Array 1 97849-96958 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAAHZD010000005.1 Streptococcus pyogenes strain 31118V3S1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     97848	    32	 100.0	    35	................................	TGACATCTATAATCCCTAGCTTTCCTTTGATACGA 	
     97781	    32	 100.0	    35	................................	CAGATATTAAACCATTCTTACCACCACCACGTCCC 	
     97714	    32	 100.0	    33	................................	TGTATCAACGCAGCCGACAAATACACATTTTAA   	
     97649	    32	 100.0	    34	................................	AATCTCATAAACAGGGGTATTTGATTTGAGGGTC  	
     97583	    32	 100.0	    34	................................	GATATGATACAGACGTCTGTCCTTGTCATTCAAT  	
     97517	    32	 100.0	    34	................................	AAGACGTGTATAAATTACACACAATCAATACTAA  	
     97451	    32	 100.0	    34	................................	AAGTCATCACGTAAATTTTGCAACGCTTCATCTG  	
     97385	    32	 100.0	    33	................................	CATCTAAAGCATCTGATCGGTTTTTAAGCTCAT   	
     97320	    32	 100.0	    33	................................	TGTATAAATTGCGAAAAGAAAAAGGAATTTCAC   	
     97255	    32	 100.0	    34	................................	ATTTAGTCGCCAACTTTAACTATGATCAAACTTG  	
     97189	    32	 100.0	    36	................................	TCTGAAGTTAAGACCTTGTCCAGAAGCCAAACCAAG	
     97121	    32	 100.0	    33	................................	GTCGATAATGGCTTGATGATCACCTGAGAAAGT   	
     97056	    32	 100.0	    35	................................	TCCATTTTTTACTTTCTCATGTGGCAAAACATAAT 	
     96989	    32	  96.9	     0	...............................G	|                                   	
==========	======	======	======	================================	====================================	==================
        14	    32	  99.8	    34	GTCTCACCCTTCATGGGTGAGTGGATTGAAAT	                                    	       

# Left flank :   AAGGCTATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTCACTTATGATGTAAATACGGAAACACCTGCTGGTAGAAAAAGATTGCGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAGCACCGCTTAACACAAATCATTGATGAGAAAACTGATAGTATTCGCTTTTATTTATTGGGGAAAAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAATCTCTTGTGCGAAGCTAGCTTTCACAGAAACACCTTGCTTGCTCGCGCAAAAATAACTTAAAAAAGAAGCGAAATGGAGATAAAAAGGCTTAAAACACTTCTATGTGTGCCATCCGTTTCTCTATAAACTGTGTCATTTGGCGCA
# Right flank :  ATGAACCCGATCTCTCTTTTAATGAGGTCGGGTTTTTACATGCCTTTAGTCAACCATTTATCTGATAGCGTATCAAATTCAAGTTTTTGCATGTTCTAGTCTATGGTTTGCGCCACTAGCTTTCGGTAAACTAAGGGTAACTTAAGAGAGGAGTTATTTATGACACTATCACTTGTATTAATGGTATCGGTTTTTGGGGCAGGCTTGTTATCCTTTTTCTCTCCGTGTATCTTTCCGGTCCTTCCTGTCTATTTAGGCATTTTACTGGATGCAGATGATTCAAAGACGATTACTATATTTGGTAAAAAACTCTATTGGTATGGCATTGTCAAAACTTTAGCCTTTATTTTTGGTCTATCTACTATTTTTGTGATTTTAGGTTACGGGGCTGGTTTTTTAGGAAATATCCTTTATGCGGTATGGTTTCGGTACTTACTGGGAGCCTTGGTCATTATCTTGGGGATTCATCAGATGGGCCTCATTACCATTAAGAGCTTACA

# Questionable array : NO	 Score: 9.25
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTCACCCTTCATGGGTGAGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         R Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:53.12%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-4.70,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : NA
//