Array 1 69204-68870 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHOP01000034.1 Acetobacter sp. DmW_125128 NODE_34_length_110131_cov_15.639820, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 69203 29 100.0 32 ............................. CCTTGGTGGCGCCCTCAATATGGGGATGGGCA 69142 29 100.0 32 ............................. ATACCTACAGCCTGACAGATCTGCTGCCTGAT 69081 29 100.0 32 ............................. GCGTGAGACAGCGCGTGGTGGCTGAGGAGGCT 69020 29 100.0 32 ............................. GAACACCCGCGCAGGAGAGAAGGCGTGAAACA 68959 29 100.0 32 ............................. GGAACCACATGGGAACCGCAGGAACCTCGCTA 68898 29 96.6 0 ...........................T. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : ATGTGCTGGCTGCCGGTGAAGCGGGGCCGCCACCAGTGCAGAAAGAGGCGATGCCCGTTGCGTTTGCTGATCCGAAAGGGCTGGGTGATGCTGGTCATCGTGGTTGAAAATGCGCCCCCGCGTTTACGCGGGCGGCTGGCTGTATGGCTTCTGGAAGTGCGGGCTGGTGTTTATATTGGCAGCTACGGGCGGCGTGTGCGGGAAATGATATGGGGGCAGGTCTGCGCCTATATTGAAGATGGCAATGCTGTGATCGCTTGGGCGGCTCCAAATGACGCCGGTTTTGAATTTGATACTTGTGGGGAGAACCGTCGGGTGCCGGTAGATCTGGATGGTTTGCGGTTAGTTGCTTTTGGTCGTGAAGCAGCTCTTCCGATGCAACCAGGCCCTGCTGTAATGACCCTTCCAAGACGGCGTGGAAGAGGGTAAAAAACAGTCATTCGTCTGGTAGATTCTTTGATAGTAAAATAATGTTTTAAAATCAATTGGTTCCACAAAGA # Right flank : GTGAAACCCTTACTCTAGTGGAAAAGGCATGGGGGTTACCGAGCAAGTGGGTAATCGGTATAGCCTTCTGCCCCCTGTGTGTACCAGGTTTGGATATCATCCTTATTCAGGGGAAGGTTATCTTCCAGACGGTGCACCAGATCCGGATTAGCTAAAAAAGGTCGGCCAAATGCAATGGCATCGGCAATACCGGTTGCGACCGTTTCAATCGCTTCGTCCCGTGTGTAATCCTGATTCAGAACCAATGGTTTTGTAAAAACTTTGCGGATCGGAGCATGCAGCTTCGGCTGATCGGTCTTGCCAAATGTGCCATGAGGGCCGGGCTCGCGCAGTTCGAGAAATGCAATATCGAGATCGTTCAGAAGCTTTGCGGCGGGTACGAAAACCTGATCGGGATGGGTGTCGATGCAGCCTTGTGTATTGCCATTTGGTGAAAGCCTGACAGATGTTCTGTCCGCGCCAATCGTGGCGATTACTCGTTTCGTGACTTCATGCAGAAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 88626-87926 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHOP01000011.1 Acetobacter sp. DmW_125128 NODE_11_length_112561_cov_14.787564, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 88625 29 100.0 32 ............................. GATCTCGTAGGTTGGCGAGAGAGGCCTTGGTG 88564 29 100.0 32 ............................. GGTATCCCGCAAATGGCAGCCGGATTTCAGGA 88503 29 100.0 32 ............................. GTCAGCGTGGCGCAGGAAGTTGACCAGGCACA 88442 29 100.0 32 ............................. GAATGCGCCATCAAAGCAGGCGTGCAGGCAAA 88381 29 100.0 32 ............................. GCCAAGGCGCTTTCAACTCTGGATGGTGGCAC 88320 29 100.0 32 ............................. CTGGCAGCCAGATCGCACCACAGCACAAATTG 88259 29 100.0 32 ............................. AGGAACGCGCTGGGAACAAATCCGCATTGCTG 88198 29 100.0 32 ............................. GCTGAGGCGCGTGGCAACGCTGTCATCATCAC 88137 29 96.6 32 ............................T TCAAATACCTTATATGATCTGAATTTATCTAT 88076 29 100.0 32 ............................. AAAATCTACACCAACGGAGACGCGCTGCAACT 88015 29 100.0 32 ............................. ATAGGCAGGAACACGAAACGGCGCACGCCACG 87954 29 96.6 0 ........T.................... | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.4 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : CACTTATACGAGTTGCAAAGCCGGGAGGGTACATTTGGCTTTCATCTGGGGCGTAAAGCACGTCCACTTTGCCGGTATTGCGTAGCAGGCCAGCATCATCTTCCAGCCCGCGCGGGTAATGCTGGAAATCATTGGTGTTGTTGAATTGGATAGGATTTACAAAAATGGACACAATTCGACGGGAGGCTTTGCCATCCAGCGCATTTATGAGTGAGATATGGCCTGCATGAAGTGCGCCCATGGTCGGCACAAAGCCAATAGTCTGGCCATCTTTCCGCCAACTGGTGCTGAGTGCTGCCAGTTCTGCTTTGGTTTTTACAATCTGCATGATGAATCCTGAACGCCAGTAATTTAGTCAGCCGGAATAAGTGTTCCAAACTGCAAAGTGCTGCAATGTATCCATGAATGTGCCACTATTCCAGAAGTGGCTGGGCCCTTTTATGGTTGGTGGATTCTTTGACAGTAAAATAATGCTATGGAATCAAATGGTTCCACAAAGA # Right flank : GCTGACTCCGTAAATAAGGTCGTGCTCGTTGGGTGTTCCCCACACGCGTGGTGACTAGCTTGAAACAAAACTTTAGGTAGAGTGAAAAGCTTCCAGTCTGTGCTATAAAGACGCATGTCTTACGCTGATTTTGTTCATCTTCGTGTTCATTCTGCCTATTCGCTTAGCCAGGGGGCCATTCGTGTGCCCGATATTGTGGGGCTGGCGAAGGAAATGCACATGCCTGCTGTGGGTATTGCAGATTCAGGCAATCTGTTCGGGGCGTTGGAATTTTCTCAGTATTGTACCAAAAGCGGTATTCAGCCTATTATTGGCAGCCAGATCGGCCTGCCTGCGCGTAATGACAAACCCGGCGCCCCCGCCGAGCCTGTAGTGCTTCTGGCACAGAATGAAGCAGGGTTGGCGAATCTCCAGTTTCTTTCTTCAGCCGGGTTCCAAAATTCAGATCCGGCAGACCCTTTTGTTTCTCTGGATTTGCTATGTGAGAAAGCAGAGGGGCT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //