 ............................. GTAGGTATGGCGGCGCAGGACCGACGAGAGTG 34528 29 100.0 32 ............................. CCCGCCGCGATCCATTCGCCGATGGTGCCGAA 34467 29 100.0 33 ............................. GCACAGGGTCAGGCGCGGTCGGAATGACCGCAG 34405 29 100.0 32 ............................. ACCTCGTTCTTGGCCAAGGACACGCTGACGCT 34344 29 100.0 32 ............................. TATGCGGCGGAGGACCTTGCGGCGGCGGTGAC 34283 29 100.0 36 ............................. TGACGCTGGCCGGGCTGGCTGGCCCGCATGGCAAGA 34218 29 100.0 32 ............................. AGTGCCTCCTTGACCTGATCGCCGCCGTCGAG 34157 29 100.0 32 ............................. CATCACAGGGACCAAATTAATACCACGCGCCG 34096 29 100.0 32 ............................. TTGGAGGGCCGTTGCTGTGAAGCCTCTCCCCT 34035 29 100.0 32 ............................. CTGGACCCGGCGGGCACGGTGCATGCGCCGCT 33974 29 100.0 32 ............................. TTCGGTATCTCGTGGCGGGCGAATATGGCGAG 33913 29 100.0 32 ............................. CGTCATTGACCGGCTTGCCAGCATCTTCCGGC 33852 29 100.0 32 ............................. GATTTGGCAGACTGGCAGGCGCGCGCCAGGCA 33791 29 100.0 32 ............................. CGGACCTACGTGAACTACGGGTTCTCGCGGGC 33730 29 100.0 32 ............................. GCGAGGACCGACGAGGACAACTCTTGACACCC 33669 29 100.0 32 ............................. CCACCCCGTCGTTGGGGGCGGCGTTGGGGCGG 33608 29 100.0 32 ............................. ACGCCATCCAGACGCCAGCATCGCTTGTGGTG 33547 29 100.0 32 ............................. CGCCGGGCCAGAGGCTGTTGAAGGCCGGGCTG 33486 29 100.0 32 ............................. GGCTGCGAATTTGGCCTCAGCCGTTTTGCTGC 33425 29 100.0 32 ............................. GCCCCGCTTTTGCTCGAGAATAACGGGTCGAT 33364 29 100.0 32 ............................. ATCACCTATGCCGGTTGCGCCACGGCGCTGAG 33303 29 100.0 32 ............................. CTGCGGGCCATAGTGTTTCACCGCCGCCGCCC 33242 29 100.0 32 ............................. TTGCCGGCCGCATCGCGGACCGACACGCCAAG 33181 29 100.0 32 ............................. GCAATGCTGCGCCGCCGAGGCTTGCCCCCAGC 33120 29 100.0 32 ............................. CTAACGGGGAATACGTCAAGTTTGCAGACGGG 33059 29 100.0 32 ............................. CGCGATCACCCTTGCCATGAAGGCCGGGCTAA 32998 29 100.0 32 ............................. CGGGCAGGGCGCACCTGTCCGCATCTGGATCA 32937 29 100.0 32 ............................. GGGACAAGCAACATTTCAACCTTCCGAAAAGG 32876 29 96.6 32 ............................A TGCTCGGTTTGACCGCGTAAGGGGGCCTGAAC 32815 29 100.0 32 ............................. CCCAAAACCTGACCGAGCATGAAGCGCTGATG 32754 29 100.0 32 ............................. TCCGTGCAAGTGGGAAATTGATGGGCGTGTGT 32693 29 100.0 32 ............................. TCTTCATCAGATGAACCCCATCGCTGCCTGCA 32632 29 100.0 32 ............................. GACATCGAGAACCGCGACTGGAAAACCGGCTT 32571 29 100.0 32 ............................. TTGTATAGCCAGCGCCGATAGAGCTATCATTA 32510 29 100.0 32 ............................. CGCGTCAGCATGGCCGATCTTGCGCGCATGAC 32449 29 100.0 32 ............................. ATCACGACCAGCGGGGAGCGGCTTATCCGCAT 32388 29 100.0 32 ............................. CGTGTAGATCGCCTGCCCCTCGGTGGCGATGC 32327 29 100.0 32 ............................. GGGGGAAACCAAATGACCTCAGCCGACAAAAC 32266 29 100.0 32 ............................. CCTTGCCATGCGGCCAGACGTGGCGGCGAAGA 32205 29 100.0 32 ............................. ATGAATGAATACAGTGTCTTGGCTATGCCTTT 32144 29 100.0 32 ............................. GCGGCCAGAAAATCGGCTGACGCCAAGTATCA 32083 29 96.6 32 .......................A..... AGTGCGTCCGCGCTGAAACGGTCTTGGGCCGC 32022 29 93.1 0 .....................C...C... | ========== ====== ====== ====== ============================= ==================================== ================== 68 29 99.7 32 CTGTTCCCCGCCCACGCGGGGATGATCCG # Left flank : CCTTCTGGCCCGCATCATCCCGGCCATCGAAGAGGTCCTGTCCGCCGGCGACGTCCCGCGCCCAGATCCGCCGCCCGAGGCCATGCCGGTCGCCTTCGAGGCGGGCCAGAGCGGCGATGAGGGCCATCGCGGATGATGGTCGTGGTCGTCAGTAACGCCCCACCCCGCCTGCGCGGCAGGCTTGCCGCCTGGCTGGTGGAACTGCGCGCCGGGGTCTATGTCGGCGACTATTCCGCCCGCACCCGCGAGATGATCTGGGAGCAGGTGCAGGCCGGTCTTGAAACCGGCGATGCCGTCATGGTCTGGAAGGCCCCGACCGACCAGGGCTACGACTTCAGAACCCTTGGCAAGAACCGCCGCATGCCTGTCGATTTCGATGGCCTGAAACTGGTGAGTTTCGCGCCTCTCGACACCCCCTGACACCCCCAAACTCCGGTTCCCGCATCGGTGCGCTCTTTGACATTGTGAAAACCCTTGCAGAACAATAAGCTGCAACAAGA # Right flank : ACCGATCTCAGTTTCGACGACCGGTTCATTATCTGTTCGCCGCCCACGGTAGGGCAGGAGGGTCTTTGAGAGGTGGCGCCGTCGGTTCTTTGGAACCGGCATTCGGAAGAATCCCAGCATTATCTCGACCGTCTGTGACCTGTGCGCCGTCATTGACGCCCAGCCCAATGGAGCGGTACCACCACCTCGGCGCCGACGGTCTGTGCGCACTGCTTCGGCAAGGCCCGCGAGCGGAAACGGACCGAATGCCCTAGGGTCAGGACCCATTGATTATCCGCTCGTGCCGTGATTCAGCCTCCGGAAGGAGACCGATCAATGAGCAACCTTTTCTGGCTGAGCGAGGCGCAGATAGCGCGGCTGCAGCCCTTCTTCCCCAAGAGCCATGGTAAGCCACGCGTCGATGACCGACGGGTGTTGAGCGGCATTATCTTTATCAATCGCAATGGGTTGAGATGGTGCGATGCACCGAAGGAGTATGGCCCTCCGAAGACCCTCTACAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCCCACGCGGGGATGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //