Array 1 793280-790375 **** Predicted by CRISPRDetect 2.4 *** >NZ_QWDY01000001.1 Legionella pneumophila subsp. pneumophila strain WS17_LgA.1 WS17_LgA.1_contig000001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 793279 37 100.0 34 ..................................... TAGATATAAAAAGATTAAATCTTCTAGCGCACAT 793208 37 100.0 34 ..................................... TCACTACTCCTGAAGGTTATAATTTTTGCTATAA 793137 37 100.0 36 ..................................... TTCGAATACAATCCTAGTGTCTCTGTGTGAATTAAG 793064 37 100.0 34 ..................................... CAGGCACTGGTTCACTAGACACTGTAACATCTAT 792993 37 100.0 34 ..................................... CTACCAGTTAATCGTAACTCAATCTCTTTTTCAA 792922 37 100.0 34 ..................................... ATAGAATACATAAGTGCAAATTATTAAATGTTAC 792851 37 100.0 34 ..................................... TGAATGTAGAAACCAGATGCCACGAATTATTAGA 792780 37 100.0 35 ..................................... TTTGTATAAACGTTCTGATATGACTTAGGTAATCT 792708 37 100.0 34 ..................................... CTAACCTGATTGCTCAACAAATAATGCTATTGGC 792637 37 100.0 34 ..................................... TCACTTTAGGCCAACGCCGATCCTCCGCTTCGAA 792566 37 100.0 35 ..................................... CTCACATCTTACCCTCAGGGCGGATATTGTGAATC 792494 37 100.0 33 ..................................... ATTAATAATATTTTAGAAGATTGGCACATAATA 792424 37 100.0 34 ..................................... TGACGCAAAGGATTTATTAAAAACGCCTTGTAAT 792353 37 100.0 31 ..................................... ATTTTACCTTTTAACACATATTGATAGGCGT 792285 37 100.0 36 ..................................... TCCATAACTGAAACGTCCTTATGCCTCAACATAATG 792212 37 100.0 36 ..................................... CTATTGCAAGCTAGTTTGATCGTGTTATTATAAGAA 792139 37 100.0 36 ..................................... TGACAAACGTTTGTTTTTTAGACACAACACTAAAAG 792066 37 100.0 35 ..................................... CCTGAAAACCCGCCACAACCCGCGCCAGACTTGAA 791994 37 100.0 34 ..................................... ACCAAGTCGAAACAACATACCGAGACCGTGTTGA 791923 37 100.0 35 ..................................... TACATTGTTACGTTCATTTCACTCAGTTTTTCATA 791851 37 100.0 34 ..................................... AGCAATAACCCAAAGTTTCGCGCGCGTGCGCGGG 791780 37 100.0 37 ..................................... TTATAACATCGGGATGGCGGTTTATTGGTTAAGTAAC 791706 37 100.0 34 ..................................... TTCTTTTTTCAGATTTCATTTCCTTTTCCTTGTG 791635 37 100.0 36 ..................................... TTTTTATCGTAAGCTTGATTAACTAGACATCTACTA 791562 37 100.0 33 ..................................... GTTTTAATTTAATCATTATTGCTTCCTTATTAA 791492 37 100.0 37 ..................................... TAAGATATTGGTCGATTGTTTGCAAGACGTCATCAAA 791418 37 100.0 34 ..................................... CTAAATCAGCAGTCATCAAAACCCATATGATTGT 791347 37 100.0 31 ..................................... TTCTCAGAATGGGAACGTTACACATCATATT 791279 37 100.0 34 ..................................... TTAAGTATACGTTTCTTTGGGCTATTAGTTCTAA 791208 37 100.0 36 ..................................... TTCTCATATTTTAAAACAATAGAGTAATTCATTTTA 791135 37 100.0 35 ..................................... AATCTTAATTTATGCGCCTTACCTTCTGCTTCATC 791063 37 100.0 36 ..................................... TATACTTAGACAATATCATCATTTCCTATGTTTCGA 790990 37 100.0 36 ..................................... GCTATTCCAGATAGGTAGTTGTTTAGAGCATTTTGT 790917 37 100.0 35 ..................................... TTCGATACTCCTTAGCGGTACTTGCTAAAGTAGTT 790845 37 100.0 35 ..................................... AAATAATTCTTGTGACTCACGTGCCGCCATTTGAA 790773 37 100.0 36 ..................................... TAGGAATTGATTGGGGTAACGCCATCGCCATAGAAG 790700 37 100.0 33 ..................................... TTACTTCATGACCCGGACATTTTACTAAAAAAT 790630 37 97.3 34 T.................................... TCCTATACCTTGTCACAATTTCCTCATATGGCTC 790559 37 100.0 36 ..................................... CATAATTGGGAATTGGTGTGAAATGCTCACCGTCCG 790486 37 100.0 38 ..................................... TTAATTGCGCCAGAAACAGCACCATTTATGGTTACAGC 790411 37 86.5 0 .......................TT...T.A.....T | ========== ====== ====== ====== ===================================== ====================================== ================== 41 37 99.6 35 CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Left flank : TCTTTTGCATCAAAAATTAGTTTAGGTCAAAAGATGCAACTGACCGCCTATGGAATGCTTTCCGAACTGATTTTTGAAAAACCATGTACCAGAGGCTATATTATTACTGGTGAAAAGGCCAAAGCCAAATTAATAAAAATTGACGAAAAATCAAAGTTCAAAGTGATTGAAATTTGTGCTAAAATAAAGAAAATTTTTGGCACAGAAACATTACCATACAGCACTGCTAATGGACTTCAATGCATTCAGTGTGAGTTTCTAAATCACTGTAACGATAGATTTTGAAATCGTTATATGCTCGCTATTAAGACGAGCATAGAAAAACGATTCAATCTTTAATTTTGTTGATTTCAGGGTATCGAAATTTAGATGATTTCTAATTTAATTATTGCCTTCTTTTTCGAAAAATCAAGCCTAAATAATGCAATTTGCTATTTTTCGAAGAAAACCACTTTTAATTCCTCGTGTTTCTTTAAAATAAACAAAGAGTTAAAATTGCC # Right flank : ACTCCATACTTTATTCTCTGTATACTATTATAGTAAAAATCCATGGGGTATTATTTTATATAATTAAACAGAATTTAATTTTGTTGTATTTTAATTTCTTCGACAAACATCAGAAAATATAATCGGTCATTTTTACCAATTATTTGTAAATGTTAGATGCAGTTTTAGGGGCACAATAGGTCATATTTGGTTATATTTGCTTTTTTTCATCTTATTTATTTTATAATTAACTTGATAATTATAAAGTGCTATTTTACTCTGTTGCTTTTTCTGACAATACCTGTCTTTACAGATTATCTTTGTAACAAATTTTCTTAATTTAACCTCAGCTCGATATAAGAATAAGGTTATGTGATTGATGATTCAAAAGCCAAACCGCAAGTCAAATTAGTACGCGGTCAACTTCAAATTATTGCATCAAGGAATATAGAACATAGACGGCAGCTGTTGTCAGATTGGTATAAGCAGAAAGCTTTTGAAGTTTTTAGCAAAAGGTTAGA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAATAATCCCTCATCTAAAAATCCAACCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //