Array 1 787853-788602 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP014623.1 Pseudomonas chlororaphis subsp. aurantiaca strain StFRB508 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 787853 28 100.0 32 ............................ GGTCACCGTGATGTTCTTCTCCTTGAACTTGG 787913 28 100.0 32 ............................ AAACTGTTGAACCGGCTGGAGGCCAACCTCGA 787973 28 100.0 32 ............................ AGTCGGCGCCGGTACCAAGAAAGTCGTCATCG 788033 28 100.0 32 ............................ TGGCGGTAGTCGTACCAGGAACCGCCCTCCAG 788093 28 100.0 33 ............................ TGCAGCGCGGTTTCCAGGGCGCTACGAATGTCC 788154 28 100.0 32 ............................ TCACTGTTCGGGTCATCGATCCGAGCCGTCAA 788214 28 100.0 32 ............................ AACACGTCGTCCTGGGCGCCCTGGCCAGCGGA 788274 28 100.0 32 ............................ AATCCGACCATCCTTCTCAGCGACTTTCGCTG 788334 28 100.0 32 ............................ GTTGCACGATGGGCCACGGCTCATGCCGTTCA 788394 28 100.0 32 ............................ TGGGCTTCTACGTTGCCAAAACCACCATGATC 788454 28 100.0 32 ............................ CATTCCAGGACACGGTTATGCAGACGCTCAAG 788514 28 100.0 32 ............................ TTCCCCGCGCGGGGAGGCCCCGGCTTTTCTCT 788574 28 92.9 0 ......................GC.... | T [788600] ========== ====== ====== ====== ============================ ================================= ================== 13 28 99.5 32 GTTCACTGCCGAATAGGCAGCTTAGAAA # Left flank : AGGCTCGTTGCTCGCTGCCTTGAAACCCACCGCCGCAGGTCCTGCGGGTAACGATTCGCTCTTCACCGTCCGCCCCGGCATCAGCGCCGAAGAAGCGTTGCTTCACGTTTCCATGCTGCTCAAGTCCGCCGAGGAGGTTTCCGACGAGATCACCGAGCACGCCAGCGGTATCGAGCGTGGCCTGATCTGGTCGCTGGTGCATTCCGTGGAGATGGCGCGTGGTGTGGTGGATGCCTTGCTCGACGGTAATCGTCTCTGATCGACAACGGCCCGCTGGTCGCGATCCTCCTTGAGATTCGCGGCTGGGCGGGCCAGACAAAACGGGTCCATGACGCTAGTCCGAGCGCCGGTGTTCTCTTCCCTCGCGCTGACCCTTTTTTCCGAGCGGATTTTGGCCCTATGTAAATCAAACACTTACAAAGGTCTCTAGAAAGAGGGGTAAATATGGTGTTCAGCATGATTTCTCTTTGAAATCATGGCGCTATTGGGATATCTGTCTA # Right flank : AACGCATTGAAGGTATGGCCCAACTCGCTTTAACGACTGGCGTTAATGGTCGGTAGAGTGGGAACTCGCCTCGATCCCGGTCGGGGCGTTTTTTTGTCTGTAGAGCCGTAAGAGGCGAGCTACCAAAACAGCCACGTCATCAAAGTTCAGAATCGTCTTACAGCCTTGTCTTTCGCCACTTGCTAGGTTCGGGGAGTTGCAAAGAATCAGAGCCTCCCTCACGGATCAGTTACCGCAAGGATGATAAATGTTCCCCTCTGCTCGCCAGGGCGACAAACACGTCTGCCCGCTTCCCGGTCACGGTACGACACCTATTGCTTGCGCTTCTGGTGACATCAACATCAACTTCATGGGGGCCGCCCGAGTCGGTGACATCTGCGGTTGTGGCGCGGTTATTACCACGGGGTTTCCCTCGATCATCTTGAACGGGCGCCCAATGGCTCACCTGGGCAGCCCTACCAGTCACGGCGGAACGATCATCTCGGGCAGCCCCGATACCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //